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The map label for this gene is 167623076

Identifier: 167623076

GI number: 167623076

Start: 1386018

End: 1386533

Strand: Reverse

Name: 167623076

Synonym: Shal_1142

Alternate gene names: NA

Gene position: 1386533-1386018 (Counterclockwise)

Preceding gene: 167623078

Following gene: 167623075

Centisome position: 26.53

GC content: 45.16

Gene sequence:

>516_bases
ATGCACCACAGAACTGCCGGTTTTACCTTAATCGAGCTGATGGTTACTCTTGTCGTAGCGACGATTCTAATCGTGATCGC
CGTTCCCTCGTTAAGCCAGTTTTACGAGGCACAAAGAGCCAAGTCAGCTATTCGTGTTATACAACAGACTCTACAATATG
CCAGAAATTCCGCAATTAGCTTCGGGGTTAGGGTTACGGTATGCCCTATTGCAAGTGATAGTTGCAGCAAAGACTGGCGC
TTAGGTCTTACTGTTTTTACCGATTCAGGTGACAAGAATCAAATAGATGATACCGATAAGATTCTCCTTCAAACATCTCC
TTTCAATCCGCAAGATATCGTAAGCTACAATAGAACCTCCGTCCGATTTCACTCTGATGGCTTAGCATCCGGTTCTAACG
GTACACTAAGGTACTGCCCCTCCTCCGCCACCAGCCCTTACTCCAAAGCAGTAATTGTAAATCAAGCCGGAAGGGTCCGA
TTCTCCCAAGCAACAAACATAGAATGTTCAAACTAA

Upstream 100 bases:

>100_bases
TTAGTGCTTAAATTAGTCATTCGTAAGCTACACTTTAGCTTTAATCCCCTCCAATATTTACAGGATGTAAATATTAAAAC
TGACTCAAGGAAGAGTTAAA

Downstream 100 bases:

>100_bases
ATAATATTCCACATGTCAAAACCGCTAAACATGACAAGATATTGACTTTAAAAAAGAATGACTTATATGCTGAAATACTA
AACTTTCTCGCTTATAATGC

Product: general secretion pathway protein H

Products: NA

Alternate protein names: Methylation Site Containing Protein; Prepilin-Type Cleavage/Methylation-Like Protein; Type IV Pilus Assembly Protein Fimt; Tfp Pilus Assembly Protein FimT; General Secretion Pathway Protein H

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MHHRTAGFTLIELMVTLVVATILIVIAVPSLSQFYEAQRAKSAIRVIQQTLQYARNSAISFGVRVTVCPIASDSCSKDWR
LGLTVFTDSGDKNQIDDTDKILLQTSPFNPQDIVSYNRTSVRFHSDGLASGSNGTLRYCPSSATSPYSKAVIVNQAGRVR
FSQATNIECSN

Sequences:

>Translated_171_residues
MHHRTAGFTLIELMVTLVVATILIVIAVPSLSQFYEAQRAKSAIRVIQQTLQYARNSAISFGVRVTVCPIASDSCSKDWR
LGLTVFTDSGDKNQIDDTDKILLQTSPFNPQDIVSYNRTSVRFHSDGLASGSNGTLRYCPSSATSPYSKAVIVNQAGRVR
FSQATNIECSN
>Mature_171_residues
MHHRTAGFTLIELMVTLVVATILIVIAVPSLSQFYEAQRAKSAIRVIQQTLQYARNSAISFGVRVTVCPIASDSCSKDWR
LGLTVFTDSGDKNQIDDTDKILLQTSPFNPQDIVSYNRTSVRFHSDGLASGSNGTLRYCPSSATSPYSKAVIVNQAGRVR
FSQATNIECSN

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18707; Mature: 18707

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00409 PROKAR_NTER_METHYL ; PS50999 COX2_TM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHRTAGFTLIELMVTLVVATILIVIAVPSLSQFYEAQRAKSAIRVIQQTLQYARNSAIS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
FGVRVTVCPIASDSCSKDWRLGLTVFTDSGDKNQIDDTDKILLQTSPFNPQDIVSYNRTS
ECEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCE
VRFHSDGLASGSNGTLRYCPSSATSPYSKAVIVNQAGRVRFSQATNIECSN
EEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEEECCCCCCEECC
>Mature Secondary Structure
MHHRTAGFTLIELMVTLVVATILIVIAVPSLSQFYEAQRAKSAIRVIQQTLQYARNSAIS
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
FGVRVTVCPIASDSCSKDWRLGLTVFTDSGDKNQIDDTDKILLQTSPFNPQDIVSYNRTS
ECEEEEEEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCCHHHHHHCCCCE
VRFHSDGLASGSNGTLRYCPSSATSPYSKAVIVNQAGRVRFSQATNIECSN
EEECCCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCEEECCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA