| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622635
Identifier: 167622635
GI number: 167622635
Start: 857058
End: 857441
Strand: Direct
Name: 167622635
Synonym: Shal_0695
Alternate gene names: NA
Gene position: 857058-857441 (Clockwise)
Preceding gene: 167622634
Following gene: 167622646
Centisome position: 16.4
GC content: 44.01
Gene sequence:
>384_bases ATGAATGAAGTAACCTTTGAAACCAGTTGGGGGGCAAAATTAAGCTTCTCTCCTATAGTGTCAAAAGCAGTTGCAGATAC ATTTGAGATAGAATCTGATGAGTGGCAGGGCTTTGCTGACATGGATTTTCATAGTGCTAACGGTTTGGCTAAAAAGCTAG GTAAACGATTACCCACATCCACAGAACTACATGAACTGCACCTTTGGCTAAGCAAAAACAGCGATTGGAGCTGGCCGACG AGCGCGAACGCTTATTGGTCGTCAACACCATCTCGTTTAGGTGGGCATTATGCGGTGTTATTGTGCAATGCGAACTGTGT TTGCAACAGTGATGAACGCCATTGTTATGTTTCGTATGTTAGCTCTGAAAGCGTGCCTTTATGA
Upstream 100 bases:
>100_bases CAGTCCGGCTGCATAACGGCAAGTCATACAGTATTGATGACAATTACTATGGCTTTGTTTCTTGTGTTAGTGACTCATAA ATTATTGCTAGGAAACTACT
Downstream 100 bases:
>100_bases ATCATCAATTTAAAAAGGGCATACAATAATGCCCTTTTTTATTGCCTTAACGGTAGCCGTTAGCTCTTTAAGATCTCTAA CGGTAGCGCCAACATCTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MNEVTFETSWGAKLSFSPIVSKAVADTFEIESDEWQGFADMDFHSANGLAKKLGKRLPTSTELHELHLWLSKNSDWSWPT SANAYWSSTPSRLGGHYAVLLCNANCVCNSDERHCYVSYVSSESVPL
Sequences:
>Translated_127_residues MNEVTFETSWGAKLSFSPIVSKAVADTFEIESDEWQGFADMDFHSANGLAKKLGKRLPTSTELHELHLWLSKNSDWSWPT SANAYWSSTPSRLGGHYAVLLCNANCVCNSDERHCYVSYVSSESVPL >Mature_127_residues MNEVTFETSWGAKLSFSPIVSKAVADTFEIESDEWQGFADMDFHSANGLAKKLGKRLPTSTELHELHLWLSKNSDWSWPT SANAYWSSTPSRLGGHYAVLLCNANCVCNSDERHCYVSYVSSESVPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14180; Mature: 14180
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEVTFETSWGAKLSFSPIVSKAVADTFEIESDEWQGFADMDFHSANGLAKKLGKRLPTS CCCEEEECCCCCEEECHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC TELHELHLWLSKNSDWSWPTSANAYWSSTPSRLGGHYAVLLCNANCVCNSDERHCYVSYV CCEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCEEECCCCCEEEEEEE SSESVPL CCCCCCC >Mature Secondary Structure MNEVTFETSWGAKLSFSPIVSKAVADTFEIESDEWQGFADMDFHSANGLAKKLGKRLPTS CCCEEEECCCCCEEECHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC TELHELHLWLSKNSDWSWPTSANAYWSSTPSRLGGHYAVLLCNANCVCNSDERHCYVSYV CCEEEEEEEEECCCCCCCCCCCCCEECCCCCCCCCEEEEEEECCCEEECCCCCEEEEEEE SSESVPL CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA