Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622672

Identifier: 167622672

GI number: 167622672

Start: 909643

End: 911799

Strand: Direct

Name: 167622672

Synonym: Shal_0732

Alternate gene names: NA

Gene position: 909643-911799 (Clockwise)

Preceding gene: 167622671

Following gene: 167622676

Centisome position: 17.4

GC content: 48.86

Gene sequence:

>2157_bases
ATGAAAAAATGGCTTTTGACAGCGGCTATCGCAACCTCTTTTGGTGCCGTAGCTGACGAAGGTATGTGGCAGCCTCATCA
ACTTCCTGCCATGGCAGACGAACTGAAAGCGAAGGGATTAGAAATTGACGTTAACTCAATTTCAAAACTGACCGAATTTC
CAATGAACGCCGTGATCAGCCTTGGCGGCTGTACGGCATCATTTGTATCACCCAAAGGGCTAGTGGTAACTAACCATCAC
TGCGCTTACGGCTCAATCCAGTACAACTCAACACCAGAAAACAATCTGCTTCGTGACGGTTTTCTCGCTAAGACATTTGC
CGATGAGCTGCCGGCAACCCCAGGCTCGCGTGTCTACGTGACAGAAAGCGTTGTCGATGTGACCGACAAGGTAAAAGATG
GCCTTGAAAACAAAATCGGTAATGCGTTTTACAAAGGCGTAGAGCAAAAAGAGAAAGGCTTAGTGGCCGAATGTGAGAAA
GAGGACGGTTACCGCTGTAAGGTATACAGCTTCCACGGCGGCCTCGAGTACTACCTAGTTAAGCAGTTAGAAATTCGCGA
TGTGCGCCTAGTATATAACCCAGCGGCAAGCGTAGGTAAGTACGGCGGCGATGTCGATAACTGGATGTGGCCACGTCACA
CAGGCGACTACTCATTCTACCGCGCCTATGTATCGAAAGATGGCAAGCCTGCAGATTTCAGCAAAGACAACGTGCCATTT
GAGCCAAAGAGCTTCTTGAAAGTCTCGGCTAAAGGCGTCAGCGAAGGTGATTTCGTGATGGTCGCAGGCTATCCCGGCCG
TACCAACCGTTACCGCACCGCTTACGAAGTGGAAAACCAGTTTGAGTGGTCGTATCCAGAAGGTAAAGTCTTACGTGAGC
GCCTAATCGAGATCATCAAAGAAACCGCGCCAGAGGGCAGCGATGAGCGCATCAAGTATGAAAGCTCAATTGCAGGCCTT
GCTAACTATGCTAAAAACTTCACCTCGATGATCGAGTTTTACGGCAAATCAACCATGCTTGATGACCGTAAGGCGCTCGA
GCAAAAACTGGCTAACTGGATTAATGCTGACAGCAAGCGTAAGCAGCAATACGGTAAAGTGCTCGCAGAGCTGGATAAGT
TAATCGCCAAGAGCCAGCAAGACCAAGAGCGTGATCTACTACTAGGCTACATGGGTTACAGCACCATGATGAGCACGGCA
AATCGCTTATATCGTCTCGCCAATGAAAAAGCCCTGCCAGATATGGAGCGTGAGCCAGGTTACCAAGACCGTGATATGAC
TCGCTTTACCTCGGGCATGGAGCGTATCGAGCGCCGTTATGCGGCCAGTGTTGATAAAGCCATGCTAGCGGATCTCATTA
CTCGCTACGCAGCGCTACCGAAAGATCAGCGCCTACCCGCGTTTGATAAAGCCTTTGGGATCACCGATAACTTCGATGCG
GCTAAGCTCAACAAGACCCTTGATAAGATGTACGCCAACACATCGCTTTCTGATAAAGAAGTGCGCCTAGCGTGGATGGA
GAAGTCTGTAGTTGAGTTCAACAACTCAAAAGACCCGTTCATTCAGTACGCGGTAGCGACTTATGACGAGCGCATGAAGC
GTGAAAAAGAGAAAAAGCAGTTAGCGGGTGAGCTAATGAAGGTGCGTCCTATGTATATGGACGCCATCATCGCCTATAAC
CGCGAGCTAGGTAAGCCAGTTTACGCCGATGCCAACTCAAGCCTACGTGTGACCGTGGGTCATGTGAAAGGTTACTCACC
TGAAGATGGCCTTTACGCAGAGCCGTTTACTCGTTTAGAGGGTATTTTAGCGAAAGACACGGGTGTTGAGCCGTTTAACG
CACCGGCTAAAGAGCTAGAGCTTATCGCGAACAAGCAGTACGGTGATTACTATGTAAAGTCTCTGGACTCAGTGCCAGTT
AACTTCCTATCGACTCTCGATACCACTGGTGGTAACTCTGGTTCACCCACTTTGAATGGTCGCGCCGAGTTGGTTGGCCT
GCTGTTTGACGGTGTGTACGAGAGCATTATCGGTGACTGGGGTTACGATACTGAGACTAACCGTTCTATCCAAGTGGATA
GCCGTTATATGCTTTGGGTAATGAAGTACTTAGATAATGCCGATAACCTATTAGAAGAGATGGAAATTGTTAATTAA

Upstream 100 bases:

>100_bases
CTGGCTTATCCAAGTGCTATAAATTGAATATCGAGAGACAAGCAATCAACAAAAATTTTAAAAATAATATAAATAAATAA
ATAAGAAATGGACTTATAAA

Downstream 100 bases:

>100_bases
CCTTATAGACCAAGGTTAGATAGGTCTTTTGGATGCAAAAGCCGAAACATGAAAGTGTTTCGGCTTTTTTGATCTTTGGT
GGTTTGTTTGGTGGTGGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 718; Mature: 718

Protein sequence:

>718_residues
MKKWLLTAAIATSFGAVADEGMWQPHQLPAMADELKAKGLEIDVNSISKLTEFPMNAVISLGGCTASFVSPKGLVVTNHH
CAYGSIQYNSTPENNLLRDGFLAKTFADELPATPGSRVYVTESVVDVTDKVKDGLENKIGNAFYKGVEQKEKGLVAECEK
EDGYRCKVYSFHGGLEYYLVKQLEIRDVRLVYNPAASVGKYGGDVDNWMWPRHTGDYSFYRAYVSKDGKPADFSKDNVPF
EPKSFLKVSAKGVSEGDFVMVAGYPGRTNRYRTAYEVENQFEWSYPEGKVLRERLIEIIKETAPEGSDERIKYESSIAGL
ANYAKNFTSMIEFYGKSTMLDDRKALEQKLANWINADSKRKQQYGKVLAELDKLIAKSQQDQERDLLLGYMGYSTMMSTA
NRLYRLANEKALPDMEREPGYQDRDMTRFTSGMERIERRYAASVDKAMLADLITRYAALPKDQRLPAFDKAFGITDNFDA
AKLNKTLDKMYANTSLSDKEVRLAWMEKSVVEFNNSKDPFIQYAVATYDERMKREKEKKQLAGELMKVRPMYMDAIIAYN
RELGKPVYADANSSLRVTVGHVKGYSPEDGLYAEPFTRLEGILAKDTGVEPFNAPAKELELIANKQYGDYYVKSLDSVPV
NFLSTLDTTGGNSGSPTLNGRAELVGLLFDGVYESIIGDWGYDTETNRSIQVDSRYMLWVMKYLDNADNLLEEMEIVN

Sequences:

>Translated_718_residues
MKKWLLTAAIATSFGAVADEGMWQPHQLPAMADELKAKGLEIDVNSISKLTEFPMNAVISLGGCTASFVSPKGLVVTNHH
CAYGSIQYNSTPENNLLRDGFLAKTFADELPATPGSRVYVTESVVDVTDKVKDGLENKIGNAFYKGVEQKEKGLVAECEK
EDGYRCKVYSFHGGLEYYLVKQLEIRDVRLVYNPAASVGKYGGDVDNWMWPRHTGDYSFYRAYVSKDGKPADFSKDNVPF
EPKSFLKVSAKGVSEGDFVMVAGYPGRTNRYRTAYEVENQFEWSYPEGKVLRERLIEIIKETAPEGSDERIKYESSIAGL
ANYAKNFTSMIEFYGKSTMLDDRKALEQKLANWINADSKRKQQYGKVLAELDKLIAKSQQDQERDLLLGYMGYSTMMSTA
NRLYRLANEKALPDMEREPGYQDRDMTRFTSGMERIERRYAASVDKAMLADLITRYAALPKDQRLPAFDKAFGITDNFDA
AKLNKTLDKMYANTSLSDKEVRLAWMEKSVVEFNNSKDPFIQYAVATYDERMKREKEKKQLAGELMKVRPMYMDAIIAYN
RELGKPVYADANSSLRVTVGHVKGYSPEDGLYAEPFTRLEGILAKDTGVEPFNAPAKELELIANKQYGDYYVKSLDSVPV
NFLSTLDTTGGNSGSPTLNGRAELVGLLFDGVYESIIGDWGYDTETNRSIQVDSRYMLWVMKYLDNADNLLEEMEIVN
>Mature_718_residues
MKKWLLTAAIATSFGAVADEGMWQPHQLPAMADELKAKGLEIDVNSISKLTEFPMNAVISLGGCTASFVSPKGLVVTNHH
CAYGSIQYNSTPENNLLRDGFLAKTFADELPATPGSRVYVTESVVDVTDKVKDGLENKIGNAFYKGVEQKEKGLVAECEK
EDGYRCKVYSFHGGLEYYLVKQLEIRDVRLVYNPAASVGKYGGDVDNWMWPRHTGDYSFYRAYVSKDGKPADFSKDNVPF
EPKSFLKVSAKGVSEGDFVMVAGYPGRTNRYRTAYEVENQFEWSYPEGKVLRERLIEIIKETAPEGSDERIKYESSIAGL
ANYAKNFTSMIEFYGKSTMLDDRKALEQKLANWINADSKRKQQYGKVLAELDKLIAKSQQDQERDLLLGYMGYSTMMSTA
NRLYRLANEKALPDMEREPGYQDRDMTRFTSGMERIERRYAASVDKAMLADLITRYAALPKDQRLPAFDKAFGITDNFDA
AKLNKTLDKMYANTSLSDKEVRLAWMEKSVVEFNNSKDPFIQYAVATYDERMKREKEKKQLAGELMKVRPMYMDAIIAYN
RELGKPVYADANSSLRVTVGHVKGYSPEDGLYAEPFTRLEGILAKDTGVEPFNAPAKELELIANKQYGDYYVKSLDSVPV
NFLSTLDTTGGNSGSPTLNGRAELVGLLFDGVYESIIGDWGYDTETNRSIQVDSRYMLWVMKYLDNADNLLEEMEIVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80975; Mature: 80975

