| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is nemA [H]
Identifier: 167622896
GI number: 167622896
Start: 1177996
End: 1179033
Strand: Reverse
Name: nemA [H]
Synonym: Shal_0956
Alternate gene names: 167622896
Gene position: 1179033-1177996 (Counterclockwise)
Preceding gene: 167622898
Following gene: 167622894
Centisome position: 22.56
GC content: 44.51
Gene sequence:
>1038_bases ATGAAATACGCCCCCTTGTTTGAACCATATAAGCTAAGCGAACAACTGACACTAAAGAATCGTATAGTGATGGCGCCGAT GAATCGTAGTATGGCTGATGAGGAATTTCTCCCTACAGCAGCGATGATGAACTATTACGCTGGTCGGGCCGATACCGGTT TAATTATTTCCGAGTCGCTTATGATCTCCCAAAATGCCCAAGGCTATCCCAATACACCCGCAATCTATTTAGCTGAACAT GTCGCTGGCTGGAGAAAAATCACCGACAAGGTACATGAAAACGACGGTAAAATTTTTGCTCAGTTATGGCATACGGGCAG AGTTTCGCACCCTATTTATTTAGCAGGCCAGCAACCATGGGCTCCCTCAGCAGTGCCACTTGAGGGGCGTGTGCCTCGCA CCGATAATTTGCAATATGGCATCCCCAAAGAGATGACGGAGCAGGAGATAAAGCTAATCATTACTGAGTTTGCTAATGCC GCAGCCAATGCAAAAGAGGCTGGTTTTGACGGGGTCGAGATCCATGCTGCAAACGGTTATCTACTCGATCAGTTCTTACA TTGGGATACCAACCGACGCACTGATGCTTGGGGGGGAAGCGAAGAGAATATGAGCCGAATATTGTTTGAGGTTATCGATG CGGTAAAACAAAACATTACTCATGTTGGCGTCCGCTTGTCTCCCGTTGCTTATCTGAATCTTAAACATGATGAACGGGAT ATTCTTGTTTCTAACTACCTACTTCAACGTCTAAATGATTGTAATTTAAGCTACGTTCATACAGGTATGTTCGAAGACAC TTATCAAGCGCACTTACAAGGTAGCGTAACCCAGTACATTAAGAGTCTATATCACGGAACCATTATCGCTTGTGGTGGCT ATAACGCAGAAAGTGGCAGCATAGCCATAAATCAAGGTGATGCTAACTTAGTCGCAATTGGAAGACCACTGATCGCTAAC CCTGATTATGTTGAGAAAATACGCACTAAAAAGCCACTAACCGTCTACGATGCAGAGATGTTAAATCAACTCATTTAG
Upstream 100 bases:
>100_bases ATTAACACTATTCATTTCAGTCTAGTTCTATTCGCATTTACTGTCACCTATAGTTATCTAACACAATCTAATTTCTTTTC ATCTTCTCAGAGATCCTCTA
Downstream 100 bases:
>100_bases GCCTTGCCGATGATTAAAAACAACCGCGACAAGGGAGTCCTATTTTCCAATCTAGACCGCTATTTTAAACTGATTATTTA GCGGGAAATTTTGTCCGTTT
Product: NADH:flavin oxidoreductase/NADH oxidase
Products: NADP; Cytotoxic compound [C]
Alternate protein names: N-ethylmaleimide reducing enzyme [H]
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKYAPLFEPYKLSEQLTLKNRIVMAPMNRSMADEEFLPTAAMMNYYAGRADTGLIISESLMISQNAQGYPNTPAIYLAEH VAGWRKITDKVHENDGKIFAQLWHTGRVSHPIYLAGQQPWAPSAVPLEGRVPRTDNLQYGIPKEMTEQEIKLIITEFANA AANAKEAGFDGVEIHAANGYLLDQFLHWDTNRRTDAWGGSEENMSRILFEVIDAVKQNITHVGVRLSPVAYLNLKHDERD ILVSNYLLQRLNDCNLSYVHTGMFEDTYQAHLQGSVTQYIKSLYHGTIIACGGYNAESGSIAINQGDANLVAIGRPLIAN PDYVEKIRTKKPLTVYDAEMLNQLI
Sequences:
>Translated_345_residues MKYAPLFEPYKLSEQLTLKNRIVMAPMNRSMADEEFLPTAAMMNYYAGRADTGLIISESLMISQNAQGYPNTPAIYLAEH VAGWRKITDKVHENDGKIFAQLWHTGRVSHPIYLAGQQPWAPSAVPLEGRVPRTDNLQYGIPKEMTEQEIKLIITEFANA AANAKEAGFDGVEIHAANGYLLDQFLHWDTNRRTDAWGGSEENMSRILFEVIDAVKQNITHVGVRLSPVAYLNLKHDERD ILVSNYLLQRLNDCNLSYVHTGMFEDTYQAHLQGSVTQYIKSLYHGTIIACGGYNAESGSIAINQGDANLVAIGRPLIAN PDYVEKIRTKKPLTVYDAEMLNQLI >Mature_345_residues MKYAPLFEPYKLSEQLTLKNRIVMAPMNRSMADEEFLPTAAMMNYYAGRADTGLIISESLMISQNAQGYPNTPAIYLAEH VAGWRKITDKVHENDGKIFAQLWHTGRVSHPIYLAGQQPWAPSAVPLEGRVPRTDNLQYGIPKEMTEQEIKLIITEFANA AANAKEAGFDGVEIHAANGYLLDQFLHWDTNRRTDAWGGSEENMSRILFEVIDAVKQNITHVGVRLSPVAYLNLKHDERD ILVSNYLLQRLNDCNLSYVHTGMFEDTYQAHLQGSVTQYIKSLYHGTIIACGGYNAESGSIAINQGDANLVAIGRPLIAN PDYVEKIRTKKPLTVYDAEMLNQLI
Specific function: Catalyzes the reduction of N-ethylmaleimide (NEM) to N- ethylsuccinimide [H]
COG id: COG1902
COG function: function code C; NADH:flavin oxidoreductases, Old Yellow Enzyme family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NADH:flavin oxidoreductase/NADH oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1787939, Length=353, Percent_Identity=38.2436260623229, Blast_Score=229, Evalue=3e-61, Organism=Escherichia coli, GI1789463, Length=347, Percent_Identity=29.6829971181556, Blast_Score=132, Evalue=4e-32, Organism=Caenorhabditis elegans, GI17559804, Length=326, Percent_Identity=30.6748466257669, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17565138, Length=329, Percent_Identity=28.8753799392097, Blast_Score=114, Evalue=9e-26, Organism=Caenorhabditis elegans, GI17559802, Length=357, Percent_Identity=29.9719887955182, Blast_Score=112, Evalue=3e-25, Organism=Caenorhabditis elegans, GI72001454, Length=319, Percent_Identity=28.8401253918495, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17564188, Length=319, Percent_Identity=28.2131661442006, Blast_Score=103, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17540738, Length=349, Percent_Identity=25.7879656160458, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17566914, Length=358, Percent_Identity=25.6983240223464, Blast_Score=83, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6321973, Length=367, Percent_Identity=33.2425068119891, Blast_Score=155, Evalue=7e-39, Organism=Saccharomyces cerevisiae, GI6325086, Length=360, Percent_Identity=33.0555555555556, Blast_Score=148, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR001155 [H]
Pfam domain/function: PF00724 Oxidored_FMN [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 38688; Mature: 38688
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYAPLFEPYKLSEQLTLKNRIVMAPMNRSMADEEFLPTAAMMNYYAGRADTGLIISESL CCCCCCCCCHHCCCCEEECCEEEECCCCCCCCCHHHCCHHHHHHHHCCCCCCCEEEECEE MISQNAQGYPNTPAIYLAEHVAGWRKITDKVHENDGKIFAQLWHTGRVSHPIYLAGQQPW EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCCEEEECCCCC APSAVPLEGRVPRTDNLQYGIPKEMTEQEIKLIITEFANAAANAKEAGFDGVEIHAANGY CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEECCCH LLDQFLHWDTNRRTDAWGGSEENMSRILFEVIDAVKQNITHVGVRLSPVAYLNLKHDERD HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEECCCCHH ILVSNYLLQRLNDCNLSYVHTGMFEDTYQAHLQGSVTQYIKSLYHGTIIACGGYNAESGS HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCCCCC IAINQGDANLVAIGRPLIANPDYVEKIRTKKPLTVYDAEMLNQLI EEEECCCCEEEEECCCCCCCCHHHHHHHCCCCCEEECHHHHHHCC >Mature Secondary Structure MKYAPLFEPYKLSEQLTLKNRIVMAPMNRSMADEEFLPTAAMMNYYAGRADTGLIISESL CCCCCCCCCHHCCCCEEECCEEEECCCCCCCCCHHHCCHHHHHHHHCCCCCCCEEEECEE MISQNAQGYPNTPAIYLAEHVAGWRKITDKVHENDGKIFAQLWHTGRVSHPIYLAGQQPW EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHCCCCCCCEEEECCCCC APSAVPLEGRVPRTDNLQYGIPKEMTEQEIKLIITEFANAAANAKEAGFDGVEIHAANGY CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCEEEEECCCH LLDQFLHWDTNRRTDAWGGSEENMSRILFEVIDAVKQNITHVGVRLSPVAYLNLKHDERD HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEECCEEEEEECCCCHH ILVSNYLLQRLNDCNLSYVHTGMFEDTYQAHLQGSVTQYIKSLYHGTIIACGGYNAESGS HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCHHHHHHHHHHCCCEEEECCCCCCCCC IAINQGDANLVAIGRPLIANPDYVEKIRTKKPLTVYDAEMLNQLI EEEECCCCEEEEECCCCCCCCHHHHHHHCCCCCEEECHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADPH; N-ethylmaleimide [C]
Specific reaction: NADPH + N-ethylmaleimide = NADP + Cytotoxic compound [C]
General reaction: Reduction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9013822; 9278503 [H]