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The map label for this gene is 167622988

Identifier: 167622988

GI number: 167622988

Start: 1286827

End: 1287309

Strand: Reverse

Name: 167622988

Synonym: Shal_1054

Alternate gene names: NA

Gene position: 1287309-1286827 (Counterclockwise)

Preceding gene: 167622989

Following gene: 167622985

Centisome position: 24.63

GC content: 46.58

Gene sequence:

>483_bases
ATGGAAAAATATGAACAGCTATTGATTTCGCTGCGCCGAGTGATCCGAGCGATTGATATTCACTCACGCCAACTGAACAA
GCAATCAGGCTTAACTGGACCGCAGTTGATGGTGATGCAAAGTATTGAACAGCTTGAAACGCCGCTAGCGAAAGAAGTCG
CTAAAGAGGTCGCACTTAGCCCTGCAACAGTGACGACAATTATTGATAGGCTAGAAAGTCGTGAACTCGTCGTTAGAACC
CGCAGCGAAACTGATAAACGCAAAGTAATCCTATCACTGAGTGAAGCAGGTAAAGCATTACTGAGCAGCTCGCCTAAGCC
ATTACAAGAACACTTTATTACACGCTATCAAAACCTTGAACAGTGGGAGCAGAGCCAACTGTTATCATCAGTTGAGCGCA
TTGCCGCCATGATGGATGCCAATGAGCTAGATGCAGCACCCGTACTGTTGGTGGGGCAAATTCAAGCTGATGAAGCGCTT
TAG

Upstream 100 bases:

>100_bases
GATCGTTATACCGCACTTTTTTAATCGCTGCGATGAACAGCAAAGCTATTAATTCAAAACTTAACGGCACAGGTACAGGC
CTTTTGACCAAGGAATACAG

Downstream 100 bases:

>100_bases
CCTTACGGCACTTCGCTTAAGTTATAAACTTAATTTTGTAGGCCTTAATTTTTGTAAGTATTAGCTTTGTAAGCTATTAG
TTTTGAAACATTAGTTTTGA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator TrmB; Regulatory Protein MarR; Transcriptional Regulator Of MarR Family Protein; Transcriptional Regulator MarR Family Protein; HTH-Type Transcriptional Regulator; MarR Family Regulatory Protein; MarR-Family Transcriptional Regulator; Transcriptional Regulator BlaI/MecI/CopY Family; MarR Family Regulatory Helix-Turn-Helix

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MEKYEQLLISLRRVIRAIDIHSRQLNKQSGLTGPQLMVMQSIEQLETPLAKEVAKEVALSPATVTTIIDRLESRELVVRT
RSETDKRKVILSLSEAGKALLSSSPKPLQEHFITRYQNLEQWEQSQLLSSVERIAAMMDANELDAAPVLLVGQIQADEAL

Sequences:

>Translated_160_residues
MEKYEQLLISLRRVIRAIDIHSRQLNKQSGLTGPQLMVMQSIEQLETPLAKEVAKEVALSPATVTTIIDRLESRELVVRT
RSETDKRKVILSLSEAGKALLSSSPKPLQEHFITRYQNLEQWEQSQLLSSVERIAAMMDANELDAAPVLLVGQIQADEAL
>Mature_160_residues
MEKYEQLLISLRRVIRAIDIHSRQLNKQSGLTGPQLMVMQSIEQLETPLAKEVAKEVALSPATVTTIIDRLESRELVVRT
RSETDKRKVILSLSEAGKALLSSSPKPLQEHFITRYQNLEQWEQSQLLSSVERIAAMMDANELDAAPVLLVGQIQADEAL

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17975; Mature: 17975

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKYEQLLISLRRVIRAIDIHSRQLNKQSGLTGPQLMVMQSIEQLETPLAKEVAKEVALS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCC
PATVTTIIDRLESRELVVRTRSETDKRKVILSLSEAGKALLSSSPKPLQEHFITRYQNLE
CHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QWEQSQLLSSVERIAAMMDANELDAAPVLLVGQIQADEAL
HHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MEKYEQLLISLRRVIRAIDIHSRQLNKQSGLTGPQLMVMQSIEQLETPLAKEVAKEVALS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCC
PATVTTIIDRLESRELVVRTRSETDKRKVILSLSEAGKALLSSSPKPLQEHFITRYQNLE
CHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QWEQSQLLSSVERIAAMMDANELDAAPVLLVGQIQADEAL
HHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA