Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167623046

Identifier: 167623046

GI number: 167623046

Start: 1350804

End: 1351205

Strand: Reverse

Name: 167623046

Synonym: Shal_1112

Alternate gene names: NA

Gene position: 1351205-1350804 (Counterclockwise)

Preceding gene: 167623047

Following gene: 167623044

Centisome position: 25.85

GC content: 45.27

Gene sequence:

>402_bases
ATGTTATCAAGACCCGTTTATGAAGCCCTGCCCTACACTTATATAGCTCTAGGTAGCATTAGCTTGATGCTGCTGGAGCA
AACTTATGCCCAACTCTTCGCTGCACTACTATTTCTATTAGGGAGTCGTGTCGATGTGCTGCGCTCTTGTTATCGCCGTA
CTGACTCTAAGAAACGTAGAAGAAAGGGCAAACTGCCCACCTTTATCTACGAGCACACCCCATACCTGTACCTACTAACC
GCGTTATTACTACTCAAACTCGACTCAAAACTGGCGCCTGTGTTTAGTATTGCGCTAGTAAGTTATGCGCTCTATATCTT
TGCGAGGCGCACAATGAACCGCAAACATAAAACCGTCACTTTGCAACGACTAGAAGATATCGGTAACACCCATAATCGAT
AG

Upstream 100 bases:

>100_bases
CACTTCACTGATTTAAATGAAGCGGGCTTTTTTATGGTCTACACTATTTAAATTGAACAATGGAATTGCTCAGAAAAACC
TTTTTGCAAAGGAACTGCAA

Downstream 100 bases:

>100_bases
CAGATAGCGACTACAGGCAGTAACAATCCTAGTTGAGCCAAGCTGTTGGACGTCTATAAAATTAACCGCTGAATATTGTC
TCTTTGCTGCAAACTCATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MLSRPVYEALPYTYIALGSISLMLLEQTYAQLFAALLFLLGSRVDVLRSCYRRTDSKKRRRKGKLPTFIYEHTPYLYLLT
ALLLLKLDSKLAPVFSIALVSYALYIFARRTMNRKHKTVTLQRLEDIGNTHNR

Sequences:

>Translated_133_residues
MLSRPVYEALPYTYIALGSISLMLLEQTYAQLFAALLFLLGSRVDVLRSCYRRTDSKKRRRKGKLPTFIYEHTPYLYLLT
ALLLLKLDSKLAPVFSIALVSYALYIFARRTMNRKHKTVTLQRLEDIGNTHNR
>Mature_133_residues
MLSRPVYEALPYTYIALGSISLMLLEQTYAQLFAALLFLLGSRVDVLRSCYRRTDSKKRRRKGKLPTFIYEHTPYLYLLT
ALLLLKLDSKLAPVFSIALVSYALYIFARRTMNRKHKTVTLQRLEDIGNTHNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15489; Mature: 15489

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRPVYEALPYTYIALGSISLMLLEQTYAQLFAALLFLLGSRVDVLRSCYRRTDSKKRR
CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHH
RKGKLPTFIYEHTPYLYLLTALLLLKLDSKLAPVFSIALVSYALYIFARRTMNRKHKTVT
HCCCCCEEHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
LQRLEDIGNTHNR
HHHHHHHCCCCCC
>Mature Secondary Structure
MLSRPVYEALPYTYIALGSISLMLLEQTYAQLFAALLFLLGSRVDVLRSCYRRTDSKKRR
CCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHH
RKGKLPTFIYEHTPYLYLLTALLLLKLDSKLAPVFSIALVSYALYIFARRTMNRKHKTVT
HCCCCCEEHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
LQRLEDIGNTHNR
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA