| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is mtnN
Identifier: 167622985
GI number: 167622985
Start: 1283577
End: 1284269
Strand: Reverse
Name: mtnN
Synonym: Shal_1051
Alternate gene names: 167622985
Gene position: 1284269-1283577 (Counterclockwise)
Preceding gene: 167622988
Following gene: 167622984
Centisome position: 24.57
GC content: 48.92
Gene sequence:
>693_bases ATGAAAATCGGTATTATTGGCGCTATGGAGCCGGAAGTTGCACATTTAGTTGAGTCGATGGAAAACCCAAGCTCTACAAC CATCGCCGGTATCGAGTTTGTTGCAGGTCAGCTAGCGGGCAAAGACGTTATCGTTACTCGTTCAGGCATTGGTAAAGTAA CAGCCAGCATTGCGACGACGCTGCTTATCGAAAAGTATGCACCTGATGTGATTATTAACACAGGTTCTGCTGGCGGCTTC GCCGACGAACTTGCCATTGGCGATATCGTGATCTCATCTGAAGTGCGTCACCATGATGTTGACGTGACTGCGTTCGGTTA TGAGATTGGCCAGATGGCGCAGCAACCTGCAGCGTTTATCCCTGATGCTAAGCTTGTGGCTGCGGCGCAAAAAGCGGTTG CTAGCCTTGGTGAAGTCAAAGCCATTGAAGGTTTAATCTGTACAGGCGATAGCTTTATTTGCGATCCCGTTCGCACCAAG ACCATGCTAGAGAACTTCCCAACGATGGCGGCGTGTGAAATGGAAGGCGCAGCGATTGCTCAGGTTTGTCACCAGTTTGG TGTACCGTTTGTGGTTATCCGCTCTCTGTCCGACAATGCTAACAACGACTCGCCTGTAGATTTTGACGAATACATTGTTA AAGCAGGCCACCACTCTGCATTGATGGTTATCGCTCTGCTTAAGCAACTTTAA
Upstream 100 bases:
>100_bases AGCCTTACTTCTCATCTTATCTTCAAGGCTTTTTCACTAACGCCAAGTGCCGTGGTATATTAGCGCCCATATTCATTCAG GTAGTTAAAAAGGTCATTAA
Downstream 100 bases:
>100_bases GCTAAGCTGCTTTAAGTTAAAAAAGCTCTAAGCTAAAAAGCTTTTAATTAAAGACGAGTAAAGCAACACAAGGATAGCGC AGCAATATGGTTCCAGAGTT
Product: adenosylhomocysteine nucleosidase
Products: NA
Alternate protein names: MTA/SAH nucleosidase; MTAN; 5'-methylthioadenosine nucleosidase; MTA nucleosidase; S-adenosylhomocysteine nucleosidase; AdoHcy nucleosidase; SAH nucleosidase; SRH nucleosidase
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKIGIIGAMEPEVAHLVESMENPSSTTIAGIEFVAGQLAGKDVIVTRSGIGKVTASIATTLLIEKYAPDVIINTGSAGGF ADELAIGDIVISSEVRHHDVDVTAFGYEIGQMAQQPAAFIPDAKLVAAAQKAVASLGEVKAIEGLICTGDSFICDPVRTK TMLENFPTMAACEMEGAAIAQVCHQFGVPFVVIRSLSDNANNDSPVDFDEYIVKAGHHSALMVIALLKQL
Sequences:
>Translated_230_residues MKIGIIGAMEPEVAHLVESMENPSSTTIAGIEFVAGQLAGKDVIVTRSGIGKVTASIATTLLIEKYAPDVIINTGSAGGF ADELAIGDIVISSEVRHHDVDVTAFGYEIGQMAQQPAAFIPDAKLVAAAQKAVASLGEVKAIEGLICTGDSFICDPVRTK TMLENFPTMAACEMEGAAIAQVCHQFGVPFVVIRSLSDNANNDSPVDFDEYIVKAGHHSALMVIALLKQL >Mature_230_residues MKIGIIGAMEPEVAHLVESMENPSSTTIAGIEFVAGQLAGKDVIVTRSGIGKVTASIATTLLIEKYAPDVIINTGSAGGF ADELAIGDIVISSEVRHHDVDVTAFGYEIGQMAQQPAAFIPDAKLVAAAQKAVASLGEVKAIEGLICTGDSFICDPVRTK TMLENFPTMAACEMEGAAIAQVCHQFGVPFVVIRSLSDNANNDSPVDFDEYIVKAGHHSALMVIALLKQL
Specific function: Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
COG id: COG0775
COG function: function code F; Nucleoside phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/UDP phosphorylase family. MtnN subfamily
Homologues:
Organism=Escherichia coli, GI1786354, Length=230, Percent_Identity=52.1739130434783, Blast_Score=207, Evalue=5e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTNN_SHEHH (B0TIS5)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001673279.1 - ProteinModelPortal: B0TIS5 - SMR: B0TIS5 - GeneID: 5905752 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_1051 - HOGENOM: HBG367723 - OMA: LEHFPTM - ProtClustDB: CLSK906203 - BioCyc: SHAL458817:SHAL_1051-MONOMER - HAMAP: MF_01684 - InterPro: IPR010049 - InterPro: IPR018017 - InterPro: IPR000845 - PANTHER: PTHR21234 - TIGRFAMs: TIGR01704
Pfam domain/function: PF01048 PNP_UDP_1
EC number: =3.2.2.9
Molecular weight: Translated: 24128; Mature: 24128
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: ACT_SITE 12-12 BINDING 78-78 BINDING 153-153 BINDING 198-198
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIGIIGAMEPEVAHLVESMENPSSTTIAGIEFVAGQLAGKDVIVTRSGIGKVTASIATT CEEEEECCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH LLIEKYAPDVIINTGSAGGFADELAIGDIVISSEVRHHDVDVTAFGYEIGQMAQQPAAFI HHHHHCCCCEEEECCCCCCCHHHHHHHHEEEECCCHHCCCCEEEECHHHHHHHCCCHHCC PDAKLVAAAQKAVASLGEVKAIEGLICTGDSFICDPVRTKTMLENFPTMAACEMEGAAIA CCHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEECCHHHHHHHHHCCCCEECCCCCHHHH QVCHQFGVPFVVIRSLSDNANNDSPVDFDEYIVKAGHHSALMVIALLKQL HHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHC >Mature Secondary Structure MKIGIIGAMEPEVAHLVESMENPSSTTIAGIEFVAGQLAGKDVIVTRSGIGKVTASIATT CEEEEECCCCHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH LLIEKYAPDVIINTGSAGGFADELAIGDIVISSEVRHHDVDVTAFGYEIGQMAQQPAAFI HHHHHCCCCEEEECCCCCCCHHHHHHHHEEEECCCHHCCCCEEEECHHHHHHHCCCHHCC PDAKLVAAAQKAVASLGEVKAIEGLICTGDSFICDPVRTKTMLENFPTMAACEMEGAAIA CCHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEECCHHHHHHHHHCCCCEECCCCCHHHH QVCHQFGVPFVVIRSLSDNANNDSPVDFDEYIVKAGHHSALMVIALLKQL HHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA