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The map label for this gene is 167622880

Identifier: 167622880

GI number: 167622880

Start: 1157856

End: 1158485

Strand: Direct

Name: 167622880

Synonym: Shal_0940

Alternate gene names: NA

Gene position: 1157856-1158485 (Clockwise)

Preceding gene: 167622876

Following gene: 167622881

Centisome position: 22.15

GC content: 47.78

Gene sequence:

>630_bases
ATGAAAACCAGCGATAAGATTTTGCAGATGTTAAAAACTCAAGGCGAGTTAAGCGCCAAAGTGATTGCCAGTGAGTTAGG
GCTAACTACGATGGGCGTGCGTCAGCATCTACAAAGCCTCGAAGAAAGTCGCGATGTGATTTTTGAAGATAGAAAGGCGA
TTCGGGGACGACCTACGCGTTTTTGGGCACTGACGCCGCAAAGTAATAGCCACTTTTCAGATAGGCACGAAGAGCTGACC
GTGCAGCTGATTGATTCGGTTAAAACCGTGTTTGGTGACAGTGGCTTAAATCAGCTTATTGCTCACCGAGAAGGAGCGTC
ACTTGCGCTGTATCGCAATGCATTAACCGCTACAGATACCTTAGCGGCAAAGCTACAAGTCTTGGCTCAGCTACGTACAG
ACGAAGGTTATATGGCGACAGTTAAATATAGTGACGGTTGCTATTGGCTACTTGAGAACCACTGTCCTATCTGCGCCGCG
GCATCAGCATGTGTTAACTTTTGCCGCTCAGAGTTACAGTTATTTCAGGCTTTGCTGCAAGATGAGGCGATAGTGAGCCG
CGAAGAACACATTATCGAAGGTGCACGTCGCTGTGCCTATAAAGTACAGCCCCACCCAGATGAGAAATAG

Upstream 100 bases:

>100_bases
AGTAATCGCCTTACAAAACAAAGTAAAGAAAAAAGTTTACTTAAGTCTCGGTTTAGCAATAATGGTTCGGTGGCCAATGA
GCTAAGCTGTAGGAAATTAA

Downstream 100 bases:

>100_bases
AGCTTTATGGAATCGAAACGTGCACGGCTAGATAGATTTATCAGCGTTAAAACAGGCATTAACAAAAAATACGTTAGATT
ACTGTTGGCTAAAGGGCAAG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: HTH Domain Family; ArsR Family Transcriptional Regulator; Transcriptional Regulatory Protein; DeoR Family Transcriptional Regulator; Transcription Regulator Protein; MarR Family Transcriptional Regulator; Regulatory Protein ArsR; Regulatory Proteins AsnC Family Protein; Transcriptional Regulator DeoR Family; Transcriptional Regulator Protein; Iron-Sulfur Cluster Biosynthesis Transcriptional Regulator; Helix-Turn-Helix Type; Sugar-Specific Transcriptional Regulator TrmB; HTH Domain Family Protein; Transcriptional Regulator TrmB

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKTSDKILQMLKTQGELSAKVIASELGLTTMGVRQHLQSLEESRDVIFEDRKAIRGRPTRFWALTPQSNSHFSDRHEELT
VQLIDSVKTVFGDSGLNQLIAHREGASLALYRNALTATDTLAAKLQVLAQLRTDEGYMATVKYSDGCYWLLENHCPICAA
ASACVNFCRSELQLFQALLQDEAIVSREEHIIEGARRCAYKVQPHPDEK

Sequences:

>Translated_209_residues
MKTSDKILQMLKTQGELSAKVIASELGLTTMGVRQHLQSLEESRDVIFEDRKAIRGRPTRFWALTPQSNSHFSDRHEELT
VQLIDSVKTVFGDSGLNQLIAHREGASLALYRNALTATDTLAAKLQVLAQLRTDEGYMATVKYSDGCYWLLENHCPICAA
ASACVNFCRSELQLFQALLQDEAIVSREEHIIEGARRCAYKVQPHPDEK
>Mature_209_residues
MKTSDKILQMLKTQGELSAKVIASELGLTTMGVRQHLQSLEESRDVIFEDRKAIRGRPTRFWALTPQSNSHFSDRHEELT
VQLIDSVKTVFGDSGLNQLIAHREGASLALYRNALTATDTLAAKLQVLAQLRTDEGYMATVKYSDGCYWLLENHCPICAA
ASACVNFCRSELQLFQALLQDEAIVSREEHIIEGARRCAYKVQPHPDEK

Specific function: Unknown

COG id: COG2345

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23450; Mature: 23450

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTSDKILQMLKTQGELSAKVIASELGLTTMGVRQHLQSLEESRDVIFEDRKAIRGRPTR
CCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
FWALTPQSNSHFSDRHEELTVQLIDSVKTVFGDSGLNQLIAHREGASLALYRNALTATDT
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEHHHHHHHHHHH
LAAKLQVLAQLRTDEGYMATVKYSDGCYWLLENHCPICAAASACVNFCRSELQLFQALLQ
HHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DEAIVSREEHIIEGARRCAYKVQPHPDEK
HHHHHHHHHHHHHHHHHCEECCCCCCCCC
>Mature Secondary Structure
MKTSDKILQMLKTQGELSAKVIASELGLTTMGVRQHLQSLEESRDVIFEDRKAIRGRPTR
CCCHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
FWALTPQSNSHFSDRHEELTVQLIDSVKTVFGDSGLNQLIAHREGASLALYRNALTATDT
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEHHHHHHHHHHH
LAAKLQVLAQLRTDEGYMATVKYSDGCYWLLENHCPICAAASACVNFCRSELQLFQALLQ
HHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DEAIVSREEHIIEGARRCAYKVQPHPDEK
HHHHHHHHHHHHHHHHHCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA