Click here to switch to the map view.

The map label for this gene is pld [H]

Identifier: 167622814

GI number: 167622814

Start: 1090389

End: 1092155

Strand: Direct

Name: pld [H]

Synonym: Shal_0874

Alternate gene names: 167622814

Gene position: 1090389-1092155 (Clockwise)

Preceding gene: 167622812

Following gene: 167622815

Centisome position: 20.86

GC content: 50.82

Gene sequence:

>1767_bases
ATGAAACGACCTTTCACTCGAAGAGACTTTTTGACGATGTCGGCAAAAGGCGTAGGCGCGGCCGTCGTATCATATGGCCT
GATGGGCTGTAGCAGTGACGATGACGACAATGGCATTTATGCTGAATTCTTACATGGCTTAGCAAGTGGCGATCCTAGTC
ATGACGCGGTGATCCTTTGGACTCGTGTTACACCTAAGCGCGATGGTGATATCAAGGTGTCGTGGGAGGTATCTACCGAT
GCCGCATTCACCCAGTTAGTGAGTAATGGTGAAACCATGACCAGCAGCGAGCGAGACTATACGGTTAAGGTCGATGCCGT
TGGTCTTGAAGCTGGGATGCAGTATTTCTACCGCTTTAAAACAGGCGGTAAAACTTCTCATGCAGCGATGACCAAGACCT
TGCCGCAAGGCGCTATTGATAGTGCAAAATTCGCCGTGGTCTCCTGTGCGAATTTCCCTGCAGGATATTTTAATGTGTAT
GAGATGGCCTCCAGAATGGACGATCTCGATGCGGTGATCCACTTAGGTGACTATATCTATGAGTATGCTCGTGGCGGTTA
TGCCAGTGAGCGTGCCGCAGAGCTTGGGCGTGAGGTCCTGCCCGAAGGCGAACTGATAAGCCTGTCAGATTATCGCACCC
GTTATGGTCAGTATCGCAGCGATCTTAGTTTGCAGAAACTCCATGGTAAAACGCCGTTTATCACGGTATGGGATGATCAC
GAAGTGGCCAATGATAGTTGGCGTGATGGGGCGGAGAATCATAACGATGATGAAGGCGACTTCGATGCCCGTAAAGAGGC
GGCGCTGCAGGCTTATTTTGAGTGGCTACCGATTCGTCCATGGCGTGAGGGGAATCATGAAGAGATCTATCGCTCATTCC
AGTTTGGTGACTTGGTCGACCTGCATATGCTCGATACCCGACTACTTGGCCGAGATAAGCCTCTGGATTACGCCGAGTAT
ATGGACGCGGCGACTGGCGGCTTAGATGGCGCTCGCTTTATGGCGGATGTGACCGACACTAACAGAACCATGCTCGGCCA
AACACAGCAAGCTTGGCTGCAAACGGCCTTGCTAACCTCCACTACAACTTGGCAGGTGCTGGGTCAGCAGGTATTGATGG
GGCAGATGATGTTGCCAGCGGCTATCGCCACCCAACAGTTGTCGATCCCTGAGTTTGGTCAGCTGGCAGCGTTAGCCCAA
TTTGCTGCTCGCAAAGCAGCCGGTGACCCGACGTTAACCGAAGATGAGCTTAAGTACCTGTCTTTCTATGGCCATAAATT
GACGCCTGAAACGATGGCTCTGCTGCAGCTGCCATCTATCCCTTATAACTTGGATGCATGGGATGGTTATGCCTACGAGC
GGGAAGTGATTTTGGCGACGGTCAAATCACAGGCGAAGAACCTAGTCGTGATTGCTGGAGATACCCATAACGCTTGGGCG
AATGAGCTCAAAGATGCGGCGGGTGACGCCGTTGGAGTCGAGTTTGCAACCAGCTCGGTATCATCTCCCGGTCTTGAGTA
TTATCTCGGTATCGATGCTAAAGATATTCCTGCAACAGAGGCGGCAATTATCGAACTGGTCGATAATCTTGCCTACGCCA
ACTTGATGAACCGCGGCTTGATGATATTGACCTTTACCCATCAAGAGGTGCGCAGCGACTGGCGCTATGTCGACACCATC
TATACTCGTGACTTTAATGAAGATACTGAACGTAATTTCTCTATGGTGACTAAAGTGGGTAACCATACGCTTGAAGTGGT
TAGTTAA

Upstream 100 bases:

>100_bases
TTATCTTTTTCGTGTCATGGTGGTGCTTTAGTATTCAGGCTGATTAGACCTCGTACCACATAAGTAAAACTAGAACGCTA
ATATTAAAGGAATAATAACA

Downstream 100 bases:

>100_bases
GTCTTAGTCGCCAAGGGTGTGACTCTGGTTCACTGGTTTTAAATAAGGGCTGCCGTAGGACGGCCCTTATTTTTTTAGTG
GTAGCGGCATAAGTTTTTCG

Product: alkaline phosphatase

Products: NA

Alternate protein names: PLD [H]

Number of amino acids: Translated: 588; Mature: 588

Protein sequence:

>588_residues
MKRPFTRRDFLTMSAKGVGAAVVSYGLMGCSSDDDDNGIYAEFLHGLASGDPSHDAVILWTRVTPKRDGDIKVSWEVSTD
AAFTQLVSNGETMTSSERDYTVKVDAVGLEAGMQYFYRFKTGGKTSHAAMTKTLPQGAIDSAKFAVVSCANFPAGYFNVY
EMASRMDDLDAVIHLGDYIYEYARGGYASERAAELGREVLPEGELISLSDYRTRYGQYRSDLSLQKLHGKTPFITVWDDH
EVANDSWRDGAENHNDDEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFQFGDLVDLHMLDTRLLGRDKPLDYAEY
MDAATGGLDGARFMADVTDTNRTMLGQTQQAWLQTALLTSTTTWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALAQ
FAARKAAGDPTLTEDELKYLSFYGHKLTPETMALLQLPSIPYNLDAWDGYAYEREVILATVKSQAKNLVVIAGDTHNAWA
NELKDAAGDAVGVEFATSSVSSPGLEYYLGIDAKDIPATEAAIIELVDNLAYANLMNRGLMILTFTHQEVRSDWRYVDTI
YTRDFNEDTERNFSMVTKVGNHTLEVVS

Sequences:

>Translated_588_residues
MKRPFTRRDFLTMSAKGVGAAVVSYGLMGCSSDDDDNGIYAEFLHGLASGDPSHDAVILWTRVTPKRDGDIKVSWEVSTD
AAFTQLVSNGETMTSSERDYTVKVDAVGLEAGMQYFYRFKTGGKTSHAAMTKTLPQGAIDSAKFAVVSCANFPAGYFNVY
EMASRMDDLDAVIHLGDYIYEYARGGYASERAAELGREVLPEGELISLSDYRTRYGQYRSDLSLQKLHGKTPFITVWDDH
EVANDSWRDGAENHNDDEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFQFGDLVDLHMLDTRLLGRDKPLDYAEY
MDAATGGLDGARFMADVTDTNRTMLGQTQQAWLQTALLTSTTTWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALAQ
FAARKAAGDPTLTEDELKYLSFYGHKLTPETMALLQLPSIPYNLDAWDGYAYEREVILATVKSQAKNLVVIAGDTHNAWA
NELKDAAGDAVGVEFATSSVSSPGLEYYLGIDAKDIPATEAAIIELVDNLAYANLMNRGLMILTFTHQEVRSDWRYVDTI
YTRDFNEDTERNFSMVTKVGNHTLEVVS
>Mature_588_residues
MKRPFTRRDFLTMSAKGVGAAVVSYGLMGCSSDDDDNGIYAEFLHGLASGDPSHDAVILWTRVTPKRDGDIKVSWEVSTD
AAFTQLVSNGETMTSSERDYTVKVDAVGLEAGMQYFYRFKTGGKTSHAAMTKTLPQGAIDSAKFAVVSCANFPAGYFNVY
EMASRMDDLDAVIHLGDYIYEYARGGYASERAAELGREVLPEGELISLSDYRTRYGQYRSDLSLQKLHGKTPFITVWDDH
EVANDSWRDGAENHNDDEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFQFGDLVDLHMLDTRLLGRDKPLDYAEY
MDAATGGLDGARFMADVTDTNRTMLGQTQQAWLQTALLTSTTTWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALAQ
FAARKAAGDPTLTEDELKYLSFYGHKLTPETMALLQLPSIPYNLDAWDGYAYEREVILATVKSQAKNLVVIAGDTHNAWA
NELKDAAGDAVGVEFATSSVSSPGLEYYLGIDAKDIPATEAAIIELVDNLAYANLMNRGLMILTFTHQEVRSDWRYVDTI
YTRDFNEDTERNFSMVTKVGNHTLEVVS

Specific function: Catalyzes the hydrolysis of the ester bond between the phosphatidic acid and alcohol moieties of phospholipids. Can catalyze a transphosphatidylation reaction in the presence of high concentrations of primary alcohols. Has also phosphatase activity toward

COG id: COG3540

COG function: function code P; Phosphodiesterase/alkaline phosphatase D

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhoD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018946
- InterPro:   IPR006311 [H]

Pfam domain/function: PF09423 PhoD [H]

EC number: =3.1.4.4 [H]

Molecular weight: Translated: 65407; Mature: 65407

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRPFTRRDFLTMSAKGVGAAVVSYGLMGCSSDDDDNGIYAEFLHGLASGDPSHDAVILW
CCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEE
TRVTPKRDGDIKVSWEVSTDAAFTQLVSNGETMTSSERDYTVKVDAVGLEAGMQYFYRFK
EECCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCEEEEEEEECHHHHHHHHEEEC
TGGKTSHAAMTKTLPQGAIDSAKFAVVSCANFPAGYFNVYEMASRMDDLDAVIHLGDYIY
CCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EYARGGYASERAAELGREVLPEGELISLSDYRTRYGQYRSDLSLQKLHGKTPFITVWDDH
HHHCCCCCHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCC
EVANDSWRDGAENHNDDEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFQFGDLVD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEH
LHMLDTRLLGRDKPLDYAEYMDAATGGLDGARFMADVTDTNRTMLGQTQQAWLQTALLTS
HHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHEEECCCCCCHHHCCHHHHHHHHHHHHC
TTTWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALAQFAARKAAGDPTLTEDELKYL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
SFYGHKLTPETMALLQLPSIPYNLDAWDGYAYEREVILATVKSQAKNLVVIAGDTHNAWA
HHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHEEEEHHCCCCEEEEECCCCCHHH
NELKDAAGDAVGVEFATSSVSSPGLEYYLGIDAKDIPATEAAIIELVDNLAYANLMNRGL
HHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCE
MILTFTHQEVRSDWRYVDTIYTRDFNEDTERNFSMVTKVGNHTLEVVS
EEEEECHHHHHCCHHEEHHHEECCCCCCHHHHHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MKRPFTRRDFLTMSAKGVGAAVVSYGLMGCSSDDDDNGIYAEFLHGLASGDPSHDAVILW
CCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEE
TRVTPKRDGDIKVSWEVSTDAAFTQLVSNGETMTSSERDYTVKVDAVGLEAGMQYFYRFK
EECCCCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCEEEEEEEECHHHHHHHHEEEC
TGGKTSHAAMTKTLPQGAIDSAKFAVVSCANFPAGYFNVYEMASRMDDLDAVIHLGDYIY
CCCCCCHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EYARGGYASERAAELGREVLPEGELISLSDYRTRYGQYRSDLSLQKLHGKTPFITVWDDH
HHHCCCCCHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCC
EVANDSWRDGAENHNDDEGDFDARKEAALQAYFEWLPIRPWREGNHEEIYRSFQFGDLVD
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCEEH
LHMLDTRLLGRDKPLDYAEYMDAATGGLDGARFMADVTDTNRTMLGQTQQAWLQTALLTS
HHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHEEECCCCCCHHHCCHHHHHHHHHHHHC
TTTWQVLGQQVLMGQMMLPAAIATQQLSIPEFGQLAALAQFAARKAAGDPTLTEDELKYL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
SFYGHKLTPETMALLQLPSIPYNLDAWDGYAYEREVILATVKSQAKNLVVIAGDTHNAWA
HHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHEEEEHHCCCCEEEEECCCCCHHH
NELKDAAGDAVGVEFATSSVSSPGLEYYLGIDAKDIPATEAAIIELVDNLAYANLMNRGL
HHHHHHCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCE
MILTFTHQEVRSDWRYVDTIYTRDFNEDTERNFSMVTKVGNHTLEVVS
EEEEECHHHHHCCHHEEHHHEECCCCCCHHHHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12441393 [H]