Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is gluP [H]

Identifier: 167623086

GI number: 167623086

Start: 1401086

End: 1402399

Strand: Direct

Name: gluP [H]

Synonym: Shal_1152

Alternate gene names: 167623086

Gene position: 1401086-1402399 (Clockwise)

Preceding gene: 167623085

Following gene: 167623089

Centisome position: 26.81

GC content: 46.04

Gene sequence:

>1314_bases
ATGACAGCAACGACTCAGGCTCAAGCTAGCCCTAAGAGCAGTTTACTGCCTATGACCATTATCGGTGTGTTATTTTTTAT
CTTCGGATTTGTGACTTGGCTTAACGGCTCGCTAATCCCTTTTCTTAAAATCATCTGTGAGCTTAATGAATTCCAAGCCT
TGTTTGTGACGTTTGCTTTTTACATTGCTTATACCGTGATGGCTCTGCCGATGTCATCGATACTTAAAAAAACTGGCTAC
AAAAACGGTATGGCTATTGGTTTGGCTATTATGGTTGTCGGCTCATTACTGTTTATCCCAGCGGCGCAGAGCGCAAACTT
TACCCTATTCCTTGGTGCTCTGTTTGTATTAGGTACGGGCTTGACCATTTTGCAAACCGCATCAAATCCTTATGTAGTGC
ATATCGGCCCTAAAGAAAGTGCCGCGATGCGAATTAGTATCATGGGGCTTATCAATAAAGGTGCGGGCGTTATCGTGCCA
ATCTTGTTTACTGCATTAGTGCTGTCAGGCTTTGAAAACTTCACCGCAGATCACTTAGCGGCATTGAGTGAGGCTGACCG
CCTAGCACAAATTAGTGAGTTATCTTCAAGATTGGTTATGCCATACATCTATATGGCTGTGGCGCTGACTTTCCTAATTG
GTTTAGTCAAGTTCTCATCGCTTCCAGAGCTTGAGTTTGAAGCGGCAGAAGATCATCAAGAAAAAGGCAGCATTACTCAT
TTCCCTCAGGTGATCCTTGGCGCAGTCGCCTTGTTTGCCTATGTCGGTGTGGAAGTGATTGCCGGTGACACTATTGGTTT
GTACGGTGAAAGCTTAGGGGTTCATAACTTTGCCTCACTAACGTCTTACACCATGGTGTTTATGGTATTTGGCTACATTA
TTGGTGTGACCTGTATTCCTAAGTTCATTAGCCAAGAGAAAGCTTTGCTTGGCTCTGCAATCGCTGGGATCCTCTGTATT
GTCGGTGCGGCGCTAGGTTCGCGTGAAAGCACACTGATGGCCGATATCCTTTGGGGCTGGAGTGGTATTCCTGTGATCCC
TAACACCGTCACCTTTGTCGCGTTAATGGGATTGGCACATGCACTAGTCTGGCCTTCAATTTGGCCTCTAGCACTAGAGG
GCCTAGGTAAGTATACGGCTCAAGGCTCGGCACTGCTGATCATGGGGATCTCGGGTGGCGCAATACTGCCGCTAATTTTT
GGTAAGGTAGCCTATTTTGCTGACAATACTCAGGTTGCTTATTGGGTCGGTCTGCCTTGTTATCTGTTCATCCTGTTTTA
TGCGCTAAAAGGCCATAAGATGCGTAGCTGGTAA

Upstream 100 bases:

>100_bases
AGATGATAAGCTGCTTAGGTAAAGCGGTAACAATGAAGGATGGGGTAGCAGTTTAATCTGGTATCATAAAATTAATTACT
ATAAGAAGCAGGTTTAATAC

Downstream 100 bases:

>100_bases
ATACTCGACACAAGCTCTATTTTGATTGGAGCAGTTATAAAGGAGCCTAAGGGCTCCTTTTTTGTTTTTAGTCATGATAA
ATAGAGAAAAGCTAAGACGG

Product: glucose/galactose transporter

Products: Proton [Cytoplasm]; L-fucose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MTATTQAQASPKSSLLPMTIIGVLFFIFGFVTWLNGSLIPFLKIICELNEFQALFVTFAFYIAYTVMALPMSSILKKTGY
KNGMAIGLAIMVVGSLLFIPAAQSANFTLFLGALFVLGTGLTILQTASNPYVVHIGPKESAAMRISIMGLINKGAGVIVP
ILFTALVLSGFENFTADHLAALSEADRLAQISELSSRLVMPYIYMAVALTFLIGLVKFSSLPELEFEAAEDHQEKGSITH
FPQVILGAVALFAYVGVEVIAGDTIGLYGESLGVHNFASLTSYTMVFMVFGYIIGVTCIPKFISQEKALLGSAIAGILCI
VGAALGSRESTLMADILWGWSGIPVIPNTVTFVALMGLAHALVWPSIWPLALEGLGKYTAQGSALLIMGISGGAILPLIF
GKVAYFADNTQVAYWVGLPCYLFILFYALKGHKMRSW

