| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is aroG [H]
Identifier: 167622832
GI number: 167622832
Start: 1111617
End: 1112672
Strand: Direct
Name: aroG [H]
Synonym: Shal_0892
Alternate gene names: 167622832
Gene position: 1111617-1112672 (Clockwise)
Preceding gene: 167622831
Following gene: 167622834
Centisome position: 21.27
GC content: 45.64
Gene sequence:
>1056_bases ATGTATTACCAAAATGATGATGTTCGAATTAATAAGATTAAAGAGCTGTTACCTCCAATTGCAATTTTGGAACGATTTCC GGCAACAGAGAACGCATCAGCGACCGTATTTAATGCCCGTGAAAGCATACATAATATTTTAGCGAAGAAAGATGACCGAC TATTGGTGGTGATCGGCCCGTGTTCTATTCATGATCCCGCGGCAGCGATCGAGTACGGTAAACGTTTAGTTGAACTCAGA GAGCGCTACAAAGAACAGCTAGAGATCGTGATGCGAGTCTACTTTGAAAAGCCGCGCACCACTGTTGGCTGGAAAGGTCT GATCAACGATCCAGACATGGATAATAGCTTCAAGCTAAATGATGGTTTGCGTACTGCGCGAAAGCTGCTGTTAGACTTAA ACAACATTGGCCTGCCTACGGCTGGTGAGTTTTTAGATATGATCACGCCGCAGTATGTGGCCGATCTCATGTGTTGGGGG GCAATTGGTGCCCGTACGACTGAGTCTCAAGTACATCGTGAATTGGCATCGGGTCTATCAAGCGCAGTTGGTTTCAAAAA TGGTACAGATGGTACCATCAAGGTGGCTATTGACGCTATCGGTGCAGCCAGTGCACCACATCACTTCTTATCTGTGACTA AGTTTGGCCATTCGGCGATTGTCGAGACTAAGGGAAATCCTGACTGTCATATTATTTTACGTGGCGGTAAAGAGCCTAAC TATAGTGCCGAACATGTGGCCGAAATTAATCAACAATTGGATAAGGCTGGTCTTGCGAAAAACATCATGATTGACTTTAG CCACGCAAATAGTAGTAAACAGTTCAAACGTCAGATGCTGGTTTGCGATGATGTTGCAGCACAAATGGCGAACGGTGATA GCTCCATCTTTGGCGTAATGGTAGAAAGCAACTTGATTGAAGGGCGCCAGGATCACATCGAAGGACACTCACTTTGCTAC GGCCAGAGTGTGACGGACGCTTGCATCGGTTGGCAAGATACTGAAAAGCTGCTGGCAACACTTAATGATAGTGTTGTTAA GCGTAGAGTCGCTTAA
Upstream 100 bases:
>100_bases TCATAACTTGATTGCAATCCAAGTTCATACTGGATAAATTGAATGCAGTATCGCAATTGAGAGATCTGTATTCATAGGCT AGACGGAGCTAAGTATTACC
Downstream 100 bases:
>100_bases TTGATAAAAACAAAAAAAGGAGGCATTAGCCTCCTTTTTTGATCACTTACTTAGTGAGATAAAATTATTTTCTATCTTGT TCAAGTAAATACTCATTGGC
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MYYQNDDVRINKIKELLPPIAILERFPATENASATVFNARESIHNILAKKDDRLLVVIGPCSIHDPAAAIEYGKRLVELR ERYKEQLEIVMRVYFEKPRTTVGWKGLINDPDMDNSFKLNDGLRTARKLLLDLNNIGLPTAGEFLDMITPQYVADLMCWG AIGARTTESQVHRELASGLSSAVGFKNGTDGTIKVAIDAIGAASAPHHFLSVTKFGHSAIVETKGNPDCHIILRGGKEPN YSAEHVAEINQQLDKAGLAKNIMIDFSHANSSKQFKRQMLVCDDVAAQMANGDSSIFGVMVESNLIEGRQDHIEGHSLCY GQSVTDACIGWQDTEKLLATLNDSVVKRRVA
Sequences:
>Translated_351_residues MYYQNDDVRINKIKELLPPIAILERFPATENASATVFNARESIHNILAKKDDRLLVVIGPCSIHDPAAAIEYGKRLVELR ERYKEQLEIVMRVYFEKPRTTVGWKGLINDPDMDNSFKLNDGLRTARKLLLDLNNIGLPTAGEFLDMITPQYVADLMCWG AIGARTTESQVHRELASGLSSAVGFKNGTDGTIKVAIDAIGAASAPHHFLSVTKFGHSAIVETKGNPDCHIILRGGKEPN YSAEHVAEINQQLDKAGLAKNIMIDFSHANSSKQFKRQMLVCDDVAAQMANGDSSIFGVMVESNLIEGRQDHIEGHSLCY GQSVTDACIGWQDTEKLLATLNDSVVKRRVA >Mature_351_residues MYYQNDDVRINKIKELLPPIAILERFPATENASATVFNARESIHNILAKKDDRLLVVIGPCSIHDPAAAIEYGKRLVELR ERYKEQLEIVMRVYFEKPRTTVGWKGLINDPDMDNSFKLNDGLRTARKLLLDLNNIGLPTAGEFLDMITPQYVADLMCWG AIGARTTESQVHRELASGLSSAVGFKNGTDGTIKVAIDAIGAASAPHHFLSVTKFGHSAIVETKGNPDCHIILRGGKEPN YSAEHVAEINQQLDKAGLAKNIMIDFSHANSSKQFKRQMLVCDDVAAQMANGDSSIFGVMVESNLIEGRQDHIEGHSLCY GQSVTDACIGWQDTEKLLATLNDSVVKRRVA
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=349, Percent_Identity=74.4985673352435, Blast_Score=545, Evalue=1e-156, Organism=Escherichia coli, GI1787996, Length=345, Percent_Identity=53.3333333333333, Blast_Score=394, Evalue=1e-111, Organism=Escherichia coli, GI1788953, Length=334, Percent_Identity=52.9940119760479, Blast_Score=369, Evalue=1e-103, Organism=Saccharomyces cerevisiae, GI6319726, Length=347, Percent_Identity=54.7550432276657, Blast_Score=367, Evalue=1e-102, Organism=Saccharomyces cerevisiae, GI6320240, Length=368, Percent_Identity=52.7173913043478, Blast_Score=365, Evalue=1e-102,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38719; Mature: 38719
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYQNDDVRINKIKELLPPIAILERFPATENASATVFNARESIHNILAKKDDRLLVVIGP CCCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCCCCEEEEECC CSIHDPAAAIEYGKRLVELRERYKEQLEIVMRVYFEKPRTTVGWKGLINDPDMDNSFKLN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECC DGLRTARKLLLDLNNIGLPTAGEFLDMITPQYVADLMCWGAIGARTTESQVHRELASGLS HHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SAVGFKNGTDGTIKVAIDAIGAASAPHHFLSVTKFGHSAIVETKGNPDCHIILRGGKEPN HHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCC YSAEHVAEINQQLDKAGLAKNIMIDFSHANSSKQFKRQMLVCDDVAAQMANGDSSIFGVM CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VESNLIEGRQDHIEGHSLCYGQSVTDACIGWQDTEKLLATLNDSVVKRRVA EECHHHCCCHHHCCCCCEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYYQNDDVRINKIKELLPPIAILERFPATENASATVFNARESIHNILAKKDDRLLVVIGP CCCCCCCCHHHHHHHHHCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCCCCEEEEECC CSIHDPAAAIEYGKRLVELRERYKEQLEIVMRVYFEKPRTTVGWKGLINDPDMDNSFKLN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECC DGLRTARKLLLDLNNIGLPTAGEFLDMITPQYVADLMCWGAIGARTTESQVHRELASGLS HHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH SAVGFKNGTDGTIKVAIDAIGAASAPHHFLSVTKFGHSAIVETKGNPDCHIILRGGKEPN HHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCC YSAEHVAEINQQLDKAGLAKNIMIDFSHANSSKQFKRQMLVCDDVAAQMANGDSSIFGVM CCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEE VESNLIEGRQDHIEGHSLCYGQSVTDACIGWQDTEKLLATLNDSVVKRRVA EECHHHCCCHHHCCCCCEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]