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWLLTAAIATSFGAVADEGMWQPHQLPAMADELKAKGLEIDVNSISKLTEFPMNAVIS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHHCCHHHHEE
LGGCTASFVSPKGLVVTNHHCAYGSIQYNSTPENNLLRDGFLAKTFADELPATPGSRVYV
CCCCEECCCCCCCEEEECCCCEECEEEECCCCCCCCHHCCHHHHHHHHHCCCCCCCEEEE
TESVVDVTDKVKDGLENKIGNAFYKGVEQKEKGLVAECEKEDGYRCKVYSFHGGLEYYLV
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCCCEEEEE
KQLEIRDVRLVYNPAASVGKYGGDVDNWMWPRHTGDYSFYRAYVSKDGKPADFSKDNVPF
EEEEEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
EPKSFLKVSAKGVSEGDFVMVAGYPGRTNRYRTAYEVENQFEWSYPEGKVLRERLIEIIK
CCHHHHEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHH
ETAPEGSDERIKYESSIAGLANYAKNFTSMIEFYGKSTMLDDRKALEQKLANWINADSKR
HHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHH
KQQYGKVLAELDKLIAKSQQDQERDLLLGYMGYSTMMSTANRLYRLANEKALPDMEREPG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
YQDRDMTRFTSGMERIERRYAASVDKAMLADLITRYAALPKDQRLPAFDKAFGITDNFDA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCH
AKLNKTLDKMYANTSLSDKEVRLAWMEKSVVEFNNSKDPFIQYAVATYDERMKREKEKKQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAGELMKVRPMYMDAIIAYNRELGKPVYADANSSLRVTVGHVKGYSPEDGLYAEPFTRLE
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHH
GILAKDTGVEPFNAPAKELELIANKQYGDYYVKSLDSVPVNFLSTLDTTGGNSGSPTLNG
HHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCC
RAELVGLLFDGVYESIIGDWGYDTETNRSIQVDSRYMLWVMKYLDNADNLLEEMEIVN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKWLLTAAIATSFGAVADEGMWQPHQLPAMADELKAKGLEIDVNSISKLTEFPMNAVIS
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEHHHHHHHHHCCHHHHEE
LGGCTASFVSPKGLVVTNHHCAYGSIQYNSTPENNLLRDGFLAKTFADELPATPGSRVYV
CCCCEECCCCCCCEEEECCCCEECEEEECCCCCCCCHHCCHHHHHHHHHCCCCCCCEEEE
TESVVDVTDKVKDGLENKIGNAFYKGVEQKEKGLVAECEKEDGYRCKVYSFHGGLEYYLV
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEEECCCCEEEEE
KQLEIRDVRLVYNPAASVGKYGGDVDNWMWPRHTGDYSFYRAYVSKDGKPADFSKDNVPF
EEEEEEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCC
EPKSFLKVSAKGVSEGDFVMVAGYPGRTNRYRTAYEVENQFEWSYPEGKVLRERLIEIIK
CCHHHHEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHH
ETAPEGSDERIKYESSIAGLANYAKNFTSMIEFYGKSTMLDDRKALEQKLANWINADSKR
HHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHH
KQQYGKVLAELDKLIAKSQQDQERDLLLGYMGYSTMMSTANRLYRLANEKALPDMEREPG
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
YQDRDMTRFTSGMERIERRYAASVDKAMLADLITRYAALPKDQRLPAFDKAFGITDNFDA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCH
AKLNKTLDKMYANTSLSDKEVRLAWMEKSVVEFNNSKDPFIQYAVATYDERMKREKEKKQ
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LAGELMKVRPMYMDAIIAYNRELGKPVYADANSSLRVTVGHVKGYSPEDGLYAEPFTRLE
HHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHH
GILAKDTGVEPFNAPAKELELIANKQYGDYYVKSLDSVPVNFLSTLDTTGGNSGSPTLNG
HHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCC
RAELVGLLFDGVYESIIGDWGYDTETNRSIQVDSRYMLWVMKYLDNADNLLEEMEIVN
HHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA