Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622707

Identifier: 167622707

GI number: 167622707

Start: 951636

End: 952340

Strand: Direct

Name: 167622707

Synonym: Shal_0767

Alternate gene names: NA

Gene position: 951636-952340 (Clockwise)

Preceding gene: 167622702

Following gene: 167622708

Centisome position: 18.21

GC content: 45.25

Gene sequence:

>705_bases
ATGTTTTTAAGTTCTTATTTTCAAAAAGAAAATCAATCTGTATCCATCACTCCTCAGCAGGCGAGTGATTTTGCCAAAAT
CGTTGCGCAAGATTTCAACCCGATCCACGATGTAGCCGCTAAGCGTTTTTGTGTGCCAGGAGATCTGCTTTTTGCCTTAG
TATTGAATGAATATGGCTTAAGCCAGAAAATGACCTTTAACTTTGCCGGTATGGTGGGTGATGGTGTCAAACTGCAGTTT
CCAGATGCGGTAAAAGAAGACTTTGATATTCGAGATGACAAAGATAAGTGCTATCTCAAAGTACATAGCAGTGGTGATGT
ACGTCATTGCGAGACCCAGATAGAGTCTTTTATTCGTAAATATGTGGCGTTCTCTGGGCTGAACTTCATGCACATTCTGG
TGCCGATGATGAAACAACATCAGATGATGATTAATCCAGCTCGCCCTTTGGTGATCTACGAGAGCATGTCGTTTGACTTA
ACCACGCTCGATTTTACCGAGGTGAGCCTGAAACTGGTTAAGCAAGAGCTTGAGATCGAAGGCAAGCGCGGTGATGTGAC
CCTAACCTTTGAGCTACTCAGCGGTGATGCCGTCGTGGGCACTGGTGTCAAAACGCTAGTGATGAGCGGACTGCGTCCAT
ATGAAGATGAGCCTGCGCAGCAGATGTTTGATGCCTATGAGGGGCGCAGAATCGCATTCTCTTAA

Upstream 100 bases:

>100_bases
AAAGACCACGATGGGGGAGTAAGTCATCGGGTGAGTCAAAATCAAATCTTGGTATACACTGTCGAGTCATTTTTATGGCT
AATTAGATGTTTGAGTGAAT

Downstream 100 bases:

>100_bases
ACACTGTCACTACAGTTAATTCTAGTTAAAGCCACTTAACGCAATTTTGCTTAAGTGGCTTTTTAGTTTTAAGTGCCAGA
TTTTGAGATTTGGATTTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MFLSSYFQKENQSVSITPQQASDFAKIVAQDFNPIHDVAAKRFCVPGDLLFALVLNEYGLSQKMTFNFAGMVGDGVKLQF
PDAVKEDFDIRDDKDKCYLKVHSSGDVRHCETQIESFIRKYVAFSGLNFMHILVPMMKQHQMMINPARPLVIYESMSFDL
TTLDFTEVSLKLVKQELEIEGKRGDVTLTFELLSGDAVVGTGVKTLVMSGLRPYEDEPAQQMFDAYEGRRIAFS

Sequences:

>Translated_234_residues
MFLSSYFQKENQSVSITPQQASDFAKIVAQDFNPIHDVAAKRFCVPGDLLFALVLNEYGLSQKMTFNFAGMVGDGVKLQF
PDAVKEDFDIRDDKDKCYLKVHSSGDVRHCETQIESFIRKYVAFSGLNFMHILVPMMKQHQMMINPARPLVIYESMSFDL
TTLDFTEVSLKLVKQELEIEGKRGDVTLTFELLSGDAVVGTGVKTLVMSGLRPYEDEPAQQMFDAYEGRRIAFS
>Mature_234_residues
MFLSSYFQKENQSVSITPQQASDFAKIVAQDFNPIHDVAAKRFCVPGDLLFALVLNEYGLSQKMTFNFAGMVGDGVKLQF
PDAVKEDFDIRDDKDKCYLKVHSSGDVRHCETQIESFIRKYVAFSGLNFMHILVPMMKQHQMMINPARPLVIYESMSFDL
TTLDFTEVSLKLVKQELEIEGKRGDVTLTFELLSGDAVVGTGVKTLVMSGLRPYEDEPAQQMFDAYEGRRIAFS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26482; Mature: 26482

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLSSYFQKENQSVSITPQQASDFAKIVAQDFNPIHDVAAKRFCVPGDLLFALVLNEYGL
CCCCHHHHCCCCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
SQKMTFNFAGMVGDGVKLQFPDAVKEDFDIRDDKDKCYLKVHSSGDVRHCETQIESFIRK
CCEEEEEECCCCCCCEEEECCHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
YVAFSGLNFMHILVPMMKQHQMMINPARPLVIYESMSFDLTTLDFTEVSLKLVKQELEIE
HHHHCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHCC
GKRGDVTLTFELLSGDAVVGTGVKTLVMSGLRPYEDEPAQQMFDAYEGRRIAFS
CCCCCEEEEEEEECCCEEECCCHHHHHHHCCCCCCCCHHHHHHHHHCCCEECCC
>Mature Secondary Structure
MFLSSYFQKENQSVSITPQQASDFAKIVAQDFNPIHDVAAKRFCVPGDLLFALVLNEYGL
CCCCHHHHCCCCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCC
SQKMTFNFAGMVGDGVKLQFPDAVKEDFDIRDDKDKCYLKVHSSGDVRHCETQIESFIRK
CCEEEEEECCCCCCCEEEECCHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHH
YVAFSGLNFMHILVPMMKQHQMMINPARPLVIYESMSFDLTTLDFTEVSLKLVKQELEIE
HHHHCCCCHHHHHHHHHHHHHEEECCCCCEEEEECCCCEEEEEHHHHHHHHHHHHHHHCC
GKRGDVTLTFELLSGDAVVGTGVKTLVMSGLRPYEDEPAQQMFDAYEGRRIAFS
CCCCCEEEEEEEECCCEEECCCHHHHHHHCCCCCCCCHHHHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA