| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622822
Identifier: 167622822
GI number: 167622822
Start: 1100734
End: 1102059
Strand: Reverse
Name: 167622822
Synonym: Shal_0882
Alternate gene names: NA
Gene position: 1102059-1100734 (Counterclockwise)
Preceding gene: 167622824
Following gene: 167622820
Centisome position: 21.08
GC content: 47.21
Gene sequence:
>1326_bases ATGCCCACAACAAAACCAGTAGTCTGTTTAAGCATTACCACTGCGCTAGCCTTATCCACACTTAGCCCACCTTTATATGC TCAGAGTGAAATCTTTGACGGACAGTCAGGCACCATTTCAGACATAGGTGATGTGGTACAGATTGCTCTGCCCGCTGGTG CGCTTATCGGTAGCCTCTGGATCGGTGATACAGAAGGCGCTTGGCAATTAACCAAAGGCGTTGCGGCAACGGCCGCCATC ACCCATACCATGAAATTTGGTTATGAACGGCTTCGCCCTGATGGTAGCGAGAGTAATTCCTTCCCATCGGGCCATACCTC CGCGGCATTCTCAGGTGCAGCCTACATTCATCATAGATACGGTAATACATGGGGCATACCAGCCTACGCAGCAGCCACTT TTGTTGGCGCAAGCCGAGTCTGGGCTAACCGCCATTATGTGGACGATGTTTTGGCGGGCGGATCGATTGCGGTATTAAGT AGTTTATATTTTACTGATCCTTACAATAATTCAGATCTGGTTGTAGTACCCAGCTTTGGTGAAAACCATATTGGGTTAGC AATGAGCTATACCCCAGGTCTCAATGGCCCTAAAGACAAGAGGCCAAACCAAAATACCGAAATTTGGGGTGAAAAAAAAC AGACCTTGCTGCACAGCTATTCGCTGTTAGTGGGTGGCTTCGATACCGAGAAGAACCAGATCAACGAAGTAGGCCAAGAC AGCTTCGATCTTTATGACTTCAGCCGCGAATCGGAACCTAACACCTATGCCGCAGCGCAACTGCGCTGGGGACTCGATGA ATCTCAATATCTTTCATTTGGTTTTGCCCCGATGGAAGCTCGAGACACCACGATATTGAAACAAGATATCAATTTTGGTG GAAAGAGTTACCACGCAGGTTCAGAAGTCGTTTCTGCCTATCGAAATTGGATGTTGAGTGCGGATTACGTCTACAAGCTA CTCGCAGATAGCGACTGGATTCTCGATGTCGGTGGCGGAGTCAGTATTGTTGGGCAATCGATTCGCCTAGATAACATCAA TGGTGAGAATTTAAGTGAATATGACGATCTGTTTTTTACGCCAGCTGCGAGTATAGAGGCGGGTTATCACTTTACCGAGA GTCTCTCGACCACCATAGGGTATCGCATCTCAGGTTTATCCGATTTCGATCAAGAAAGTCTGTGGCTAAGTATTAACTAT CAGTTGAATGATCGTTGGGCTACCTCCCTGTTTGCCGGACAGATCAATCAAACTACTGATACCGATGACTACTACAACGA TGCACAGTTCGATTATGGCGGATTTGCCGTGACTTACGCATTTTAA
Upstream 100 bases:
>100_bases AAATACCCCACCAAACCAAACTCACAAAAACGCAACCAATTTAAAACAGTCGAAACAAAAATTGATACAATCAACAAAAT TTATTACAAGGACGACCGCA
Downstream 100 bases:
>100_bases TACTTAAATCAAGCCAATAAAAAAGGACGCATATTGCGTCCTTTTTCAGTTCAATCGTTGACGAGCAAATTAGTGTGCGT GTGCAGCATCTGCTTCAGCA
Product: PA-phosphatase-like phosphoesterase
Products: NA
Alternate protein names: PAP2 Family Protein; PAP2 Superfamily Protein; Phosphoesterase PA-Phosphatase Related Protein; Membrane-Associated Phospholipid Phosphatase; Phosphoesterase; PAP2 Family Phosphoesterase; Phosphoesterase PA-Phosphatase-Like Protein; Secreted PAP2 Superfamily Protein; Membrane-Associated Phosphoesterase; Phosphoesterase PAP2 Family; PAP2 Superfamily Membrane Protein
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MPTTKPVVCLSITTALALSTLSPPLYAQSEIFDGQSGTISDIGDVVQIALPAGALIGSLWIGDTEGAWQLTKGVAATAAI THTMKFGYERLRPDGSESNSFPSGHTSAAFSGAAYIHHRYGNTWGIPAYAAATFVGASRVWANRHYVDDVLAGGSIAVLS SLYFTDPYNNSDLVVVPSFGENHIGLAMSYTPGLNGPKDKRPNQNTEIWGEKKQTLLHSYSLLVGGFDTEKNQINEVGQD SFDLYDFSRESEPNTYAAAQLRWGLDESQYLSFGFAPMEARDTTILKQDINFGGKSYHAGSEVVSAYRNWMLSADYVYKL LADSDWILDVGGGVSIVGQSIRLDNINGENLSEYDDLFFTPAASIEAGYHFTESLSTTIGYRISGLSDFDQESLWLSINY QLNDRWATSLFAGQINQTTDTDDYYNDAQFDYGGFAVTYAF
Sequences:
>Translated_441_residues MPTTKPVVCLSITTALALSTLSPPLYAQSEIFDGQSGTISDIGDVVQIALPAGALIGSLWIGDTEGAWQLTKGVAATAAI THTMKFGYERLRPDGSESNSFPSGHTSAAFSGAAYIHHRYGNTWGIPAYAAATFVGASRVWANRHYVDDVLAGGSIAVLS SLYFTDPYNNSDLVVVPSFGENHIGLAMSYTPGLNGPKDKRPNQNTEIWGEKKQTLLHSYSLLVGGFDTEKNQINEVGQD SFDLYDFSRESEPNTYAAAQLRWGLDESQYLSFGFAPMEARDTTILKQDINFGGKSYHAGSEVVSAYRNWMLSADYVYKL LADSDWILDVGGGVSIVGQSIRLDNINGENLSEYDDLFFTPAASIEAGYHFTESLSTTIGYRISGLSDFDQESLWLSINY QLNDRWATSLFAGQINQTTDTDDYYNDAQFDYGGFAVTYAF >Mature_440_residues PTTKPVVCLSITTALALSTLSPPLYAQSEIFDGQSGTISDIGDVVQIALPAGALIGSLWIGDTEGAWQLTKGVAATAAIT HTMKFGYERLRPDGSESNSFPSGHTSAAFSGAAYIHHRYGNTWGIPAYAAATFVGASRVWANRHYVDDVLAGGSIAVLSS LYFTDPYNNSDLVVVPSFGENHIGLAMSYTPGLNGPKDKRPNQNTEIWGEKKQTLLHSYSLLVGGFDTEKNQINEVGQDS FDLYDFSRESEPNTYAAAQLRWGLDESQYLSFGFAPMEARDTTILKQDINFGGKSYHAGSEVVSAYRNWMLSADYVYKLL ADSDWILDVGGGVSIVGQSIRLDNINGENLSEYDDLFFTPAASIEAGYHFTESLSTTIGYRISGLSDFDQESLWLSINYQ LNDRWATSLFAGQINQTTDTDDYYNDAQFDYGGFAVTYAF
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48190; Mature: 48059
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTKPVVCLSITTALALSTLSPPLYAQSEIFDGQSGTISDIGDVVQIALPAGALIGSLW CCCCCCEEEEEHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCHHHHEEEEE IGDTEGAWQLTKGVAATAAITHTMKFGYERLRPDGSESNSFPSGHTSAAFSGAAYIHHRY ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCEEEEEEEC GNTWGIPAYAAATFVGASRVWANRHYVDDVLAGGSIAVLSSLYFTDPYNNSDLVVVPSFG CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHEECCCCCCCEEEECCCC ENHIGLAMSYTPGLNGPKDKRPNQNTEIWGEKKQTLLHSYSLLVGGFDTEKNQINEVGQD CCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHCCCC SFDLYDFSRESEPNTYAAAQLRWGLDESQYLSFGFAPMEARDTTILKQDINFGGKSYHAG CCEEEECCCCCCCCCEEEEEEEECCCHHHHEEECCCCCCCCCCEEEEHHCCCCCCCCCCH SEVVSAYRNWMLSADYVYKLLADSDWILDVGGGVSIVGQSIRLDNINGENLSEYDDLFFT HHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCEEEECEEEEECCCCCCCCHHHHEEEC PAASIEAGYHFTESLSTTIGYRISGLSDFDQESLWLSINYQLNDRWATSLFAGQINQTTD CCCCCCCCCEEHHHHHHHHCEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHCCCCCCCC TDDYYNDAQFDYGGFAVTYAF CCCCCCCCCCCCCCEEEEEEC >Mature Secondary Structure PTTKPVVCLSITTALALSTLSPPLYAQSEIFDGQSGTISDIGDVVQIALPAGALIGSLW CCCCCEEEEEHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHCHHHHEEEEE IGDTEGAWQLTKGVAATAAITHTMKFGYERLRPDGSESNSFPSGHTSAAFSGAAYIHHRY ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCEEEEEEEC GNTWGIPAYAAATFVGASRVWANRHYVDDVLAGGSIAVLSSLYFTDPYNNSDLVVVPSFG CCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHEECCCCCCCEEEECCCC ENHIGLAMSYTPGLNGPKDKRPNQNTEIWGEKKQTLLHSYSLLVGGFDTEKNQINEVGQD CCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHCCCC SFDLYDFSRESEPNTYAAAQLRWGLDESQYLSFGFAPMEARDTTILKQDINFGGKSYHAG CCEEEECCCCCCCCCEEEEEEEECCCHHHHEEECCCCCCCCCCEEEEHHCCCCCCCCCCH SEVVSAYRNWMLSADYVYKLLADSDWILDVGGGVSIVGQSIRLDNINGENLSEYDDLFFT HHHHHHHHHHCCCHHHHHHHHCCCCEEEECCCCCEEEECEEEEECCCCCCCCHHHHEEEC PAASIEAGYHFTESLSTTIGYRISGLSDFDQESLWLSINYQLNDRWATSLFAGQINQTTD CCCCCCCCCEEHHHHHHHHCEEECCCCCCCCCCEEEEEEEEECCCHHHHHHHCCCCCCCC TDDYYNDAQFDYGGFAVTYAF CCCCCCCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA