| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622769
Identifier: 167622769
GI number: 167622769
Start: 1032352
End: 1032507
Strand: Direct
Name: 167622769
Synonym: Shal_0829
Alternate gene names: NA
Gene position: 1032352-1032507 (Clockwise)
Preceding gene: 167622767
Following gene: 167622771
Centisome position: 19.75
GC content: 47.44
Gene sequence:
>156_bases ATGCTGCTATGTGCCGTTGGTGTCCTTTTTTTGTCCAATATGTCGCAACAAGTAGAAGGTATGGTACTTATTGCCAGTCT AGCGGGTCTGGGGATGGTGATGATGTCGCCGTTTCCTATTGCGCTCTTCTTCGAGTGGGCACGCAAGCAAAATTAA
Upstream 100 bases:
>100_bases ATTGTGAATATATTAGTCTAAAATCAATAGAAAAAGGCGGTTTGCAGTGCAAAAAAATGTAATTAAAACACTAAAAATAT TGCATTGGATAGGTTTAAGC
Downstream 100 bases:
>100_bases AAGAAGGTTCTAGGAAAATCAGGTACTAGGATAAAGAAGGGCAAAAGTGTTATCAATTGGATTGGATAGATGTGGTTTTG CTTTTCTGCTTGTCTCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 51; Mature: 51
Protein sequence:
>51_residues MLLCAVGVLFLSNMSQQVEGMVLIASLAGLGMVMMSPFPIALFFEWARKQN
Sequences:
>Translated_51_residues MLLCAVGVLFLSNMSQQVEGMVLIASLAGLGMVMMSPFPIALFFEWARKQN >Mature_51_residues MLLCAVGVLFLSNMSQQVEGMVLIASLAGLGMVMMSPFPIALFFEWARKQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5592; Mature: 5592
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 11.8 %Met (Translated Protein) 13.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 11.8 %Met (Mature Protein) 13.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLCAVGVLFLSNMSQQVEGMVLIASLAGLGMVMMSPFPIALFFEWARKQN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MLLCAVGVLFLSNMSQQVEGMVLIASLAGLGMVMMSPFPIALFFEWARKQN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA