| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is yqeY [H]
Identifier: 167622945
GI number: 167622945
Start: 1238530
End: 1238973
Strand: Reverse
Name: yqeY [H]
Synonym: Shal_1006
Alternate gene names: 167622945
Gene position: 1238973-1238530 (Counterclockwise)
Preceding gene: 167622946
Following gene: 167622944
Centisome position: 23.7
GC content: 45.95
Gene sequence:
>444_bases ATGAGCCTAATTGATCAGCTAAAAGACCAAATGAAAGAAGCCATGCGCGCGAAAGAAAAGCTGCGTTTGGGGACTATTCG TATGGCACTAGCCGCCGTTAAACAGATTGAAGTGGATACCCGCGAAGCTCTGACTAACGACCAAGCTATAGCGGTCTTAA CCAAAATGGTAAAGCAGCGTCGTGACTCTATTGCTCAATATACAGCAGCAGGTCGTGACGAGCTAGCGCAGATAGAAGCA GAAGAAATTCTAGTTTTAGAAGAATTTTTGCCTCAACCTCTAACTGAAGAGGAAGTTACTGCGTTGGTTGATGCGAGCAT CTCTGAGATGGGAGCATCCACCATGGCGGATATGGGTAAAGTAATGGGAGCATTAAAACCAAAGGTAATGGGTAGAGCTG ACATGGCGGCAATTGGCGCTATGATCCGTGCAAAACTCAAGTAA
Upstream 100 bases:
>100_bases ACAACTGCACGTAAGCGTGCTAAAGCCGCTGCAGTTAAGCGTCTAGCTAAGAAGCTTTCTCGCGAAAACGCACGTCGCGT ACGTTTATATTAATCTCATT
Downstream 100 bases:
>100_bases CTTTAGTTTTATTGCATGAATGAGCCGTGCTTCTGCGCGGCTTGTTTGTTTTCGAAATTCCCAAATTTATTTCACGTGAT TTTTGATTTCACGTAACTTT
Product: GatB/YqeY domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSLIDQLKDQMKEAMRAKEKLRLGTIRMALAAVKQIEVDTREALTNDQAIAVLTKMVKQRRDSIAQYTAAGRDELAQIEA EEILVLEEFLPQPLTEEEVTALVDASISEMGASTMADMGKVMGALKPKVMGRADMAAIGAMIRAKLK
Sequences:
>Translated_147_residues MSLIDQLKDQMKEAMRAKEKLRLGTIRMALAAVKQIEVDTREALTNDQAIAVLTKMVKQRRDSIAQYTAAGRDELAQIEA EEILVLEEFLPQPLTEEEVTALVDASISEMGASTMADMGKVMGALKPKVMGRADMAAIGAMIRAKLK >Mature_146_residues SLIDQLKDQMKEAMRAKEKLRLGTIRMALAAVKQIEVDTREALTNDQAIAVLTKMVKQRRDSIAQYTAAGRDELAQIEAE EILVLEEFLPQPLTEEEVTALVDASISEMGASTMADMGKVMGALKPKVMGRADMAAIGAMIRAKLK
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 16120; Mature: 15989
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.2 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIDQLKDQMKEAMRAKEKLRLGTIRMALAAVKQIEVDTREALTNDQAIAVLTKMVKQR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RDSIAQYTAAGRDELAQIEAEEILVLEEFLPQPLTEEEVTALVDASISEMGASTMADMGK HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VMGALKPKVMGRADMAAIGAMIRAKLK HHHHHHHHHHCHHHHHHHHHHHHHHCC >Mature Secondary Structure SLIDQLKDQMKEAMRAKEKLRLGTIRMALAAVKQIEVDTREALTNDQAIAVLTKMVKQR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RDSIAQYTAAGRDELAQIEAEEILVLEEFLPQPLTEEEVTALVDASISEMGASTMADMGK HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VMGALKPKVMGRADMAAIGAMIRAKLK HHHHHHHHHHCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]