Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622851

Identifier: 167622851

GI number: 167622851

Start: 1129843

End: 1130238

Strand: Direct

Name: 167622851

Synonym: Shal_0911

Alternate gene names: NA

Gene position: 1129843-1130238 (Clockwise)

Preceding gene: 167622850

Following gene: 167622859

Centisome position: 21.62

GC content: 45.45

Gene sequence:

>396_bases
ATGCGCTTGTTGTCTTTGAGCATCGCTACGCTAATCGTGGCATCTTCAATTTCTGTTTCATCTACCGCTACAGCTAACCA
AGATCAATTGGCGGCAAACATATGCAATTATGTTCAGGCTGATGATAAAAACCGTTTACGTAAAAAGCTTAAAGAGAGCC
GTGTAAAGCTTCGTAATATATACAGCGGCGTGTCTTGTGGCGGCGACAGCTTATTGAGAACGGCGTTAAAAAGCGGTTCG
AATAAAGTAGGTACCTTTGTGGCTAAACGTCTTCCTGCATCAGATTTAAACGAAGTGGAAGCCGATGGGCAGAGCATTGT
CGCGTGGGCTGAAAGCAACGGTCATGGTGGCAGTGAAATCACAGTAGCGATTAAAGATCGCATTGCTGGCAGCTAG

Upstream 100 bases:

>100_bases
AATTCAAAGGGTTGTTTAGTACCCTGTATAACAAAAAAAGAGCGCTACTAGATAGCGCTACTTTTCTAATAAATAAAAAC
TAAAAAATAAGGAGTGTCTG

Downstream 100 bases:

>100_bases
GCGCTTGAAAGCGTATCTAAAATTACTGGGCCTGTCCCAGTATTTTTTTACCCTATTTTTATAGAAAAAGAGATGACAAG
AACAAGCCTATAGGCAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MRLLSLSIATLIVASSISVSSTATANQDQLAANICNYVQADDKNRLRKKLKESRVKLRNIYSGVSCGGDSLLRTALKSGS
NKVGTFVAKRLPASDLNEVEADGQSIVAWAESNGHGGSEITVAIKDRIAGS

Sequences:

>Translated_131_residues
MRLLSLSIATLIVASSISVSSTATANQDQLAANICNYVQADDKNRLRKKLKESRVKLRNIYSGVSCGGDSLLRTALKSGS
NKVGTFVAKRLPASDLNEVEADGQSIVAWAESNGHGGSEITVAIKDRIAGS
>Mature_131_residues
MRLLSLSIATLIVASSISVSSTATANQDQLAANICNYVQADDKNRLRKKLKESRVKLRNIYSGVSCGGDSLLRTALKSGS
NKVGTFVAKRLPASDLNEVEADGQSIVAWAESNGHGGSEITVAIKDRIAGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13821; Mature: 13821

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLSLSIATLIVASSISVSSTATANQDQLAANICNYVQADDKNRLRKKLKESRVKLRNI
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YSGVSCGGDSLLRTALKSGSNKVGTFVAKRLPASDLNEVEADGQSIVAWAESNGHGGSEI
HCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCCCCCCCEE
TVAIKDRIAGS
EEEEECCCCCC
>Mature Secondary Structure
MRLLSLSIATLIVASSISVSSTATANQDQLAANICNYVQADDKNRLRKKLKESRVKLRNI
CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
YSGVSCGGDSLLRTALKSGSNKVGTFVAKRLPASDLNEVEADGQSIVAWAESNGHGGSEI
HCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCCCCCCCEE
TVAIKDRIAGS
EEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA