Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is plsY

Identifier: 167622949

GI number: 167622949

Start: 1241434

End: 1242033

Strand: Reverse

Name: plsY

Synonym: Shal_1010

Alternate gene names: 167622949

Gene position: 1242033-1241434 (Counterclockwise)

Preceding gene: 167622955

Following gene: 167622948

Centisome position: 23.76

GC content: 48.0

Gene sequence:

>600_bases
TTGACTCTAACAGTACTCACCATAGTCATAATCGTGGGCGCCTATTTGGCGGGCTCAGTATCGAGTGCAGTTTTAGTATG
TAAAATTCGTGGTCTTCCCGACCCTCGAACCCAAGGCTCGGGCAATCCAGGCGCGACTAATGTACTGCGTATCGGCGGAG
CCAGTTCAGCGGCTCTAGTGCTATTTTGTGACATGCTAAAAGGCGCGGCGCCAGCTTATCTAGCTTTTAGACTCGGAGTC
GATCCGATTGCACTGGGTGTTATTGCCATTGCCGCCTGTCTTGGTCATATATTTCCCATTTTCTTTGGCTTCAAAGGCGG
TAAAGGTGTCGCAACAGCATTCGGCGCTATGGCTCCTATCGGTCATGACTTAGCACTTTGCCTCCTGGCATCTTGGATAG
TTCTTGTTCTAGTCACCCGTTACTCATCGTTCGCCGCAATTTGTACAGCATTGCTTGCTCCGGTTTACACTTGGTGGCTT
GATGACAGGTTTACCATTCCGGTTGCCATGCTTTCAACTTTGATAGTGATTCGCCATAAAGACAACATTAAGCGCCTACT
TAAAGGTGAAGAGTCTAAGGTTTCACGAAAAAAAACATAG

Upstream 100 bases:

>100_bases
ATGCACTCGTTATGTGTTTAATTCATCTACAACTAACAAAACACACAAGCACATTTTTTATGTGGCGCGATGATACCCTA
AGACGGATAAGGAAACCAAT

Downstream 100 bases:

>100_bases
CGACACTCGCACAAAAAACCGTTAAAGATTAATTAACTAGCAATGTTTAATCTCATTAGCTTATAGCGCTTAAATATCCC
CTATTGTTCGTCCCCTTAGC

Product: putative glycerol-3-phosphate acyltransferase PlsY

Products: NA

Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase

Number of amino acids: Translated: 199; Mature: 198

Protein sequence:

>199_residues
MTLTVLTIVIIVGAYLAGSVSSAVLVCKIRGLPDPRTQGSGNPGATNVLRIGGASSAALVLFCDMLKGAAPAYLAFRLGV
DPIALGVIAIAACLGHIFPIFFGFKGGKGVATAFGAMAPIGHDLALCLLASWIVLVLVTRYSSFAAICTALLAPVYTWWL
DDRFTIPVAMLSTLIVIRHKDNIKRLLKGEESKVSRKKT

Sequences:

>Translated_199_residues
MTLTVLTIVIIVGAYLAGSVSSAVLVCKIRGLPDPRTQGSGNPGATNVLRIGGASSAALVLFCDMLKGAAPAYLAFRLGV
DPIALGVIAIAACLGHIFPIFFGFKGGKGVATAFGAMAPIGHDLALCLLASWIVLVLVTRYSSFAAICTALLAPVYTWWL
DDRFTIPVAMLSTLIVIRHKDNIKRLLKGEESKVSRKKT
>Mature_198_residues
TLTVLTIVIIVGAYLAGSVSSAVLVCKIRGLPDPRTQGSGNPGATNVLRIGGASSAALVLFCDMLKGAAPAYLAFRLGVD
PIALGVIAIAACLGHIFPIFFGFKGGKGVATAFGAMAPIGHDLALCLLASWIVLVLVTRYSSFAAICTALLAPVYTWWLD
DRFTIPVAMLSTLIVIRHKDNIKRLLKGEESKVSRKKT

Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP

COG id: COG0344

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the plsY family

Homologues:

Organism=Escherichia coli, GI1789439, Length=188, Percent_Identity=61.7021276595745, Blast_Score=240, Evalue=4e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PLSY_SHEHH (B0TIN9)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001673243.1
- GeneID:   5905168
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_1010
- HOGENOM:   HBG734487
- OMA:   SRIGEKK
- ProtClustDB:   PRK00220
- BioCyc:   SHAL458817:SHAL_1010-MONOMER
- HAMAP:   MF_01043
- InterPro:   IPR003811
- TIGRFAMs:   TIGR00023

Pfam domain/function: PF02660 DUF205

EC number: NA

Molecular weight: Translated: 20942; Mature: 20811

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x91f9ed4)-; HASH(0x20097fd8)-; HASH(0x1fbe0450)-; HASH(0x1fd7c6e8)-; HASH(0x1f4a2b10)-;

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTVLTIVIIVGAYLAGSVSSAVLVCKIRGLPDPRTQGSGNPGATNVLRIGGASSAALV
CHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHH
LFCDMLKGAAPAYLAFRLGVDPIALGVIAIAACLGHIFPIFFGFKGGKGVATAFGAMAPI
HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
GHDLALCLLASWIVLVLVTRYSSFAAICTALLAPVYTWWLDDRFTIPVAMLSTLIVIRHK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCH
DNIKRLLKGEESKVSRKKT
HHHHHHHCCCHHHHHCCCH
>Mature Secondary Structure 
TLTVLTIVIIVGAYLAGSVSSAVLVCKIRGLPDPRTQGSGNPGATNVLRIGGASSAALV
HHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHH
LFCDMLKGAAPAYLAFRLGVDPIALGVIAIAACLGHIFPIFFGFKGGKGVATAFGAMAPI
HHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
GHDLALCLLASWIVLVLVTRYSSFAAICTALLAPVYTWWLDDRFTIPVAMLSTLIVIRHK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCH
DNIKRLLKGEESKVSRKKT
HHHHHHHCCCHHHHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA