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The map label for this gene is yfeX [H]

Identifier: 167622840

GI number: 167622840

Start: 1121154

End: 1122086

Strand: Direct

Name: yfeX [H]

Synonym: Shal_0900

Alternate gene names: 167622840

Gene position: 1121154-1122086 (Clockwise)

Preceding gene: 167622839

Following gene: 167622843

Centisome position: 21.45

GC content: 42.02

Gene sequence:

>933_bases
ATGGATAGTCAGGTTATGCCTCGTGAACAGCTTGGAGTATGTGCAGAAGGAAACTTGCACAGTGTCTATTTAATGTTTAA
TGCTAATGATAGTGTTGAGTCTGATATGCGCCCTTGTGTGGCTAATGTCGCTCAATATGTTTATGAATTAGCTGATCAAT
ATTCTGATAGTGCATTTAATGGTTTTGTTGCTATTGGTGCTAATTATTGGGACACACTATACCCGATTGCTAGACCGGAA
CAGCTAAAACCTTTCCCTGCAATGAATAGAGATACTCGAGATGCACCCGCTATCGAATATGATCTATTTGTGCATGTCCG
TTGTGACCGTTTTGATATTTTACATTTAGTCGCCAATGAAGTTTGTCAGATGTTTGAAGGCTTAGTTGAACTTGTTGATG
AAGAGCGTGGCTTTAGGTTCTTAGACTCACGAGATCTCACGGGTTTTGTTGATGGCACTGAAAACCCGAAAGGACGCAGC
AGGCAGGACGTTGCACTTATTGGCGAGGAAGATAGCCGATTTAAAGGTGGTAGTTATATTCATGTGCAAAAGTATGCACA
TAACTTAAGCAAGTGGAACCGCCTACCCGTTAAGAAGCAAGAAGATATTGTTGGTCGTACTAAAGCTGACAATATTGAGT
ATGCATCGGCTGACAAACCGCTAACGAGTCACATCAAGCGTGTGAACTTGAAAGATAGCGAAGGTAACTCGATGGAGATC
TTACGACAAAGCATGCCTTACGGCTCCGCTAAAGAGCAAGGTTTGATGTTTATCTCTACTTGCCGCAACTCGGTTAATTT
CGAAAAGATGCTTGAGAGTATGGTGCATGGTGATGGCGAGGGTAACCATGATCACTTGATGCATTTCACTCAGGCATTAA
CTGGCTCTTCATTCTTTGCGCCATCGTTAGATTTTATGATTTCGTCTAACTAA

Upstream 100 bases:

>100_bases
AAAATTGATTTTAGTTATTGTGCGTTAGTTAATTTTATTAATAACTAAAGTTGTACATAATGTTGCCGAAAATTAATTAA
GATAAGGGTTACTTATAATA

Downstream 100 bases:

>100_bases
TTAAGACTTTTTAGCCAATAAAAAACGCACTGTATGGTGCGTTTTTTTATTGGGTGTATGAAAGCGAATTATTCATTATC
AACTTCATCTTTATCCCAGT

Product: Dyp-type peroxidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MDSQVMPREQLGVCAEGNLHSVYLMFNANDSVESDMRPCVANVAQYVYELADQYSDSAFNGFVAIGANYWDTLYPIARPE
QLKPFPAMNRDTRDAPAIEYDLFVHVRCDRFDILHLVANEVCQMFEGLVELVDEERGFRFLDSRDLTGFVDGTENPKGRS
RQDVALIGEEDSRFKGGSYIHVQKYAHNLSKWNRLPVKKQEDIVGRTKADNIEYASADKPLTSHIKRVNLKDSEGNSMEI
LRQSMPYGSAKEQGLMFISTCRNSVNFEKMLESMVHGDGEGNHDHLMHFTQALTGSSFFAPSLDFMISSN

Sequences:

>Translated_310_residues
MDSQVMPREQLGVCAEGNLHSVYLMFNANDSVESDMRPCVANVAQYVYELADQYSDSAFNGFVAIGANYWDTLYPIARPE
QLKPFPAMNRDTRDAPAIEYDLFVHVRCDRFDILHLVANEVCQMFEGLVELVDEERGFRFLDSRDLTGFVDGTENPKGRS
RQDVALIGEEDSRFKGGSYIHVQKYAHNLSKWNRLPVKKQEDIVGRTKADNIEYASADKPLTSHIKRVNLKDSEGNSMEI
LRQSMPYGSAKEQGLMFISTCRNSVNFEKMLESMVHGDGEGNHDHLMHFTQALTGSSFFAPSLDFMISSN
>Mature_310_residues
MDSQVMPREQLGVCAEGNLHSVYLMFNANDSVESDMRPCVANVAQYVYELADQYSDSAFNGFVAIGANYWDTLYPIARPE
QLKPFPAMNRDTRDAPAIEYDLFVHVRCDRFDILHLVANEVCQMFEGLVELVDEERGFRFLDSRDLTGFVDGTENPKGRS
RQDVALIGEEDSRFKGGSYIHVQKYAHNLSKWNRLPVKKQEDIVGRTKADNIEYASADKPLTSHIKRVNLKDSEGNSMEI
LRQSMPYGSAKEQGLMFISTCRNSVNFEKMLESMVHGDGEGNHDHLMHFTQALTGSSFFAPSLDFMISSN

Specific function: Unknown

COG id: COG2837

COG function: function code P; Predicted iron-dependent peroxidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DyP-type peroxidase family [H]

Homologues:

Organism=Escherichia coli, GI87082102, Length=305, Percent_Identity=36.7213114754098, Blast_Score=199, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR006314 [H]

Pfam domain/function: PF04261 Dyp_perox [H]

EC number: NA

Molecular weight: Translated: 35093; Mature: 35093

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSQVMPREQLGVCAEGNLHSVYLMFNANDSVESDMRPCVANVAQYVYELADQYSDSAFN
CCCCCCCHHHCCEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GFVAIGANYWDTLYPIARPEQLKPFPAMNRDTRDAPAIEYDLFVHVRCDRFDILHLVANE
CEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHH
VCQMFEGLVELVDEERGFRFLDSRDLTGFVDGTENPKGRSRQDVALIGEEDSRFKGGSYI
HHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCEE
HVQKYAHNLSKWNRLPVKKQEDIVGRTKADNIEYASADKPLTSHIKRVNLKDSEGNSMEI
EHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHH
LRQSMPYGSAKEQGLMFISTCRNSVNFEKMLESMVHGDGEGNHDHLMHFTQALTGSSFFA
HHHHCCCCCCCCCCCEEEEHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC
PSLDFMISSN
CCCCEEEECC
>Mature Secondary Structure
MDSQVMPREQLGVCAEGNLHSVYLMFNANDSVESDMRPCVANVAQYVYELADQYSDSAFN
CCCCCCCHHHCCEECCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
GFVAIGANYWDTLYPIARPEQLKPFPAMNRDTRDAPAIEYDLFVHVRCDRFDILHLVANE
CEEEECCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHH
VCQMFEGLVELVDEERGFRFLDSRDLTGFVDGTENPKGRSRQDVALIGEEDSRFKGGSYI
HHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCEE
HVQKYAHNLSKWNRLPVKKQEDIVGRTKADNIEYASADKPLTSHIKRVNLKDSEGNSMEI
EHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHH
LRQSMPYGSAKEQGLMFISTCRNSVNFEKMLESMVHGDGEGNHDHLMHFTQALTGSSFFA
HHHHCCCCCCCCCCCEEEEHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCC
PSLDFMISSN
CCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]