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The map label for this gene is yaaA [C]

Identifier: 167623060

GI number: 167623060

Start: 1368711

End: 1369484

Strand: Direct

Name: yaaA [C]

Synonym: Shal_1126

Alternate gene names: 167623060

Gene position: 1368711-1369484 (Clockwise)

Preceding gene: 167623059

Following gene: 167623061

Centisome position: 26.19

GC content: 43.15

Gene sequence:

>774_bases
ATGCTGATCTTAGTCTCTCCTGCAAAAACGTTAGATTTTGACAATCCTCCAGGCTGCGAAAGCTACTCAATGCCGACGTT
ACTCGATCAAAGTAAACAGCTTATTGAGGTGTGTCGCACGCTTACCCCAACAGATATTGCGACTTTAATGAAAGTAAGCG
ATAAAATTGCAGGGCTAAACGTGGCAAGATTTAGCTCTTGGCAAAAAGATTTTACCCCTGAGAACGCTAAGCAAGCAGTG
TTTGCGTTTCGTGGCGATGTATATACAGGTCTTGATGCCGATACACTGTCAGAGGCAAGCTTACAAAAAGCTCAGAAGCA
ACTAAGGATCTTATCGGGTTTATATGGTTTGCTTAAGCCATTAGATTTGATGCAGGCGTATCGATTAGAGATGGGGACCC
GACTCGCTAATGATCGTGGCACGAATCTGTATCAATTCTGGGGGGATATCATCACCGATGAAATCAATAAGACCACAGAG
GAGCAGGGCGATGAATTCATCATTAACTTAGCGTCGAATGAGTATTTTAAAGCCGTGAAACCTAAGCAACTCAATGCGCA
GGTGATCACCCCAATCTTTAAAGACTGTAAGAATGGCCAATATAAAGTTATCAGTTTCTTTGCCAAAAAGGCGAGAGGCA
TGATGGTGCGTTATATTTTGGATAACCATGTCGACTCGCTAGAGGCATTAATCAAGTTTGATACGGCGGGTTACTACTAC
AGTGAAAAAGACTCGACAGTTAATGAGCCAGTATTCCTGCGTGAAGCGCAATAG

Upstream 100 bases:

>100_bases
TTTTATCAGTACAATCTAAAAAACCACGCTGTTTAAGCGTGGTTTTTTTGTTTTTGTTCAGTATCATTAGCTTAATTATT
TATCTTTAAAGGCCTCATGT

Downstream 100 bases:

>100_bases
TCGTTAGGCGCATGGGGATAATCGAAGTAATCGGTACCATCTGGCCTGTGGATGCCACTGATATACCTTTAGGTGGCTAT
ATGGATACATCAAGACCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLILVSPAKTLDFDNPPGCESYSMPTLLDQSKQLIEVCRTLTPTDIATLMKVSDKIAGLNVARFSSWQKDFTPENAKQAV
FAFRGDVYTGLDADTLSEASLQKAQKQLRILSGLYGLLKPLDLMQAYRLEMGTRLANDRGTNLYQFWGDIITDEINKTTE
EQGDEFIINLASNEYFKAVKPKQLNAQVITPIFKDCKNGQYKVISFFAKKARGMMVRYILDNHVDSLEALIKFDTAGYYY
SEKDSTVNEPVFLREAQ

Sequences:

>Translated_257_residues
MLILVSPAKTLDFDNPPGCESYSMPTLLDQSKQLIEVCRTLTPTDIATLMKVSDKIAGLNVARFSSWQKDFTPENAKQAV
FAFRGDVYTGLDADTLSEASLQKAQKQLRILSGLYGLLKPLDLMQAYRLEMGTRLANDRGTNLYQFWGDIITDEINKTTE
EQGDEFIINLASNEYFKAVKPKQLNAQVITPIFKDCKNGQYKVISFFAKKARGMMVRYILDNHVDSLEALIKFDTAGYYY
SEKDSTVNEPVFLREAQ
>Mature_257_residues
MLILVSPAKTLDFDNPPGCESYSMPTLLDQSKQLIEVCRTLTPTDIATLMKVSDKIAGLNVARFSSWQKDFTPENAKQAV
FAFRGDVYTGLDADTLSEASLQKAQKQLRILSGLYGLLKPLDLMQAYRLEMGTRLANDRGTNLYQFWGDIITDEINKTTE
EQGDEFIINLASNEYFKAVKPKQLNAQVITPIFKDCKNGQYKVISFFAKKARGMMVRYILDNHVDSLEALIKFDTAGYYY
SEKDSTVNEPVFLREAQ

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family [H]

Homologues:

Organism=Escherichia coli, GI1786187, Length=257, Percent_Identity=59.1439688715953, Blast_Score=330, Evalue=4e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005583 [H]

Pfam domain/function: PF03883 DUF328 [H]

EC number: NA

Molecular weight: Translated: 29061; Mature: 29061

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLILVSPAKTLDFDNPPGCESYSMPTLLDQSKQLIEVCRTLTPTDIATLMKVSDKIAGLN
CEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
VARFSSWQKDFTPENAKQAVFAFRGDVYTGLDADTLSEASLQKAQKQLRILSGLYGLLKP
HHHHHHHHHCCCCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLMQAYRLEMGTRLANDRGTNLYQFWGDIITDEINKTTEEQGDEFIINLASNEYFKAVK
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCC
PKQLNAQVITPIFKDCKNGQYKVISFFAKKARGMMVRYILDNHVDSLEALIKFDTAGYYY
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHCCCCCEE
SEKDSTVNEPVFLREAQ
CCCCCCCCCCEEEEECC
>Mature Secondary Structure
MLILVSPAKTLDFDNPPGCESYSMPTLLDQSKQLIEVCRTLTPTDIATLMKVSDKIAGLN
CEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC
VARFSSWQKDFTPENAKQAVFAFRGDVYTGLDADTLSEASLQKAQKQLRILSGLYGLLKP
HHHHHHHHHCCCCCHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLMQAYRLEMGTRLANDRGTNLYQFWGDIITDEINKTTEEQGDEFIINLASNEYFKAVK
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHCCC
PKQLNAQVITPIFKDCKNGQYKVISFFAKKARGMMVRYILDNHVDSLEALIKFDTAGYYY
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHCCHHHHHHHHHHCCCCCEE
SEKDSTVNEPVFLREAQ
CCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA