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The map label for this gene is ynhG [H]

Identifier: 167622954

GI number: 167622954

Start: 1244956

End: 1245855

Strand: Direct

Name: ynhG [H]

Synonym: Shal_1015

Alternate gene names: 167622954

Gene position: 1244956-1245855 (Clockwise)

Preceding gene: 167622953

Following gene: 167622957

Centisome position: 23.82

GC content: 47.11

Gene sequence:

>900_bases
ATGATGCGTAATTTGCTGTTGTTCATCTTGGCATTTTTGCCACTGGCTTCATTTGCCAATGTTTATTCAATTCCTCAAGA
TGGCAGTCGCCTAGTTGGGGAGTTGCAAGAGCACGTCGTTCAAAAGGGGGATTTCTTCCAGACGATTTCGAAGCAATACA
ATATCGGTATTTTGGAATTGATGGAGTCAAACCCTGGTGTTGACCCATTTTTACCAACGCCAGGCACCCGTTTATTGATC
CCAACTCAGATGTTGCTGCCAGACGTACCGCATAAAGGCATAGTGATTAACTTAGCCGAGCTGCGTTTGTATTACTTCCC
TAAAGGCGGTAAAGAAGTGCATGTGTTCCCCGTGGGGATTGGCCGCGTTGGTCGTGAAACCCCTGAAATGGTAACCAAGA
TTAAGTCGCGGATTCCTAATCCCAGTTGGACACCGCCAGCAAGCATTCGTAAAGATCACTTAGAGGAGCGCGGCGAAGAA
TTACCGCGTGTGGTTCCCGCTGGACCGGATAACCCATTAGGTAAGTTTGCGATTCAGCTCTCTTATGGTGACGGTAGCTA
TCTCATCCACGGAACTAACAAGGACTTTGGTATAGGTATGCGTGTGAGTGCGGGCTGTATTCGTCTAAACCCAGATGACA
TCGAATGGTTATTCGATAAGGTGAAGTACGGCGAGCGGGTCACTATTATTAATGAAACGGTTAAAACGTCGACTGAGCCT
GATGGACGTCAGTTGATTGAGGTGCACTCTCCGTTATCAACCACAGGTGGTAAGGCCGATACTGTGAGTGAGATGAAACG
TGGTGTGGTTGAGTTTATTGGTAAAGATGATGTCGATTACACCAAAGCCAATGATGCCTTACTCACACGGTCAGGGATCC
CGGTGAATATCCAAAGCTAA

Upstream 100 bases:

>100_bases
ATGCACTAGAAATCGACTTTGTTATTAATGTGATGACTAGAAAATAATCTGCGCTCAGGGTAATCTTTGCTTATTCAACT
AAACGGAAACCGAAAAACTG

Downstream 100 bases:

>100_bases
TCGCTTTGTTTATCATTTTGAAGGCGTCCACATTGGGCGCTTTTTTATTGCTTTAATTATTGTCACGAGATAAATGATAT
CCGTGGCTACAGGGGATAGT

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MMRNLLLFILAFLPLASFANVYSIPQDGSRLVGELQEHVVQKGDFFQTISKQYNIGILELMESNPGVDPFLPTPGTRLLI
PTQMLLPDVPHKGIVINLAELRLYYFPKGGKEVHVFPVGIGRVGRETPEMVTKIKSRIPNPSWTPPASIRKDHLEERGEE
LPRVVPAGPDNPLGKFAIQLSYGDGSYLIHGTNKDFGIGMRVSAGCIRLNPDDIEWLFDKVKYGERVTIINETVKTSTEP
DGRQLIEVHSPLSTTGGKADTVSEMKRGVVEFIGKDDVDYTKANDALLTRSGIPVNIQS

Sequences:

>Translated_299_residues
MMRNLLLFILAFLPLASFANVYSIPQDGSRLVGELQEHVVQKGDFFQTISKQYNIGILELMESNPGVDPFLPTPGTRLLI
PTQMLLPDVPHKGIVINLAELRLYYFPKGGKEVHVFPVGIGRVGRETPEMVTKIKSRIPNPSWTPPASIRKDHLEERGEE
LPRVVPAGPDNPLGKFAIQLSYGDGSYLIHGTNKDFGIGMRVSAGCIRLNPDDIEWLFDKVKYGERVTIINETVKTSTEP
DGRQLIEVHSPLSTTGGKADTVSEMKRGVVEFIGKDDVDYTKANDALLTRSGIPVNIQS
>Mature_299_residues
MMRNLLLFILAFLPLASFANVYSIPQDGSRLVGELQEHVVQKGDFFQTISKQYNIGILELMESNPGVDPFLPTPGTRLLI
PTQMLLPDVPHKGIVINLAELRLYYFPKGGKEVHVFPVGIGRVGRETPEMVTKIKSRIPNPSWTPPASIRKDHLEERGEE
LPRVVPAGPDNPLGKFAIQLSYGDGSYLIHGTNKDFGIGMRVSAGCIRLNPDDIEWLFDKVKYGERVTIINETVKTSTEP
DGRQLIEVHSPLSTTGGKADTVSEMKRGVVEFIGKDDVDYTKANDALLTRSGIPVNIQS

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=300, Percent_Identity=47, Blast_Score=267, Evalue=5e-73,
Organism=Escherichia coli, GI1787356, Length=287, Percent_Identity=48.780487804878, Blast_Score=266, Evalue=2e-72,
Organism=Escherichia coli, GI1788299, Length=305, Percent_Identity=46.8852459016393, Blast_Score=264, Evalue=6e-72,
Organism=Escherichia coli, GI1787040, Length=297, Percent_Identity=46.8013468013468, Blast_Score=258, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 33090; Mature: 33090

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRNLLLFILAFLPLASFANVYSIPQDGSRLVGELQEHVVQKGDFFQTISKQYNIGILEL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEE
MESNPGVDPFLPTPGTRLLIPTQMLLPDVPHKGIVINLAELRLYYFPKGGKEVHVFPVGI
ECCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEECC
GRVGRETPEMVTKIKSRIPNPSWTPPASIRKDHLEERGEELPRVVPAGPDNPLGKFAIQL
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
SYGDGSYLIHGTNKDFGIGMRVSAGCIRLNPDDIEWLFDKVKYGERVTIINETVKTSTEP
EECCCCEEEEECCCCCCCEEEEECCEEEECCHHHHHHHHHHCCCCEEEEEEHHHHCCCCC
DGRQLIEVHSPLSTTGGKADTVSEMKRGVVEFIGKDDVDYTKANDALLTRSGIPVNIQS
CCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEECC
>Mature Secondary Structure
MMRNLLLFILAFLPLASFANVYSIPQDGSRLVGELQEHVVQKGDFFQTISKQYNIGILEL
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEE
MESNPGVDPFLPTPGTRLLIPTQMLLPDVPHKGIVINLAELRLYYFPKGGKEVHVFPVGI
ECCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCEEEEEEEEEEEEECCCCCEEEEEEECC
GRVGRETPEMVTKIKSRIPNPSWTPPASIRKDHLEERGEELPRVVPAGPDNPLGKFAIQL
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEE
SYGDGSYLIHGTNKDFGIGMRVSAGCIRLNPDDIEWLFDKVKYGERVTIINETVKTSTEP
EECCCCEEEEECCCCCCCEEEEECCEEEECCHHHHHHHHHHCCCCEEEEEEHHHHCCCCC
DGRQLIEVHSPLSTTGGKADTVSEMKRGVVEFIGKDDVDYTKANDALLTRSGIPVNIQS
CCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]