Sequences:

>Translated_437_residues
MTATTQAQASPKSSLLPMTIIGVLFFIFGFVTWLNGSLIPFLKIICELNEFQALFVTFAFYIAYTVMALPMSSILKKTGY
KNGMAIGLAIMVVGSLLFIPAAQSANFTLFLGALFVLGTGLTILQTASNPYVVHIGPKESAAMRISIMGLINKGAGVIVP
ILFTALVLSGFENFTADHLAALSEADRLAQISELSSRLVMPYIYMAVALTFLIGLVKFSSLPELEFEAAEDHQEKGSITH
FPQVILGAVALFAYVGVEVIAGDTIGLYGESLGVHNFASLTSYTMVFMVFGYIIGVTCIPKFISQEKALLGSAIAGILCI
VGAALGSRESTLMADILWGWSGIPVIPNTVTFVALMGLAHALVWPSIWPLALEGLGKYTAQGSALLIMGISGGAILPLIF
GKVAYFADNTQVAYWVGLPCYLFILFYALKGHKMRSW
>Mature_436_residues
TATTQAQASPKSSLLPMTIIGVLFFIFGFVTWLNGSLIPFLKIICELNEFQALFVTFAFYIAYTVMALPMSSILKKTGYK
NGMAIGLAIMVVGSLLFIPAAQSANFTLFLGALFVLGTGLTILQTASNPYVVHIGPKESAAMRISIMGLINKGAGVIVPI
LFTALVLSGFENFTADHLAALSEADRLAQISELSSRLVMPYIYMAVALTFLIGLVKFSSLPELEFEAAEDHQEKGSITHF
PQVILGAVALFAYVGVEVIAGDTIGLYGESLGVHNFASLTSYTMVFMVFGYIIGVTCIPKFISQEKALLGSAIAGILCIV
GAALGSRESTLMADILWGWSGIPVIPNTVTFVALMGLAHALVWPSIWPLALEGLGKYTAQGSALLIMGISGGAILPLIFG
KVAYFADNTQVAYWVGLPCYLFILFYALKGHKMRSW

Specific function: Intake of glucose and galactose (Potential) [H]

COG id: COG0738

COG function: function code G; Fucose permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. FHS transporter (TC 2.A.1.7) family [H]

Homologues:

Organism=Escherichia coli, GI1789166, Length=449, Percent_Identity=27.1714922048998, Blast_Score=139, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005964
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46839; Mature: 46708

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATTQAQASPKSSLLPMTIIGVLFFIFGFVTWLNGSLIPFLKIICELNEFQALFVTFAF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
YIAYTVMALPMSSILKKTGYKNGMAIGLAIMVVGSLLFIPAAQSANFTLFLGALFVLGTG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
LTILQTASNPYVVHIGPKESAAMRISIMGLINKGAGVIVPILFTALVLSGFENFTADHLA
CCEEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCHHHCCHHHHH
ALSEADRLAQISELSSRLVMPYIYMAVALTFLIGLVKFSSLPELEFEAAEDHQEKGSITH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCH
FPQVILGAVALFAYVGVEVIAGDTIGLYGESLGVHNFASLTSYTMVFMVFGYIIGVTCIP
HHHHHHHHHHHHHHHHHHHEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KFISQEKALLGSAIAGILCIVGAALGSRESTLMADILWGWSGIPVIPNTVTFVALMGLAH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
ALVWPSIWPLALEGLGKYTAQGSALLIMGISGGAILPLIFGKVAYFADNTQVAYWVGLPC
HHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEECCCEEEEEECHHH
YLFILFYALKGHKMRSW
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TATTQAQASPKSSLLPMTIIGVLFFIFGFVTWLNGSLIPFLKIICELNEFQALFVTFAF
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
YIAYTVMALPMSSILKKTGYKNGMAIGLAIMVVGSLLFIPAAQSANFTLFLGALFVLGTG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC
LTILQTASNPYVVHIGPKESAAMRISIMGLINKGAGVIVPILFTALVLSGFENFTADHLA
CCEEEECCCCEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCHHHCCHHHHH
ALSEADRLAQISELSSRLVMPYIYMAVALTFLIGLVKFSSLPELEFEAAEDHQEKGSITH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCH
FPQVILGAVALFAYVGVEVIAGDTIGLYGESLGVHNFASLTSYTMVFMVFGYIIGVTCIP
HHHHHHHHHHHHHHHHHHHEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KFISQEKALLGSAIAGILCIVGAALGSRESTLMADILWGWSGIPVIPNTVTFVALMGLAH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
ALVWPSIWPLALEGLGKYTAQGSALLIMGISGGAILPLIFGKVAYFADNTQVAYWVGLPC
HHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHEECCCEEEEEECHHH
YLFILFYALKGHKMRSW
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; L-fucose [Periplasm] [C]

Specific reaction: Proton [Periplasm] + L-fucose [Periplasm] = Proton [Cytoplasm] + L-fucose [Cytoplasm] [C]

General reaction: Permease [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9168605 [H]