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The map label for this gene is rsmC

Identifier: 167622638

GI number: 167622638

Start: 860578

End: 861603

Strand: Reverse

Name: rsmC

Synonym: Shal_0698

Alternate gene names: 167622638

Gene position: 861603-860578 (Counterclockwise)

Preceding gene: 167622639

Following gene: 167622637

Centisome position: 16.48

GC content: 44.05

Gene sequence:

>1026_bases
ATGCTAACCAACGCTTCGCAAGTCCTTCTCAGAAACCGTGATTTAGTCAAAGACCAATCTGTATTGGTGCTTAACTATGA
AGGCGACCATCTACCCAAAGAGCTTTTGAATACAGCCCGCAGCGTATGTGGATTAGCATTAGATTATCATCATCACTTGA
TGATGCAGCCATATGCGGCGGCTAATTTAACACTCCACTTTGGCCATCAACTCCCCAATGATGAGAGTTTCGATACGGTT
ATTGTGTACTTTCCAAAAGCCAAAGCGTTAGCGCCATACCTATTTAACTTGGCGGCAAAACACCTTAAGCCTCAAGGCCA
GCTTATCGTCGTGGGGGAAAATAAAGGTGGCATTAAGTCTCTGCCTAAACAGTTACCAAGTTACTTTGATAAACCCTTTA
AAGCCGATAATGCCCGTCACTGTATCGTATTTTTAAGTGAGCTTAATGCAGCTGCTCCGACATTAAAACTAACTGACTGG
ATAAGCCGATATCAACTCGACACCCCACAAGGACAGGTAACCATCTGTAATTTAGTGGGTGTATTTAGCGAGAAAAAACT
TGATGAAGGCACAAAACTGTTACTTGAAAATCTACCTAAAATGCGCGGCAAAGTACTCGACTTTGGCTGTGGTGCAGGCG
TTATTGCCGCCGCATTACTCAAGGCTCAGCCTGAGCTAACCCTTGAGTGTGTTGATATCAATGCGATGGCACTAGCCTCC
TGCGAGTTCACCCTACAAGCCAATGGATTTAATGCCAAAATCTTCGCATCTGATGGCCTAGCACAAGCCGCTGGCCGCTA
TGACGGTATTATTTCCAATCCACCATTTCATGATGGCCTCGCTAGCACGACTAACATCGCCACTAATTTTGTAAAAGACA
GTGCAGCAAACCTAACCACTGGCGGGTTATTCCATATTGTCGCAAATCGCCATCTGCCTTATTCAGACACCATAGCAGAA
CACTTTGGTTCAGTTGATGTCACTGCCGAGAACAATAAATACAAAATTTATTCCAACGTAAAATAA

Upstream 100 bases:

>100_bases
ACCTATCCAATCTTCGTCAACACGCAAAAGAGTGCCAAACTCGCATTCGAAGGCGGTTTGGGTATAATTACAGACAATTA
AACTTCGACCTTGAATACTC

Downstream 100 bases:

>100_bases
CTACCCGCAAAAATCAGCTCTATGGCATGAGCTCTATCATGTCTTAGAGCCCTTATCTCACGCCCTTGATTCACACTATT
TATCACAGACGCTTTTTAAC

Product: rRNA (guanine-N(2)-)-methyltransferase

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MLTNASQVLLRNRDLVKDQSVLVLNYEGDHLPKELLNTARSVCGLALDYHHHLMMQPYAAANLTLHFGHQLPNDESFDTV
IVYFPKAKALAPYLFNLAAKHLKPQGQLIVVGENKGGIKSLPKQLPSYFDKPFKADNARHCIVFLSELNAAAPTLKLTDW
ISRYQLDTPQGQVTICNLVGVFSEKKLDEGTKLLLENLPKMRGKVLDFGCGAGVIAAALLKAQPELTLECVDINAMALAS
CEFTLQANGFNAKIFASDGLAQAAGRYDGIISNPPFHDGLASTTNIATNFVKDSAANLTTGGLFHIVANRHLPYSDTIAE
HFGSVDVTAENNKYKIYSNVK

Sequences:

>Translated_341_residues
MLTNASQVLLRNRDLVKDQSVLVLNYEGDHLPKELLNTARSVCGLALDYHHHLMMQPYAAANLTLHFGHQLPNDESFDTV
IVYFPKAKALAPYLFNLAAKHLKPQGQLIVVGENKGGIKSLPKQLPSYFDKPFKADNARHCIVFLSELNAAAPTLKLTDW
ISRYQLDTPQGQVTICNLVGVFSEKKLDEGTKLLLENLPKMRGKVLDFGCGAGVIAAALLKAQPELTLECVDINAMALAS
CEFTLQANGFNAKIFASDGLAQAAGRYDGIISNPPFHDGLASTTNIATNFVKDSAANLTTGGLFHIVANRHLPYSDTIAE
HFGSVDVTAENNKYKIYSNVK
>Mature_341_residues
MLTNASQVLLRNRDLVKDQSVLVLNYEGDHLPKELLNTARSVCGLALDYHHHLMMQPYAAANLTLHFGHQLPNDESFDTV
IVYFPKAKALAPYLFNLAAKHLKPQGQLIVVGENKGGIKSLPKQLPSYFDKPFKADNARHCIVFLSELNAAAPTLKLTDW
ISRYQLDTPQGQVTICNLVGVFSEKKLDEGTKLLLENLPKMRGKVLDFGCGAGVIAAALLKAQPELTLECVDINAMALAS
CEFTLQANGFNAKIFASDGLAQAAGRYDGIISNPPFHDGLASTTNIATNFVKDSAANLTTGGLFHIVANRHLPYSDTIAE
HFGSVDVTAENNKYKIYSNVK

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family

Homologues:

Organism=Escherichia coli, GI1790830, Length=343, Percent_Identity=35.8600583090379, Blast_Score=195, Evalue=4e-51,
Organism=Escherichia coli, GI87082206, Length=174, Percent_Identity=33.9080459770115, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMC_SHEHH (B0TSU8)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001672932.1
- ProteinModelPortal:   B0TSU8
- GeneID:   5906872
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_0698
- HOGENOM:   HBG296757
- OMA:   RHCQLWQ
- ProtClustDB:   CLSK905955
- BioCyc:   SHAL458817:SHAL_0698-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01862
- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR007848

Pfam domain/function: PF05175 MTS; PF08468 MTS_N

EC number: =2.1.1.172

Molecular weight: Translated: 37238; Mature: 37238

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTNASQVLLRNRDLVKDQSVLVLNYEGDHLPKELLNTARSVCGLALDYHHHLMMQPYAA
CCCCHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCC
ANLTLHFGHQLPNDESFDTVIVYFPKAKALAPYLFNLAAKHLKPQGQLIVVGENKGGIKS
CEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHH
LPKQLPSYFDKPFKADNARHCIVFLSELNAAAPTLKLTDWISRYQLDTPQGQVTICNLVG
HHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEHH
VFSEKKLDEGTKLLLENLPKMRGKVLDFGCGAGVIAAALLKAQPELTLECVDINAMALAS
HHHHHHCCHHHHHHHHHCHHHCCCEEECCCCHHHHHHHHHHCCCCCEEEEEECCEEEEEE
CEFTLQANGFNAKIFASDGLAQAAGRYDGIISNPPFHDGLASTTNIATNFVKDSAANLTT
EEEEEEECCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
GGLFHIVANRHLPYSDTIAEHFGSVDVTAENNKYKIYSNVK
CCEEEEEECCCCCCHHHHHHHCCCEEEEECCCCEEEEECCC
>Mature Secondary Structure
MLTNASQVLLRNRDLVKDQSVLVLNYEGDHLPKELLNTARSVCGLALDYHHHLMMQPYAA
CCCCHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCC
ANLTLHFGHQLPNDESFDTVIVYFPKAKALAPYLFNLAAKHLKPQGQLIVVGENKGGIKS
CEEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHH
LPKQLPSYFDKPFKADNARHCIVFLSELNAAAPTLKLTDWISRYQLDTPQGQVTICNLVG
HHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEEHH
VFSEKKLDEGTKLLLENLPKMRGKVLDFGCGAGVIAAALLKAQPELTLECVDINAMALAS
HHHHHHCCHHHHHHHHHCHHHCCCEEECCCCHHHHHHHHHHCCCCCEEEEEECCEEEEEE
CEFTLQANGFNAKIFASDGLAQAAGRYDGIISNPPFHDGLASTTNIATNFVKDSAANLTT
EEEEEEECCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
GGLFHIVANRHLPYSDTIAEHFGSVDVTAENNKYKIYSNVK
CCEEEEEECCCCCCHHHHHHHCCCEEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA