| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622909
Identifier: 167622909
GI number: 167622909
Start: 1191313
End: 1193136
Strand: Direct
Name: 167622909
Synonym: Shal_0969
Alternate gene names: NA
Gene position: 1191313-1193136 (Clockwise)
Preceding gene: 167622904
Following gene: 167622913
Centisome position: 22.79
GC content: 49.56
Gene sequence:
>1824_bases ATGAGATTAACAAAAATAGCTACGGCCCTAGTCGCCTTGTCTCTAGGCGTATCAGCAGGCGCTTCGGCTAGCGAAAGGTA TGTCATTCAGGTTGATAATGATAACAAAGGCGTGATTAAGGCGCTTGCTAAGAAGGTCGGTGGTGAGCTTAATTTGGATG GTAATGGATTTATCGCTGCGACCTTTTCGGGTAAAGATTTAGCTCAGGTTAAAGGCCTATTGAATAACCCTCATGCAAAA TTAGTTGAAGTGGATCAGCCTCGTTTCTTAATGTCATTTAGCGATGATGCGGGTAACCCAATGACGCAGCAAATCACCCC TTATGCTGTTTATCAATCAAACGTTAATGATATAGGCTTCAATGCCAGCGCAGGTATGAAGGTCTGTATAATCGACTCAG GTTTAGATAGAAGTAACGGTGATTTTGTTTGGAACAATATTAGTGGTGACAACGATGGTGGCACCGGTAATTGGGACGAA AATGGTGGGCCACACGGTACACATGTCGCGGGTACAATTGGTGCGGCTGACAACAATATCGGCGTTGTGGGTATGGCTCC TGGCGTCGATATGCATATCATTAAAGTATTCAATGCCGATGGTTGGGGCTACTCATCGGATCTCGCCCATGCAGCCAATC TATGTAGTGATGCGGGGGCGAATATTATTAGTATGAGCTTAGGTGGCGGAGGCTCTAACTCTACCGAGTCTAACGCTTTC CAGTCATTCAGTGATGCAGGTGGTCTAGTCGTGGCTGCTGCGGGTAATGATGGTAATAGCGTACGTTCATATCCAGCAGG TTATCCGTCTGTGATGATGGTGGGGGCAAATGATGCGACGGATACGATTGCAGACTTCTCACAATACCCAGGCTGTACGA CTGGCCGAGGCAAGAAGCAACGCACAGACACTAGTATCTGTGTCGAGATCGCCGCAGGTGGCGTAGATACCCTCTCGACT TATCCTGCGGGTATGGCGACGGCCTCTAATATGAGTGCCGATGGTAACCCGCTAGCCAGCTCAGCGATGGAGAACTCGGG TTCAGTCAACGGCAGTACTTATCATATGGGCACCGCTGAAGCGCAAGATTCGTCGGCCAATGGTAAGGTGTGTGTGATTG ATCGCGGCGCAATCTCATTCCATGACAAGGTACTTAATTGTGAGAACTCGGGGGGGATCGGTGCCATTATCATCAACAAT GAGCCAGGTATGCTGTATGGCACGCTAGGTGATACCAATGCTACGACGATCCCTGCAGCCGGTGCTACATTTGAAGACCG AACTGCTATCATTGCAGCAAGCAGTGCGAACCTCTCAATTGGTACCTCTGATTACGGCTTTATGAGTGGTACATCAATGG CGACTCCGGCTGTATCGGGCATTGCCGCGCGCGTTTGGTCTAACCATAACCAATGTACAGGTGAAGAGATCCGTGCGGCG CTAAATGCGAGTGCTAGAGACTCTGGTGCTAGCGGACACGATGTCTACTTTGGGCACGGTATTGCTGATGCGGCTGCCGC CGATACCTACCTAACGACAAACGGTTGTTCTGGTGGCGATGGTGGTGAGCCTAGTACGGGCGATGGCCTGAGCGTAACCA CCAACCACTATAAGCAAAAAGGTGTTAAGATTGTGGAGCTTAGCTTCAGTGGCGCAGCGGGTAGTAGTATCGATGTTTAC CGTAACGGTACGCAAATCGATAGTGCTTCTAGTGCCGCGACCTATACCGATACCATTACCAGTAAAGGTGGTGGTACCTA TACCTACAAGGCCTGTGATAGCGGAACATCAACTTGTAGTGCCGATGTCAGCGTGACCTTCTAA
Upstream 100 bases:
>100_bases GGTTTTTTTAACCAATAAACCACTAAAATTAAGTTTAAAAAACTAACAATAAATTGGCTTGGGTTTACGGCCTAATATCA AGATTTTGGAGCGAATAAAT
Downstream 100 bases:
>100_bases GAGTTAACCTCAAGTAGCAAAAGGCCTGCTGATGCAGGCCTTTTTTATGTTTAAGCTATAGTCAGTTCTAAATGTGTGTT TGCATATTTTGATCTTGATA
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: Ak.1 protease [H]
Number of amino acids: Translated: 607; Mature: 607
Protein sequence:
>607_residues MRLTKIATALVALSLGVSAGASASERYVIQVDNDNKGVIKALAKKVGGELNLDGNGFIAATFSGKDLAQVKGLLNNPHAK LVEVDQPRFLMSFSDDAGNPMTQQITPYAVYQSNVNDIGFNASAGMKVCIIDSGLDRSNGDFVWNNISGDNDGGTGNWDE NGGPHGTHVAGTIGAADNNIGVVGMAPGVDMHIIKVFNADGWGYSSDLAHAANLCSDAGANIISMSLGGGGSNSTESNAF QSFSDAGGLVVAAAGNDGNSVRSYPAGYPSVMMVGANDATDTIADFSQYPGCTTGRGKKQRTDTSICVEIAAGGVDTLST YPAGMATASNMSADGNPLASSAMENSGSVNGSTYHMGTAEAQDSSANGKVCVIDRGAISFHDKVLNCENSGGIGAIIINN EPGMLYGTLGDTNATTIPAAGATFEDRTAIIAASSANLSIGTSDYGFMSGTSMATPAVSGIAARVWSNHNQCTGEEIRAA LNASARDSGASGHDVYFGHGIADAAAADTYLTTNGCSGGDGGEPSTGDGLSVTTNHYKQKGVKIVELSFSGAAGSSIDVY RNGTQIDSASSAATYTDTITSKGGGTYTYKACDSGTSTCSADVSVTF
Sequences:
>Translated_607_residues MRLTKIATALVALSLGVSAGASASERYVIQVDNDNKGVIKALAKKVGGELNLDGNGFIAATFSGKDLAQVKGLLNNPHAK LVEVDQPRFLMSFSDDAGNPMTQQITPYAVYQSNVNDIGFNASAGMKVCIIDSGLDRSNGDFVWNNISGDNDGGTGNWDE NGGPHGTHVAGTIGAADNNIGVVGMAPGVDMHIIKVFNADGWGYSSDLAHAANLCSDAGANIISMSLGGGGSNSTESNAF QSFSDAGGLVVAAAGNDGNSVRSYPAGYPSVMMVGANDATDTIADFSQYPGCTTGRGKKQRTDTSICVEIAAGGVDTLST YPAGMATASNMSADGNPLASSAMENSGSVNGSTYHMGTAEAQDSSANGKVCVIDRGAISFHDKVLNCENSGGIGAIIINN EPGMLYGTLGDTNATTIPAAGATFEDRTAIIAASSANLSIGTSDYGFMSGTSMATPAVSGIAARVWSNHNQCTGEEIRAA LNASARDSGASGHDVYFGHGIADAAAADTYLTTNGCSGGDGGEPSTGDGLSVTTNHYKQKGVKIVELSFSGAAGSSIDVY RNGTQIDSASSAATYTDTITSKGGGTYTYKACDSGTSTCSADVSVTF >Mature_607_residues MRLTKIATALVALSLGVSAGASASERYVIQVDNDNKGVIKALAKKVGGELNLDGNGFIAATFSGKDLAQVKGLLNNPHAK LVEVDQPRFLMSFSDDAGNPMTQQITPYAVYQSNVNDIGFNASAGMKVCIIDSGLDRSNGDFVWNNISGDNDGGTGNWDE NGGPHGTHVAGTIGAADNNIGVVGMAPGVDMHIIKVFNADGWGYSSDLAHAANLCSDAGANIISMSLGGGGSNSTESNAF QSFSDAGGLVVAAAGNDGNSVRSYPAGYPSVMMVGANDATDTIADFSQYPGCTTGRGKKQRTDTSICVEIAAGGVDTLST YPAGMATASNMSADGNPLASSAMENSGSVNGSTYHMGTAEAQDSSANGKVCVIDRGAISFHDKVLNCENSGGIGAIIINN EPGMLYGTLGDTNATTIPAAGATFEDRTAIIAASSANLSIGTSDYGFMSGTSMATPAVSGIAARVWSNHNQCTGEEIRAA LNASARDSGASGHDVYFGHGIADAAAADTYLTTNGCSGGDGGEPSTGDGLSVTTNHYKQKGVKIVELSFSGAAGSSIDVY RNGTQIDSASSAATYTDTITSKGGGTYTYKACDSGTSTCSADVSVTF
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 61435; Mature: 61435
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTKIATALVALSLGVSAGASASERYVIQVDNDNKGVIKALAKKVGGELNLDGNGFIAA CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEECCCEEEEE TFSGKDLAQVKGLLNNPHAKLVEVDQPRFLMSFSDDAGNPMTQQITPYAVYQSNVNDIGF EECCCHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCHHCCCCEEEEECCCCCCCC NASAGMKVCIIDSGLDRSNGDFVWNNISGDNDGGTGNWDENGGPHGTHVAGTIGAADNNI CCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCE GVVGMAPGVDMHIIKVFNADGWGYSSDLAHAANLCSDAGANIISMSLGGGGSNSTESNAF EEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH QSFSDAGGLVVAAAGNDGNSVRSYPAGYPSVMMVGANDATDTIADFSQYPGCTTGRGKKQ HHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCC RTDTSICVEIAAGGVDTLSTYPAGMATASNMSADGNPLASSAMENSGSVNGSTYHMGTAE CCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCC AQDSSANGKVCVIDRGAISFHDKVLNCENSGGIGAIIINNEPGMLYGTLGDTNATTIPAA CCCCCCCCCEEEEECCCCEECCEEEECCCCCCEEEEEEECCCCEEEEECCCCCCEEECCC GATFEDRTAIIAASSANLSIGTSDYGFMSGTSMATPAVSGIAARVWSNHNQCTGEEIRAA CCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH LNASARDSGASGHDVYFGHGIADAAAADTYLTTNGCSGGDGGEPSTGDGLSVTTNHYKQK HCCCCCCCCCCCCEEEEECCCCHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEHHHHHHC GVKIVELSFSGAAGSSIDVYRNGTQIDSASSAATYTDTITSKGGGTYTYKACDSGTSTCS CCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEE ADVSVTF CEEEEEC >Mature Secondary Structure MRLTKIATALVALSLGVSAGASASERYVIQVDNDNKGVIKALAKKVGGELNLDGNGFIAA CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEECCCEEEEE TFSGKDLAQVKGLLNNPHAKLVEVDQPRFLMSFSDDAGNPMTQQITPYAVYQSNVNDIGF EECCCHHHHHHHHHCCCCCEEEEECCCEEEEEECCCCCCCCHHCCCCEEEEECCCCCCCC NASAGMKVCIIDSGLDRSNGDFVWNNISGDNDGGTGNWDENGGPHGTHVAGTIGAADNNI CCCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCE GVVGMAPGVDMHIIKVFNADGWGYSSDLAHAANLCSDAGANIISMSLGGGGSNSTESNAF EEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHH QSFSDAGGLVVAAAGNDGNSVRSYPAGYPSVMMVGANDATDTIADFSQYPGCTTGRGKKQ HHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCC RTDTSICVEIAAGGVDTLSTYPAGMATASNMSADGNPLASSAMENSGSVNGSTYHMGTAE CCCCEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCC AQDSSANGKVCVIDRGAISFHDKVLNCENSGGIGAIIINNEPGMLYGTLGDTNATTIPAA CCCCCCCCCEEEEECCCCEECCEEEECCCCCCEEEEEEECCCCEEEEECCCCCCEEECCC GATFEDRTAIIAASSANLSIGTSDYGFMSGTSMATPAVSGIAARVWSNHNQCTGEEIRAA CCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHH LNASARDSGASGHDVYFGHGIADAAAADTYLTTNGCSGGDGGEPSTGDGLSVTTNHYKQK HCCCCCCCCCCCCEEEEECCCCHHHCCCCEEEECCCCCCCCCCCCCCCCEEEEHHHHHHC GVKIVELSFSGAAGSSIDVYRNGTQIDSASSAATYTDTITSKGGGTYTYKACDSGTSTCS CCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCEE ADVSVTF CEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7993087; 10588904 [H]