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The map label for this gene is narP [H]

Identifier: 167622824

GI number: 167622824

Start: 1102701

End: 1103336

Strand: Reverse

Name: narP [H]

Synonym: Shal_0884

Alternate gene names: 167622824

Gene position: 1103336-1102701 (Counterclockwise)

Preceding gene: 167622825

Following gene: 167622822

Centisome position: 21.11

GC content: 44.65

Gene sequence:

>636_bases
ATGGGAAAGCCCTATTCGGTTCTAGTAATTGATGATCACCCACTATTACGACGTGGGATCTGTCAGCTTGTCACTTCTGA
CTCAGACTTTACCCTGTTTGGTGAAGCGGGCAGTGGTCTAGATGCGCTATCAGCAGTTAGCGATAACGAGCCTGATATTA
TATTGCTCGACCTTAATATGAAGGGAATGACGGGTTTAGACACACTGAATGCCTTAAGGCAAGAAGGCGTCACCTCTCGT
ATCGTGATTTTAACGGTATCCGATGCCAAGCAGGACGTGATTCGTTTAGTTCGTGCAGGTGCTGACGGTTATTTATTAAA
AGACACCGAGCCTGATTTACTACTTGATATGCTCAAAAATGCCATGCTCGGCCATCGTGTTATTAGTAATACTGTTCAAG
AATATTTGTCGGAACTAAATAGTTCAGTCAATGAGCAAGAGTGGATCGAGAACCTTACCCCTAGAGAGCTCGAAATTCTC
CAGCATTTGGCCGAAGGTCAAAGCAACCGTATCGTTGCAGAACAGCTTCATATTAGCGAGGGAACAGTAAAGGTGCATGT
GAAAAACTTACTGCGTAAAGCCAACGCCAAGTCTCGTACAGAGATGGCAGTACGCTACCTAAATCAGCAATCCTAA

Upstream 100 bases:

>100_bases
CAGAATAGGAAATACACCTATCGAGCTCGTTTTCTCAAAGGGAACAATGATTTTTTAGCATATTTACTTAGACGTATATA
CCTCAGCAGGAGGCCTTAAA

Downstream 100 bases:

>100_bases
GCCAGTAAGATAGACGATTAGATCAAAAAAGCAGCCAAAGGCTGCTTTTTTCGTTCTTAATTTGCTCGAAAATAAATCTG
AAGATCGGCAATCATTTTTC

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MGKPYSVLVIDDHPLLRRGICQLVTSDSDFTLFGEAGSGLDALSAVSDNEPDIILLDLNMKGMTGLDTLNALRQEGVTSR
IVILTVSDAKQDVIRLVRAGADGYLLKDTEPDLLLDMLKNAMLGHRVISNTVQEYLSELNSSVNEQEWIENLTPRELEIL
QHLAEGQSNRIVAEQLHISEGTVKVHVKNLLRKANAKSRTEMAVRYLNQQS

Sequences:

>Translated_211_residues
MGKPYSVLVIDDHPLLRRGICQLVTSDSDFTLFGEAGSGLDALSAVSDNEPDIILLDLNMKGMTGLDTLNALRQEGVTSR
IVILTVSDAKQDVIRLVRAGADGYLLKDTEPDLLLDMLKNAMLGHRVISNTVQEYLSELNSSVNEQEWIENLTPRELEIL
QHLAEGQSNRIVAEQLHISEGTVKVHVKNLLRKANAKSRTEMAVRYLNQQS
>Mature_210_residues
GKPYSVLVIDDHPLLRRGICQLVTSDSDFTLFGEAGSGLDALSAVSDNEPDIILLDLNMKGMTGLDTLNALRQEGVTSRI
VILTVSDAKQDVIRLVRAGADGYLLKDTEPDLLLDMLKNAMLGHRVISNTVQEYLSELNSSVNEQEWIENLTPRELEILQ
HLAEGQSNRIVAEQLHISEGTVKVHVKNLLRKANAKSRTEMAVRYLNQQS

Specific function: This protein activates the expression of the nitrate reductase (narGHJI) and formate dehydrogenase-N (fdnGHI) operons and represses the transcription of the fumarate reductase (frdABCD) operon in response to a nitrate/nitrite induction signal transmitted

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=207, Percent_Identity=50.2415458937198, Blast_Score=209, Evalue=9e-56,
Organism=Escherichia coli, GI1787473, Length=211, Percent_Identity=44.0758293838863, Blast_Score=150, Evalue=6e-38,
Organism=Escherichia coli, GI1788222, Length=205, Percent_Identity=29.2682926829268, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1790102, Length=203, Percent_Identity=28.5714285714286, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788712, Length=193, Percent_Identity=24.8704663212435, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI1786747, Length=200, Percent_Identity=24.5, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23390; Mature: 23259

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKPYSVLVIDDHPLLRRGICQLVTSDSDFTLFGEAGSGLDALSAVSDNEPDIILLDLNM
CCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCEEEEECCC
KGMTGLDTLNALRQEGVTSRIVILTVSDAKQDVIRLVRAGADGYLLKDTEPDLLLDMLKN
CCCCCHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
AMLGHRVISNTVQEYLSELNSSVNEQEWIENLTPRELEILQHLAEGQSNRIVAEQLHISE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHEECCC
GTVKVHVKNLLRKANAKSRTEMAVRYLNQQS
CEEEEHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKPYSVLVIDDHPLLRRGICQLVTSDSDFTLFGEAGSGLDALSAVSDNEPDIILLDLNM
CCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCCCEEEEECCC
KGMTGLDTLNALRQEGVTSRIVILTVSDAKQDVIRLVRAGADGYLLKDTEPDLLLDMLKN
CCCCCHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHH
AMLGHRVISNTVQEYLSELNSSVNEQEWIENLTPRELEILQHLAEGQSNRIVAEQLHISE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCEEHHHEECCC
GTVKVHVKNLLRKANAKSRTEMAVRYLNQQS
CEEEEHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8501030; 9278503 [H]