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The map label for this gene is rseC [H]

Identifier: 167623014

GI number: 167623014

Start: 1318480

End: 1318944

Strand: Direct

Name: rseC [H]

Synonym: Shal_1080

Alternate gene names: 167623014

Gene position: 1318480-1318944 (Clockwise)

Preceding gene: 167623013

Following gene: 167623015

Centisome position: 25.22

GC content: 46.45

Gene sequence:

>465_bases
ATGATGGAAGAAGTCGCTAGAGTTGTCGCCAATGGCAACTCTGGTTGGGTCGTTGTAGAAGTTGAAATGAAGAGTGCCTG
TAATCACTGCGAGAGTGGTGATTCCTGTGGGACTTCAGCTGTTTCAAAAGCGTTTTCGCCCAAAGTACAACGTTTTTCAA
TTCAAAGTGAGCAGCAGTTTGTTAAAGGTGAACGCTTAAAATTGGGGTTACCGGAAAGTGTGATCCTAAAAGCGGCAACC
TTAGTCTATATTTTACCGCTTATCGGTTTGTTTATCGGCGCTTTCGGCGCAAATCAAATCGGCTTCTTATTTGGAGGCGC
TTCCGACCTGTTATCTATTTCGGGAGCATTAGTGGGAAGCTTCTGTTTCTGGGCCGCCGGGAAAAAAGCGTCCAAGAGAT
TAGAAGCGCAGGCACAGCCTGTCATCATCAAGTCTCTGGGCAAGCCCATCGAGATAGCTAATTAG

Upstream 100 bases:

>100_bases
CGAGTCGGTAATGCCGAGGTCGTTGCTGTTGGTAAAGTACCTGCTGAAACCTTAAGCCGTATTGCTAAAAGCATCATGTT
GCAGTGATGAAGGTTCTATC

Downstream 100 bases:

>100_bases
GCATTACACTGGCCATTAGTTATTTTTTCCTCAGTTATCACACTATAAAAATTGGTATTAAAGCTGCGATCGGGTACAAT
TCTGCACTTTAAAATTTTTA

Product: sigma E positive regulator RseC/MucC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MMEEVARVVANGNSGWVVVEVEMKSACNHCESGDSCGTSAVSKAFSPKVQRFSIQSEQQFVKGERLKLGLPESVILKAAT
LVYILPLIGLFIGAFGANQIGFLFGGASDLLSISGALVGSFCFWAAGKKASKRLEAQAQPVIIKSLGKPIEIAN

Sequences:

>Translated_154_residues
MMEEVARVVANGNSGWVVVEVEMKSACNHCESGDSCGTSAVSKAFSPKVQRFSIQSEQQFVKGERLKLGLPESVILKAAT
LVYILPLIGLFIGAFGANQIGFLFGGASDLLSISGALVGSFCFWAAGKKASKRLEAQAQPVIIKSLGKPIEIAN
>Mature_154_residues
MMEEVARVVANGNSGWVVVEVEMKSACNHCESGDSCGTSAVSKAFSPKVQRFSIQSEQQFVKGERLKLGLPESVILKAAT
LVYILPLIGLFIGAFGANQIGFLFGGASDLLSISGALVGSFCFWAAGKKASKRLEAQAQPVIIKSLGKPIEIAN

Specific function: Seems to modulate the activity of rpoE (sigma-E) [H]

COG id: COG3086

COG function: function code T; Positive regulator of sigma E activity

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rseC family [H]

Homologues:

Organism=Escherichia coli, GI1788923, Length=145, Percent_Identity=31.0344827586207, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007359 [H]

Pfam domain/function: PF04246 RseC_MucC [H]

EC number: NA

Molecular weight: Translated: 16264; Mature: 16264

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMEEVARVVANGNSGWVVVEVEMKSACNHCESGDSCGTSAVSKAFSPKVQRFSIQSEQQF
CHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHCCCHHHHH
VKGERLKLGLPESVILKAATLVYILPLIGLFIGAFGANQIGFLFGGASDLLSISGALVGS
HCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHHH
FCFWAAGKKASKRLEAQAQPVIIKSLGKPIEIAN
HHHHHCCHHHHHHHHHCCCCHHHHHCCCCCCCCC
>Mature Secondary Structure
MMEEVARVVANGNSGWVVVEVEMKSACNHCESGDSCGTSAVSKAFSPKVQRFSIQSEQQF
CHHHHHHHHHCCCCCEEEEEEEHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHCCCHHHHH
VKGERLKLGLPESVILKAATLVYILPLIGLFIGAFGANQIGFLFGGASDLLSISGALVGS
HCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCHHHHHHHHHHHHHH
FCFWAAGKKASKRLEAQAQPVIIKSLGKPIEIAN
HHHHHCCHHHHHHHHHCCCCHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7889935; 9278503 [H]