Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622737

Identifier: 167622737

GI number: 167622737

Start: 992184

End: 992708

Strand: Reverse

Name: 167622737

Synonym: Shal_0797

Alternate gene names: NA

Gene position: 992708-992184 (Counterclockwise)

Preceding gene: 167622742

Following gene: 167622734

Centisome position: 18.99

GC content: 46.86

Gene sequence:

>525_bases
ATGAAAAAGACAATCTCTGCAGTCGCGCTAACTGCAATCCTAAGCACTCAACTTACCGGTTGTATGGGCCAAATGGGCCT
AAGCGCCATGGTAACTAAGGCTAACCTTAGCGCTGTAGACAACCGTTACGGTCGTGCAGGCCTGTTCATCTTAATGAGCC
CAATTTATGGCTTTGCTGCTACTGGCGATCTATTTATTATTAACAGCATCGAATTCTGGACTGGCACCAACCCTGTAACA
GGCCGTTCACCTGCGGTTGTCGACATGCCAGTTGAAGCGATTTTCAAGGTTAACCAACACATCGATGGCGACCTAACAAC
CGCCCCGCTAAAGAACGTTAAGTTAACTAGCGCTTCAATGGTTGCAACTGACGAAAATACCTTGGCAATGACACTCATTT
ATGAAGATGGTAGCCAGCAGGTTATGTCTGGCGTTAAGCAAGATGAGCATGTTGATTTCTATCTAGATAACACATTCATT
GCGCGCGTGAGCACTGATGAGCTTGCCGCGTACCAGCAAGGTTAA

Upstream 100 bases:

>100_bases
ACAAAACATTTTCCCAACCCAGAGTTGCGAGCCTTGTCACATCTCAATTTTTACCGATACATACAATCAGCGCCATTCTC
AATTCAGTAAGATTAAACCA

Downstream 100 bases:

>100_bases
TACCAATAGGTATAATGAATAACGCTTACTCCGTGATCTGAAAAGGGCCAGTCATACTGGCCCTTTTTTTATCCGTGTTG
ATTCAAAACGATTAACGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKKTISAVALTAILSTQLTGCMGQMGLSAMVTKANLSAVDNRYGRAGLFILMSPIYGFAATGDLFIINSIEFWTGTNPVT
GRSPAVVDMPVEAIFKVNQHIDGDLTTAPLKNVKLTSASMVATDENTLAMTLIYEDGSQQVMSGVKQDEHVDFYLDNTFI
ARVSTDELAAYQQG

Sequences:

>Translated_174_residues
MKKTISAVALTAILSTQLTGCMGQMGLSAMVTKANLSAVDNRYGRAGLFILMSPIYGFAATGDLFIINSIEFWTGTNPVT
GRSPAVVDMPVEAIFKVNQHIDGDLTTAPLKNVKLTSASMVATDENTLAMTLIYEDGSQQVMSGVKQDEHVDFYLDNTFI
ARVSTDELAAYQQG
>Mature_174_residues
MKKTISAVALTAILSTQLTGCMGQMGLSAMVTKANLSAVDNRYGRAGLFILMSPIYGFAATGDLFIINSIEFWTGTNPVT
GRSPAVVDMPVEAIFKVNQHIDGDLTTAPLKNVKLTSASMVATDENTLAMTLIYEDGSQQVMSGVKQDEHVDFYLDNTFI
ARVSTDELAAYQQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18710; Mature: 18710

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTISAVALTAILSTQLTGCMGQMGLSAMVTKANLSAVDNRYGRAGLFILMSPIYGFAA
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHCCCCCCEEEEEECCHHCEEC
TGDLFIINSIEFWTGTNPVTGRSPAVVDMPVEAIFKVNQHIDGDLTTAPLKNVKLTSASM
CCCEEEEEEEEEECCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCEECCCCCEEECCCEE
VATDENTLAMTLIYEDGSQQVMSGVKQDEHVDFYLDNTFIARVSTDELAAYQQG
EEECCCEEEEEEEEECCCHHHHHCCCCCCCEEEEECCEEEEEECHHHHHHCCCC
>Mature Secondary Structure
MKKTISAVALTAILSTQLTGCMGQMGLSAMVTKANLSAVDNRYGRAGLFILMSPIYGFAA
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHHHHHHCCCCCCEEEEEECCHHCEEC
TGDLFIINSIEFWTGTNPVTGRSPAVVDMPVEAIFKVNQHIDGDLTTAPLKNVKLTSASM
CCCEEEEEEEEEECCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCEECCCCCEEECCCEE
VATDENTLAMTLIYEDGSQQVMSGVKQDEHVDFYLDNTFIARVSTDELAAYQQG
EEECCCEEEEEEEEECCCHHHHHCCCCCCCEEEEECCEEEEEECHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA