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The map label for this gene is yidK [H]

Identifier: 167622606

GI number: 167622606

Start: 819345

End: 820766

Strand: Reverse

Name: yidK [H]

Synonym: Shal_0666

Alternate gene names: 167622606

Gene position: 820766-819345 (Counterclockwise)

Preceding gene: 167622607

Following gene: 167622605

Centisome position: 15.7

GC content: 47.54

Gene sequence:

>1422_bases
ATGGAACAGACTATTCAACTGGTTATATTTTTTGGCTTAACCGCCTTGGTAGGCTTAATCACCTACTTAAAGTGTCGCAA
AATCACCCGCAATACGAGTGATAGCAAAGATTACTTTCTGGCTGGCGGCGGCTTGAGCTGGGTCGTCGTCGCGGGGTCTT
TGATGATGACCAACATCAGCGCCGAGCAAATTGTGGGGATGAACGGCGCGCAAACCTTACTCGTGGCATGGTGGGAGATC
GCCGCAGCAGTGGGACTCATCATCCTAGCGAAATGGCTGATTCCGATCTATTACAAATATAACTGCACCACCACCACTGA
GCTACTTGAGCGCAAATATCAAGATAAAGGGATCCGCGCCATGGTGTCGGTACTATTTATGCTTGGTTATGCCTTCATCT
TGCTACCTGTCGTACTTTATACCGGCTCATTATTTATGAAGTCGATGTTTGGCTTATCGATTTCAGTGACAGTACTCGCG
GTTATCTTTGCAGTCGTCGGCGCTATCTATGCTATTTTTGGCGGCCTAAGAGCCATCGCAATTTCAGATAGCCTCAATGG
TGTTGGATTGTTATTCATGGGGGTCGTGGTTTCTTACCTAGCGCTTAATGCCGTCAATTGGGACCTATCAGGGATCCCGA
TTGAGCGCATCAGCTTGATTGGCGACAGTCAATCCGATATCCCTTGGCACACTCTGCTAACGGGTATGATCTTTATTCAG
ATCTTCTACTGGGGCACCAATATGGTGATCACCCAAAGAGCTTTGGCAGCCAAATCGGTGAAAGAAGCCCAGAAAGGCCT
TTATGCCGCAGTCGTTATGAAGCTTATCATCCCTATTATCGTGGTATTACCTGGGCTTGTTGCCTATAAGCTTTATGGGG
ATGTGGGTGATGTAGCCTACGGTAAGTTAGTTGGTGACATCTTACCAAGTTGGATGTCTGGCGCATTTGCCGCCGTGATG
GCGGGGGCAGTATTGAGCTCGTTTAACTCATGCTTAAACTCAGCAGCTGCACTTTATACCTGTGACATCCACCAAAACTA
CGTTAACCCTAATGCCGATGTACGTAAGATAGGTACCCGAGTGGCGTTAGTCTTTACGCTTATCTCATTATGCTTAGTGC
CGGTATTTGCTCAGTCGGCTAGCATCATCTCCCTGCTGCAGCAGCTAAATGGCCTCTACTCCATGCCGGTATTAGCCGCC
TTTATCTGCGCGCTTGCCTTTAAGGATGTCAATGCAAAAGCCATTAAGATAGGTCTAGTATTTGGTGTACTGGTGTATGC
GGTATTTACCTTTGTATGGAGCCCTCTGCACTTCATCCATATGATGGCAATAACACTCGCCGCCACCATATTGGTCACCC
TAGCACTGAGCAAGTTTGTATTTGGGCCCCAAAGCATCAATAGCCAACTTGTAACCGACTAA

Upstream 100 bases:

>100_bases
ACTATAGTTTATGGCCAATGATGCTCGCACAAGCTAGTGTCTAAAACGAATTTAGCTGAACAACGGATATTAAAACTAAA
AATAGCAGTGAAGGATCAAC

Downstream 100 bases:

>100_bases
CTCTAGCGATAACTCTTATGCCCTGCGATAACAGTAGGGCATAAACGCCTTTTGTCTACAGCGTTCTATTTGCAAAAAAA
CTCAGTTACACAATTTACAA

Product: SSS family solute/sodium (Na+) symporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 473

Protein sequence:

>473_residues
MEQTIQLVIFFGLTALVGLITYLKCRKITRNTSDSKDYFLAGGGLSWVVVAGSLMMTNISAEQIVGMNGAQTLLVAWWEI
AAAVGLIILAKWLIPIYYKYNCTTTTELLERKYQDKGIRAMVSVLFMLGYAFILLPVVLYTGSLFMKSMFGLSISVTVLA
VIFAVVGAIYAIFGGLRAIAISDSLNGVGLLFMGVVVSYLALNAVNWDLSGIPIERISLIGDSQSDIPWHTLLTGMIFIQ
IFYWGTNMVITQRALAAKSVKEAQKGLYAAVVMKLIIPIIVVLPGLVAYKLYGDVGDVAYGKLVGDILPSWMSGAFAAVM
AGAVLSSFNSCLNSAAALYTCDIHQNYVNPNADVRKIGTRVALVFTLISLCLVPVFAQSASIISLLQQLNGLYSMPVLAA
FICALAFKDVNAKAIKIGLVFGVLVYAVFTFVWSPLHFIHMMAITLAATILVTLALSKFVFGPQSINSQLVTD

Sequences:

>Translated_473_residues
MEQTIQLVIFFGLTALVGLITYLKCRKITRNTSDSKDYFLAGGGLSWVVVAGSLMMTNISAEQIVGMNGAQTLLVAWWEI
AAAVGLIILAKWLIPIYYKYNCTTTTELLERKYQDKGIRAMVSVLFMLGYAFILLPVVLYTGSLFMKSMFGLSISVTVLA
VIFAVVGAIYAIFGGLRAIAISDSLNGVGLLFMGVVVSYLALNAVNWDLSGIPIERISLIGDSQSDIPWHTLLTGMIFIQ
IFYWGTNMVITQRALAAKSVKEAQKGLYAAVVMKLIIPIIVVLPGLVAYKLYGDVGDVAYGKLVGDILPSWMSGAFAAVM
AGAVLSSFNSCLNSAAALYTCDIHQNYVNPNADVRKIGTRVALVFTLISLCLVPVFAQSASIISLLQQLNGLYSMPVLAA
FICALAFKDVNAKAIKIGLVFGVLVYAVFTFVWSPLHFIHMMAITLAATILVTLALSKFVFGPQSINSQLVTD
>Mature_473_residues
MEQTIQLVIFFGLTALVGLITYLKCRKITRNTSDSKDYFLAGGGLSWVVVAGSLMMTNISAEQIVGMNGAQTLLVAWWEI
AAAVGLIILAKWLIPIYYKYNCTTTTELLERKYQDKGIRAMVSVLFMLGYAFILLPVVLYTGSLFMKSMFGLSISVTVLA
VIFAVVGAIYAIFGGLRAIAISDSLNGVGLLFMGVVVSYLALNAVNWDLSGIPIERISLIGDSQSDIPWHTLLTGMIFIQ
IFYWGTNMVITQRALAAKSVKEAQKGLYAAVVMKLIIPIIVVLPGLVAYKLYGDVGDVAYGKLVGDILPSWMSGAFAAVM
AGAVLSSFNSCLNSAAALYTCDIHQNYVNPNADVRKIGTRVALVFTLISLCLVPVFAQSASIISLLQQLNGLYSMPVLAA
FICALAFKDVNAKAIKIGLVFGVLVYAVFTFVWSPLHFIHMMAITLAATILVTLALSKFVFGPQSINSQLVTD

Specific function: Unknown

COG id: COG4146

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI17941285, Length=455, Percent_Identity=28.5714285714286, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI110835708, Length=455, Percent_Identity=27.2527472527473, Blast_Score=142, Evalue=7e-34,
Organism=Homo sapiens, GI14140236, Length=522, Percent_Identity=24.5210727969349, Blast_Score=135, Evalue=9e-32,
Organism=Homo sapiens, GI4507031, Length=458, Percent_Identity=26.6375545851528, Blast_Score=133, Evalue=5e-31,
Organism=Homo sapiens, GI4507033, Length=455, Percent_Identity=26.5934065934066, Blast_Score=132, Evalue=8e-31,
Organism=Homo sapiens, GI206597483, Length=433, Percent_Identity=26.7898383371824, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI109659836, Length=534, Percent_Identity=24.9063670411985, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI206597487, Length=458, Percent_Identity=25.5458515283843, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI109659839, Length=550, Percent_Identity=24.5454545454545, Blast_Score=122, Evalue=1e-27,
Organism=Homo sapiens, GI256985183, Length=430, Percent_Identity=24.6511627906977, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI167466278, Length=346, Percent_Identity=26.0115606936416, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI157671931, Length=423, Percent_Identity=21.9858156028369, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI1790113, Length=480, Percent_Identity=35.2083333333333, Blast_Score=283, Evalue=1e-77,
Organism=Caenorhabditis elegans, GI115533094, Length=470, Percent_Identity=24.468085106383, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI28574994, Length=437, Percent_Identity=25.1716247139588, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24645928, Length=428, Percent_Identity=25.9345794392523, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28573698, Length=426, Percent_Identity=21.1267605633803, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI221459586, Length=425, Percent_Identity=24, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221459588, Length=429, Percent_Identity=23.7762237762238, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24651739, Length=446, Percent_Identity=22.6457399103139, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI221459584, Length=426, Percent_Identity=21.3615023474178, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24650192, Length=428, Percent_Identity=22.6635514018692, Blast_Score=65, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 51139; Mature: 51139

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTIQLVIFFGLTALVGLITYLKCRKITRNTSDSKDYFLAGGGLSWVVVAGSLMMTNIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCC
AEQIVGMNGAQTLLVAWWEIAAAVGLIILAKWLIPIYYKYNCTTTTELLERKYQDKGIRA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHHH
MVSVLFMLGYAFILLPVVLYTGSLFMKSMFGLSISVTVLAVIFAVVGAIYAIFGGLRAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHEEE
ISDSLNGVGLLFMGVVVSYLALNAVNWDLSGIPIERISLIGDSQSDIPWHTLLTGMIFIQ
ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHH
IFYWGTNMVITQRALAAKSVKEAQKGLYAAVVMKLIIPIIVVLPGLVAYKLYGDVGDVAY
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GKLVGDILPSWMSGAFAAVMAGAVLSSFNSCLNSAAALYTCDIHQNYVNPNADVRKIGTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECHHCCCCCCCHHHHHHHH
VALVFTLISLCLVPVFAQSASIISLLQQLNGLYSMPVLAAFICALAFKDVNAKAIKIGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
FGVLVYAVFTFVWSPLHFIHMMAITLAATILVTLALSKFVFGPQSINSQLVTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCC
>Mature Secondary Structure
MEQTIQLVIFFGLTALVGLITYLKCRKITRNTSDSKDYFLAGGGLSWVVVAGSLMMTNIS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCC
AEQIVGMNGAQTLLVAWWEIAAAVGLIILAKWLIPIYYKYNCTTTTELLERKYQDKGIRA
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCHHHH
MVSVLFMLGYAFILLPVVLYTGSLFMKSMFGLSISVTVLAVIFAVVGAIYAIFGGLRAIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHEEE
ISDSLNGVGLLFMGVVVSYLALNAVNWDLSGIPIERISLIGDSQSDIPWHTLLTGMIFIQ
ECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHH
IFYWGTNMVITQRALAAKSVKEAQKGLYAAVVMKLIIPIIVVLPGLVAYKLYGDVGDVAY
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
GKLVGDILPSWMSGAFAAVMAGAVLSSFNSCLNSAAALYTCDIHQNYVNPNADVRKIGTR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECHHCCCCCCCHHHHHHHH
VALVFTLISLCLVPVFAQSASIISLLQQLNGLYSMPVLAAFICALAFKDVNAKAIKIGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
FGVLVYAVFTFVWSPLHFIHMMAITLAATILVTLALSKFVFGPQSINSQLVTD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]