Click here to switch to the map view.

The map label for this gene is yjjB [C]

Identifier: 167622849

GI number: 167622849

Start: 1128683

End: 1129156

Strand: Direct

Name: yjjB [C]

Synonym: Shal_0909

Alternate gene names: 167622849

Gene position: 1128683-1129156 (Clockwise)

Preceding gene: 167622848

Following gene: 167622850

Centisome position: 21.59

GC content: 45.36

Gene sequence:

>474_bases
ATGGTGTCGCTTATCTTAACCATGCTTAACGACGCAATTTTTTCGGCAATTCCAGCAATTGGTTTTGCAATGGTATTTAA
TGTGCCGCGTCGATTTTTACCCTATTGTGCAATTGCAGCAGCGATGGGCCATGGTAGCCGTACTCTATGGTTAAGTTTTG
GCTTGCCAATCGAATGGGCGACTTTCTTAGCCGCGGCTTTGGTCGGTATCGTGACGATAGCGTTTGCTAAAAAACATTTA
GCGCCACCATTAATGTATGCGGTAGCGGCAATTATTCCTATGATCCCTGGTACCTACGCATTTAATACTGTTATCGGTCT
GGTGCAATTAACGGCGCAGGCTGAAATGAGCCCAGAGCTTATTTATCAAGTCGTCAGTAATGGCCTTAAAACGGTATTTA
TCTTAGGTGCACTCTCGGTCGGACTTGCGATGCCGAGCCTACTTTATTTCCGCTCTCGCTCAGTCATTAAGTAA

Upstream 100 bases:

>100_bases
ATCTCAATGTGGGGATTTCTCGCTGGGGTCATGCCACTCTGCTTACCGTTGCTTCGGTTATTGGCATTACTATCGCAATG
CAGATCGGTGGACTGTTCTA

Downstream 100 bases:

>100_bases
CGAGAGTTCATTCATTTAGAACTGTTAATCAAGGGTTTGTTGATTAAAGGTTTGATGAAATCTATATATCCACTGTAGCC
GACATAAAAAAAAAGGGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MVSLILTMLNDAIFSAIPAIGFAMVFNVPRRFLPYCAIAAAMGHGSRTLWLSFGLPIEWATFLAAALVGIVTIAFAKKHL
APPLMYAVAAIIPMIPGTYAFNTVIGLVQLTAQAEMSPELIYQVVSNGLKTVFILGALSVGLAMPSLLYFRSRSVIK

Sequences:

>Translated_157_residues
MVSLILTMLNDAIFSAIPAIGFAMVFNVPRRFLPYCAIAAAMGHGSRTLWLSFGLPIEWATFLAAALVGIVTIAFAKKHL
APPLMYAVAAIIPMIPGTYAFNTVIGLVQLTAQAEMSPELIYQVVSNGLKTVFILGALSVGLAMPSLLYFRSRSVIK
>Mature_157_residues
MVSLILTMLNDAIFSAIPAIGFAMVFNVPRRFLPYCAIAAAMGHGSRTLWLSFGLPIEWATFLAAALVGIVTIAFAKKHL
APPLMYAVAAIIPMIPGTYAFNTVIGLVQLTAQAEMSPELIYQVVSNGLKTVFILGALSVGLAMPSLLYFRSRSVIK

Specific function: Unknown

COG id: COG3610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0442 family [H]

Homologues:

Organism=Escherichia coli, GI145693219, Length=152, Percent_Identity=44.078947368421, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010619
- InterPro:   IPR020914 [H]

Pfam domain/function: PF06738 DUF1212 [H]

EC number: NA

Molecular weight: Translated: 16848; Mature: 16848

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLILTMLNDAIFSAIPAIGFAMVFNVPRRFLPYCAIAAAMGHGSRTLWLSFGLPIEWA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH
TFLAAALVGIVTIAFAKKHLAPPLMYAVAAIIPMIPGTYAFNTVIGLVQLTAQAEMSPEL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHH
IYQVVSNGLKTVFILGALSVGLAMPSLLYFRSRSVIK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVSLILTMLNDAIFSAIPAIGFAMVFNVPRRFLPYCAIAAAMGHGSRTLWLSFGLPIEWA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH
TFLAAALVGIVTIAFAKKHLAPPLMYAVAAIIPMIPGTYAFNTVIGLVQLTAQAEMSPEL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHH
IYQVVSNGLKTVFILGALSVGLAMPSLLYFRSRSVIK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA