| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is fxsA [H]
Identifier: 167622612
GI number: 167622612
Start: 829645
End: 830280
Strand: Direct
Name: fxsA [H]
Synonym: Shal_0672
Alternate gene names: 167622612
Gene position: 829645-830280 (Clockwise)
Preceding gene: 167622603
Following gene: 167622614
Centisome position: 15.87
GC content: 46.07
Gene sequence:
>636_bases GTGTTTTTTATTTTGTTATTAATTTTTGTTTTAGTTCCTGTGATGGAGCTATCAGTACTGATCCGCGTGGGTGAAGTGTT AGGCAGCTGGACAACGGTCGCATTGGTTCTTTTTACTGCCGTAGTCGGTGTGTCTTTGGTGCGCAGCCAAGGCATTAGCA CCTTGATGCAAGTGCAGCAGAAGCTGGCTCGTGGCGAAGCACCAGGCCAAGAGATTGTTGAAGGAATGATGTTAGCGGTC GCAGGCTTACTGTTGCTTATTCCTGGTTTTGTAACCGACTTTATTGGTCTATTGCTACTCACACCGTTTATGCGTATTCC TGTTGCTAGGTTCTTCTATAAACGTATGCAGCATAAAGTGCAGGCAAAAGGTGGTTTCCAGTCAGGTTTTGGCCCAGGCT TTGGTGCTGGAATGGGGCCACAAGGAAAAAACCCATTTGAACATCCATTTGAAAATGAGAGTGGTCAGTCACCCTTTGAT CAAGGTAATACTTTCGATGGTGACTTTGAACGTAAAGCCGACCCAAGTGATAAGCGCCCAGAGAGCCATCAAGTAAAGGG ATCGACCTTTGAGGGCGAAACCGTTACCCGTAAAACGGATAAAGAGTCCGACGATAAACAACTGCCAAAGCACTAA
Upstream 100 bases:
>100_bases TAACAGCAGGTAATTGCAGTCTCTCAACAGGCAGCTACTTGAAAATAGACCGAGTTACCCCAATTTAGTTTTCATCACCA GCAAAAAATGTGAGGTCAGT
Downstream 100 bases:
>100_bases CGCTATGGTTGTTCATGCTCTAATTGCTTAGGGTTTCGAGGGTAAAAGTGGTCGGCACGTCGTTCTATCAGGTTAAATTT ACGGGTGTTTTTATAAGGCA
Product: FxsA cytoplasmic membrane protein
Products: NA
Alternate protein names: Suppressor of F exclusion of phage T7 [H]
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MFFILLLIFVLVPVMELSVLIRVGEVLGSWTTVALVLFTAVVGVSLVRSQGISTLMQVQQKLARGEAPGQEIVEGMMLAV AGLLLLIPGFVTDFIGLLLLTPFMRIPVARFFYKRMQHKVQAKGGFQSGFGPGFGAGMGPQGKNPFEHPFENESGQSPFD QGNTFDGDFERKADPSDKRPESHQVKGSTFEGETVTRKTDKESDDKQLPKH
Sequences:
>Translated_211_residues MFFILLLIFVLVPVMELSVLIRVGEVLGSWTTVALVLFTAVVGVSLVRSQGISTLMQVQQKLARGEAPGQEIVEGMMLAV AGLLLLIPGFVTDFIGLLLLTPFMRIPVARFFYKRMQHKVQAKGGFQSGFGPGFGAGMGPQGKNPFEHPFENESGQSPFD QGNTFDGDFERKADPSDKRPESHQVKGSTFEGETVTRKTDKESDDKQLPKH >Mature_211_residues MFFILLLIFVLVPVMELSVLIRVGEVLGSWTTVALVLFTAVVGVSLVRSQGISTLMQVQQKLARGEAPGQEIVEGMMLAV AGLLLLIPGFVTDFIGLLLLTPFMRIPVARFFYKRMQHKVQAKGGFQSGFGPGFGAGMGPQGKNPFEHPFENESGQSPFD QGNTFDGDFERKADPSDKRPESHQVKGSTFEGETVTRKTDKESDDKQLPKH
Specific function: Overexpression Alleviates The Exclusion Of Phage T7 In Cells Harboring The F Plasmid. [C]
COG id: COG3030
COG function: function code R; Protein affecting phage T7 exclusion by the F plasmid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0716 (fxsA) family [H]
Homologues:
Organism=Escherichia coli, GI87082376, Length=100, Percent_Identity=50, Blast_Score=70, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007313 [H]
Pfam domain/function: PF04186 FxsA [H]
EC number: NA
Molecular weight: Translated: 23158; Mature: 23158
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFILLLIFVLVPVMELSVLIRVGEVLGSWTTVALVLFTAVVGVSLVRSQGISTLMQVQQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLARGEAPGQEIVEGMMLAVAGLLLLIPGFVTDFIGLLLLTPFMRIPVARFFYKRMQHKV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAKGGFQSGFGPGFGAGMGPQGKNPFEHPFENESGQSPFDQGNTFDGDFERKADPSDKRP HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESHQVKGSTFEGETVTRKTDKESDDKQLPKH CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MFFILLLIFVLVPVMELSVLIRVGEVLGSWTTVALVLFTAVVGVSLVRSQGISTLMQVQQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLARGEAPGQEIVEGMMLAVAGLLLLIPGFVTDFIGLLLLTPFMRIPVARFFYKRMQHKV HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QAKGGFQSGFGPGFGAGMGPQGKNPFEHPFENESGQSPFDQGNTFDGDFERKADPSDKRP HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ESHQVKGSTFEGETVTRKTDKESDDKQLPKH CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7846149 [H]