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The map label for this gene is 167622831

Identifier: 167622831

GI number: 167622831

Start: 1109935

End: 1111137

Strand: Direct

Name: 167622831

Synonym: Shal_0891

Alternate gene names: NA

Gene position: 1109935-1111137 (Clockwise)

Preceding gene: 167622830

Following gene: 167622832

Centisome position: 21.23

GC content: 45.3

Gene sequence:

>1203_bases
ATGCTTAATGCACTGAGCCCTTGTGTTGAGTGTGTAATGAATCGAACTATTTTGTTGCTAGTGATTATGCTGACCAGCCT
CTTTTGCGGCTGTGCGAGTCAGGCGCCTGAACCTGCCCAAGATCTACATGCTTATTTTCATGACCAGCATTTTAGTCCGG
CTAATGGACTCCCAAGTGCCGATGAGCTGTTTGATTTACCTGATGAGGCCGTGGTTAGCCTTAAGCGGGAACTGATGCGC
TCGAAGAGCTTTTTGCAGCAAAATAATGTGATGATGCATGAATGGTTAGCAAACTACATTAATGCAGCCGATGGCGGTTT
TCGTTACGCCGATAATGTGACTCGCCTTGCTAGTGATACTTTTAATGACAGAGAGGGTAACTGTTTGTCGTTAGTGGTAT
TAACCGCTGCGCTCGCCGAAGAGATAGGGGTTAAGGTTGAGTTTCAAGAGATAGGGATCCCGCCAGTGTGGGACAGGCAA
GGAGGCTTCTATCTGGTTAATGGTCACATTAACTTGAAGCTGTTACCTCAAGATAATGGCAATGTCTTCAACATCTCTAC
CCGCTCTATACAAATCGATTTTTTACCTGAGCGTGCTATGCAGGGATATAAAAAGCAACGGGTCAACAAGTCTACTGTTA
TCTCTATGTTTTATAACAATATTGCCGCGGAGGCATTAGTTGATGGAGATTATGATCGTGCCTATGGATTACTGAAGTTG
GCACTTGCCGAACAGAGCCATTTTTTACCTGCCTTGAATACTCTGGCGGTGCTCTATCGCTATAAAGGACTCAGCTCGCA
AGCTGAGGCACTTTATCAATACACCTTGAGGGTAAATCCTGAAGATATGAATGCGCTAAATAATTACGCCATCATGTTGT
CTGCGCAAGATAGACTCGATGAATGGGCCGATGTGCATAAAGTGTTGGAGCTAGCGCGTATACGTAACCCCTATTATTAC
TATGGTATGGCGCAGCAAGCTTACTTTGATAAAGACTATCAGGACGCCCTACTTTGGTATAAGCGAGCGATAGCCAAAGC
CGATTACCGCCATGAGTTTTATTTTGGTCTATCGCGAACGTATTGGGTGACGGGCGATGAAATGCGTGCACAGCAGAGCT
TAAAGAAGGCACTCAGCTTAACGACAGATGGCCAGCATAAACGTCGATATCAATCGAAACTGCATGCGATGAGCAGTCAC
TAA

Upstream 100 bases:

>100_bases
AGGTCCCACTTAACTAGCACTTAGGATACGCTGCAAAAGCGTCAATCGTTAGATTTACGTTTTGTAACGCATTTACCCTA
TAGCTTGTCATTCATGGCAT

Downstream 100 bases:

>100_bases
GAAACTCTGTTGTTAACAGAACCTATGTCAGCTAATAGTCTGTGCGTTCACTTTCTGCATGATCCCGTATACCTCAAGTT
TTAAGCCCTTAGTTCAATTG

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; TPR Domain Protein; Tetratricopeptide TPR_2 Repeat-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MLNALSPCVECVMNRTILLLVIMLTSLFCGCASQAPEPAQDLHAYFHDQHFSPANGLPSADELFDLPDEAVVSLKRELMR
SKSFLQQNNVMMHEWLANYINAADGGFRYADNVTRLASDTFNDREGNCLSLVVLTAALAEEIGVKVEFQEIGIPPVWDRQ
GGFYLVNGHINLKLLPQDNGNVFNISTRSIQIDFLPERAMQGYKKQRVNKSTVISMFYNNIAAEALVDGDYDRAYGLLKL
ALAEQSHFLPALNTLAVLYRYKGLSSQAEALYQYTLRVNPEDMNALNNYAIMLSAQDRLDEWADVHKVLELARIRNPYYY
YGMAQQAYFDKDYQDALLWYKRAIAKADYRHEFYFGLSRTYWVTGDEMRAQQSLKKALSLTTDGQHKRRYQSKLHAMSSH

Sequences:

>Translated_400_residues
MLNALSPCVECVMNRTILLLVIMLTSLFCGCASQAPEPAQDLHAYFHDQHFSPANGLPSADELFDLPDEAVVSLKRELMR
SKSFLQQNNVMMHEWLANYINAADGGFRYADNVTRLASDTFNDREGNCLSLVVLTAALAEEIGVKVEFQEIGIPPVWDRQ
GGFYLVNGHINLKLLPQDNGNVFNISTRSIQIDFLPERAMQGYKKQRVNKSTVISMFYNNIAAEALVDGDYDRAYGLLKL
ALAEQSHFLPALNTLAVLYRYKGLSSQAEALYQYTLRVNPEDMNALNNYAIMLSAQDRLDEWADVHKVLELARIRNPYYY
YGMAQQAYFDKDYQDALLWYKRAIAKADYRHEFYFGLSRTYWVTGDEMRAQQSLKKALSLTTDGQHKRRYQSKLHAMSSH
>Mature_400_residues
MLNALSPCVECVMNRTILLLVIMLTSLFCGCASQAPEPAQDLHAYFHDQHFSPANGLPSADELFDLPDEAVVSLKRELMR
SKSFLQQNNVMMHEWLANYINAADGGFRYADNVTRLASDTFNDREGNCLSLVVLTAALAEEIGVKVEFQEIGIPPVWDRQ
GGFYLVNGHINLKLLPQDNGNVFNISTRSIQIDFLPERAMQGYKKQRVNKSTVISMFYNNIAAEALVDGDYDRAYGLLKL
ALAEQSHFLPALNTLAVLYRYKGLSSQAEALYQYTLRVNPEDMNALNNYAIMLSAQDRLDEWADVHKVLELARIRNPYYY
YGMAQQAYFDKDYQDALLWYKRAIAKADYRHEFYFGLSRTYWVTGDEMRAQQSLKKALSLTTDGQHKRRYQSKLHAMSSH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45670; Mature: 45670

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNALSPCVECVMNRTILLLVIMLTSLFCGCASQAPEPAQDLHAYFHDQHFSPANGLPSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCH
DELFDLPDEAVVSLKRELMRSKSFLQQNNVMMHEWLANYINAADGGFRYADNVTRLASDT
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
FNDREGNCLSLVVLTAALAEEIGVKVEFQEIGIPPVWDRQGGFYLVNGHINLKLLPQDNG
CCCCCCCHHHHHHHHHHHHHHHCCEEEEHHCCCCCCEECCCCEEEEECEEEEEEEECCCC
NVFNISTRSIQIDFLPERAMQGYKKQRVNKSTVISMFYNNIAAEALVDGDYDRAYGLLKL
CEEEEEEEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ALAEQSHFLPALNTLAVLYRYKGLSSQAEALYQYTLRVNPEDMNALNNYAIMLSAQDRLD
HHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECHHHHHHCCCEEEEEECHHHHH
EWADVHKVLELARIRNPYYYYGMAQQAYFDKDYQDALLWYKRAIAKADYRHEFYFGLSRT
HHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHCCCHHEEEECCEE
YWVTGDEMRAQQSLKKALSLTTDGQHKRRYQSKLHAMSSH
EEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNALSPCVECVMNRTILLLVIMLTSLFCGCASQAPEPAQDLHAYFHDQHFSPANGLPSA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCH
DELFDLPDEAVVSLKRELMRSKSFLQQNNVMMHEWLANYINAADGGFRYADNVTRLASDT
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCC
FNDREGNCLSLVVLTAALAEEIGVKVEFQEIGIPPVWDRQGGFYLVNGHINLKLLPQDNG
CCCCCCCHHHHHHHHHHHHHHHCCEEEEHHCCCCCCEECCCCEEEEECEEEEEEEECCCC
NVFNISTRSIQIDFLPERAMQGYKKQRVNKSTVISMFYNNIAAEALVDGDYDRAYGLLKL
CEEEEEEEEEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ALAEQSHFLPALNTLAVLYRYKGLSSQAEALYQYTLRVNPEDMNALNNYAIMLSAQDRLD
HHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHEEECHHHHHHCCCEEEEEECHHHHH
EWADVHKVLELARIRNPYYYYGMAQQAYFDKDYQDALLWYKRAIAKADYRHEFYFGLSRT
HHHHHHHHHHHHHHCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHCCCHHEEEECCEE
YWVTGDEMRAQQSLKKALSLTTDGQHKRRYQSKLHAMSSH
EEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA