| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is tyrP [H]
Identifier: 167622671
GI number: 167622671
Start: 908138
End: 909337
Strand: Direct
Name: tyrP [H]
Synonym: Shal_0731
Alternate gene names: 167622671
Gene position: 908138-909337 (Clockwise)
Preceding gene: 167622669
Following gene: 167622672
Centisome position: 17.37
GC content: 48.92
Gene sequence:
>1200_bases GTGAACTCAAAAATACTTGGCTCTATCGCCATTGTTGCCGGAACGGCAATTGGTGGTGGCATGTTGGCATTACCGCTGGC TACTGCTTCATTAGGTACCATTCCCGCGCTGCTGTTACTTATCACGATTTGGGGTGTATCTATCTATACCTCCCTATTAA TGCTTGAAATTAACCTACGTGTTGGTGTTGGCTTAAACCTGCATAGCATCACGGGTAAAACCTTAGGTAAGCTAGGTCAG CTTATTCAAGGCGGCTCATTCTTAAGCCTGTTGTTTGCGCTTACCATGGTCTATCTGATGGGCGGCTCTTCGCTGCTTGA GTCTAAAATGGAACTGGTTGGCATGAAGATGGACAATCAGTTTGCAGTGCTGCTGTTCACCTTGATTTTCGGTGGTTTTA TTGCCGTTGGTGTCGGCTGGATTGATAAAGTTTCACGTGTGCTGTTTACCACTATGATCGCGTTGCTGGTCGTTGTCGTC GCGTACTTGATGCCAGAAGTCGACATGGGCATGATGATGACCAACACTACCGATAGCTTAGTCGACGGGCGTGATCTGAC TAACCTATGGCTGGCGGCTATTCCAATCGTGTTTACCTCTTTTGGTTTCCATGTCTGTATCGCCACTATCGTGCGTTACT TAGACGGCGATGCCATGTCGCTGCGTAAGGTATTGATTATCGGTTCAACCATTCCGCTAGTGTGCTATATCCTGTGGCTA GTGGTGACCTTGGGTACGTTAGGCGGCAAAACGGTTCATGAGTTTGATGGCTCACTGCCACTGCTAGTAACGGCGCTGCA AGGCGTTGCCGAGTCTTCAATCCTGAAGCACTTTATCGATCTGTTCGCCAACCTTGCGCTGGTGACCTCATTCCTTGGCG TAACCATGAGTCTGTTTGATTATGTTGCCGAGCTGACTCGCGCGAAAGAGAGCTGGAAGGGACGTGCACAGACTTGGTTA CTGACTTTTATACCACCGCTATTGTGTGCCCTTTACTATCCAGATGGCTTCTTCAAGGTGCTGGGCTTTGCGGCAATTCC ACTGGTAGTGATGATTATTTTCCTACCGATAGCGATGGCATTGGGCCTACGTAAGCAAAACTTGGGTGGTTATCAGGTAT CTGGTGGCAACGCGGCGCTAGGCTTAGCGGCCGTTGCGGGTTTAACTATTATCTTGGCTCAGCTATGGGTCGCACTTTAA
Upstream 100 bases:
>100_bases GGCTGTTAATGATATTGTTAGCTTGCAAAATCCTCTCCCTCAAAGTCGTTCTAAATCTGACCTATCTAAATAAATAAATA AAATTTAACAGGACAATTTT
Downstream 100 bases:
>100_bases TCGTTGCACTTTAATAAATGACAGCATCAGTCTGTAACAACCTTAGCGACTCTTACCTATACAAAGTTATAGCTTTGTAA GAGATTAATTCAGAAGCTGT
Product: aromatic amino acid permease
Products: Proton [Cytoplasm]; L-tyrosine [Cytoplasm] [C]
Alternate protein names: Tyrosine permease [H]
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MNSKILGSIAIVAGTAIGGGMLALPLATASLGTIPALLLLITIWGVSIYTSLLMLEINLRVGVGLNLHSITGKTLGKLGQ LIQGGSFLSLLFALTMVYLMGGSSLLESKMELVGMKMDNQFAVLLFTLIFGGFIAVGVGWIDKVSRVLFTTMIALLVVVV AYLMPEVDMGMMMTNTTDSLVDGRDLTNLWLAAIPIVFTSFGFHVCIATIVRYLDGDAMSLRKVLIIGSTIPLVCYILWL VVTLGTLGGKTVHEFDGSLPLLVTALQGVAESSILKHFIDLFANLALVTSFLGVTMSLFDYVAELTRAKESWKGRAQTWL LTFIPPLLCALYYPDGFFKVLGFAAIPLVVMIIFLPIAMALGLRKQNLGGYQVSGGNAALGLAAVAGLTIILAQLWVAL
Sequences:
>Translated_399_residues MNSKILGSIAIVAGTAIGGGMLALPLATASLGTIPALLLLITIWGVSIYTSLLMLEINLRVGVGLNLHSITGKTLGKLGQ LIQGGSFLSLLFALTMVYLMGGSSLLESKMELVGMKMDNQFAVLLFTLIFGGFIAVGVGWIDKVSRVLFTTMIALLVVVV AYLMPEVDMGMMMTNTTDSLVDGRDLTNLWLAAIPIVFTSFGFHVCIATIVRYLDGDAMSLRKVLIIGSTIPLVCYILWL VVTLGTLGGKTVHEFDGSLPLLVTALQGVAESSILKHFIDLFANLALVTSFLGVTMSLFDYVAELTRAKESWKGRAQTWL LTFIPPLLCALYYPDGFFKVLGFAAIPLVVMIIFLPIAMALGLRKQNLGGYQVSGGNAALGLAAVAGLTIILAQLWVAL >Mature_399_residues MNSKILGSIAIVAGTAIGGGMLALPLATASLGTIPALLLLITIWGVSIYTSLLMLEINLRVGVGLNLHSITGKTLGKLGQ LIQGGSFLSLLFALTMVYLMGGSSLLESKMELVGMKMDNQFAVLLFTLIFGGFIAVGVGWIDKVSRVLFTTMIALLVVVV AYLMPEVDMGMMMTNTTDSLVDGRDLTNLWLAAIPIVFTSFGFHVCIATIVRYLDGDAMSLRKVLIIGSTIPLVCYILWL VVTLGTLGGKTVHEFDGSLPLLVTALQGVAESSILKHFIDLFANLALVTSFLGVTMSLFDYVAELTRAKESWKGRAQTWL LTFIPPLLCALYYPDGFFKVLGFAAIPLVVMIIFLPIAMALGLRKQNLGGYQVSGGNAALGLAAVAGLTIILAQLWVAL
Specific function: Involved in transporting tyrosine across the cytoplasmic membrane [H]
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. Mtr/TnaB/TyrP permease subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788218, Length=403, Percent_Identity=40.6947890818859, Blast_Score=258, Evalue=5e-70, Organism=Escherichia coli, GI1790145, Length=394, Percent_Identity=29.4416243654822, Blast_Score=154, Evalue=7e-39, Organism=Escherichia coli, GI1789552, Length=372, Percent_Identity=26.8817204301075, Blast_Score=139, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002091 - InterPro: IPR013061 - InterPro: IPR013059 - InterPro: IPR018227 [H]
Pfam domain/function: PF03222 Trp_Tyr_perm [H]
EC number: NA
Molecular weight: Translated: 42572; Mature: 42572
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKILGSIAIVAGTAIGGGMLALPLATASLGTIPALLLLITIWGVSIYTSLLMLEINLR CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE VGVGLNLHSITGKTLGKLGQLIQGGSFLSLLFALTMVYLMGGSSLLESKMELVGMKMDNQ EECCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH FAVLLFTLIFGGFIAVGVGWIDKVSRVLFTTMIALLVVVVAYLMPEVDMGMMMTNTTDSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHH VDGRDLTNLWLAAIPIVFTSFGFHVCIATIVRYLDGDAMSLRKVLIIGSTIPLVCYILWL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHH VVTLGTLGGKTVHEFDGSLPLLVTALQGVAESSILKHFIDLFANLALVTSFLGVTMSLFD HHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVAELTRAKESWKGRAQTWLLTFIPPLLCALYYPDGFFKVLGFAAIPLVVMIIFLPIAMA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGLRKQNLGGYQVSGGNAALGLAAVAGLTIILAQLWVAL HCCHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNSKILGSIAIVAGTAIGGGMLALPLATASLGTIPALLLLITIWGVSIYTSLLMLEINLR CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE VGVGLNLHSITGKTLGKLGQLIQGGSFLSLLFALTMVYLMGGSSLLESKMELVGMKMDNQ EECCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCH FAVLLFTLIFGGFIAVGVGWIDKVSRVLFTTMIALLVVVVAYLMPEVDMGMMMTNTTDSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHH VDGRDLTNLWLAAIPIVFTSFGFHVCIATIVRYLDGDAMSLRKVLIIGSTIPLVCYILWL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHH VVTLGTLGGKTVHEFDGSLPLLVTALQGVAESSILKHFIDLFANLALVTSFLGVTMSLFD HHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVAELTRAKESWKGRAQTWLLTFIPPLLCALYYPDGFFKVLGFAAIPLVVMIIFLPIAMA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LGLRKQNLGGYQVSGGNAALGLAAVAGLTIILAQLWVAL HCCHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-tyrosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3049553; 9097040; 9278503 [H]