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The map label for this gene is yajR [H]

Identifier: 167622572

GI number: 167622572

Start: 763472

End: 764839

Strand: Direct

Name: yajR [H]

Synonym: Shal_0632

Alternate gene names: 167622572

Gene position: 763472-764839 (Clockwise)

Preceding gene: 167622567

Following gene: 167622573

Centisome position: 14.61

GC content: 47.51

Gene sequence:

>1368_bases
ATGGCCAACCAGGGACTTTCCAAGACTGAGAAAAAGGTCGCATTTTCTTTAGCCAGTGTATTTGGGCTGCGAATGATGGG
CTTGTTTATGATCATGCCTGTATTTGCACTTTACGGGCAGCACTTAGAAGGTTTTTCACCTTTATGGGTGGGTATCGCCA
TCGGCGCATATGGCTTAACCCAAGCGATTCTACAAATCCCGATGGGGATCTTATCTGATAAATTTGGCCGTAAGCCAATC
ATTCTCACAGGATTATTGATTTTTGCCTTAGGCAGTTTAGTCGCCGCCAATGCTGAGACGATTTATGGCGTTGTTGCTGG
TCGAGCTCTGCAAGGCATGGGGGCAATTGCTGCAGCTGTTCTTGCGCTAGCGGCAGATTTAACTCGCGATGAGCAACGTA
CCAAGGTGATGGCAATTATCGGTATGTGTATCGGTTTCTCGTTTGCCTTGTCGTTGTTAGTTGGACCCATTGTGGCGCAG
CACTTAGGCTTGTCGGGGCTGTTCTTTATGACGGCCGGACTGGCATTGCTAGGGATGTTGATAGTACAGCTGTTAGTGCC
GACTCCTGTCGGTCAGGCCCCAAAGGGGGATACGGTCGCCGCGCCTGAAAAGCTTAAACGTATGTTGCTTGACCCGCAGC
TATTTAGACTCGACGCCGGAATTTTTATTTTACACTTAGTGCTGACGGCCGTCTTTGTGGCGCTTCCCCTAGATTTAGTC
GATGCAGGCCTACCGAAAGAAGAGCACTGGATGCTCTATTTCCCTGCCTTTATGGGGGCATTTTTCTTGATGGTGCCGCT
GATTATTATTGGGGTTAAACGCAATAATACTAAAGGCATGTTTCAAGTTGCCCTCATTATTATGATGGTTGCACTGGGCT
CGATGGCGATGTTTGCCAATAATTTAGTAGTATTGAGCATTGCCGTGGTGCTGTTCTTTACCGGCTTTAACTACCTAGAA
GCTTCATTACCAAGTTTGATTGCTAAGTTTTGTCCCGTTGGTGATAAAGGCTCTGCAATGGGCGTTTATTCGACGAGCCA
ATTCTTAGGTGCGTTTTGTGGTGGTTTATTGGGCGGTGGCGCCTATCAGCTGGTCGGTGCATCAGGAGTCTTTGCGGTTG
CATTAGGCTTAATGTGCCTGTGGTTTTTACTGACCTTCGGCATGAAAAATCCTGTGCTACTCAAGAGTTACACATTGGAA
GCGAATGTGACCGATAAACAGAGTGCAGTGACCATGGCTACTGAGTTGTCGGCGTTAGCGGGCGTGTCAGAAGCTATCGT
TGTACTCGAAGAAAAAGTGGCTTATTTAAAAGTAGATGACCATTTCGATTTGAGAGAAGCCAGAGCTGTGTTAGGCTCTG
TCGATTAG

Upstream 100 bases:

>100_bases
CATGGTTTAACTTTGCATCTTTTATTTTTACTTTTGGGCTATTGAAAAACTTCGTGATAAACTGCGCGACTTATTTCAAG
TTCACAGATCAGGGCGGGGC

Downstream 100 bases:

>100_bases
GTAAAATTTAATATACGTTCCAGGAGATTTCAATGGCTAGTCGTGGTGTCAATAAAGTAATTTTGGTCGGTAATTTAGGA
CAAGATCCTGAAGTACGTTA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MANQGLSKTEKKVAFSLASVFGLRMMGLFMIMPVFALYGQHLEGFSPLWVGIAIGAYGLTQAILQIPMGILSDKFGRKPI
ILTGLLIFALGSLVAANAETIYGVVAGRALQGMGAIAAAVLALAADLTRDEQRTKVMAIIGMCIGFSFALSLLVGPIVAQ
HLGLSGLFFMTAGLALLGMLIVQLLVPTPVGQAPKGDTVAAPEKLKRMLLDPQLFRLDAGIFILHLVLTAVFVALPLDLV
DAGLPKEEHWMLYFPAFMGAFFLMVPLIIIGVKRNNTKGMFQVALIIMMVALGSMAMFANNLVVLSIAVVLFFTGFNYLE
ASLPSLIAKFCPVGDKGSAMGVYSTSQFLGAFCGGLLGGGAYQLVGASGVFAVALGLMCLWFLLTFGMKNPVLLKSYTLE
ANVTDKQSAVTMATELSALAGVSEAIVVLEEKVAYLKVDDHFDLREARAVLGSVD

Sequences:

>Translated_455_residues
MANQGLSKTEKKVAFSLASVFGLRMMGLFMIMPVFALYGQHLEGFSPLWVGIAIGAYGLTQAILQIPMGILSDKFGRKPI
ILTGLLIFALGSLVAANAETIYGVVAGRALQGMGAIAAAVLALAADLTRDEQRTKVMAIIGMCIGFSFALSLLVGPIVAQ
HLGLSGLFFMTAGLALLGMLIVQLLVPTPVGQAPKGDTVAAPEKLKRMLLDPQLFRLDAGIFILHLVLTAVFVALPLDLV
DAGLPKEEHWMLYFPAFMGAFFLMVPLIIIGVKRNNTKGMFQVALIIMMVALGSMAMFANNLVVLSIAVVLFFTGFNYLE
ASLPSLIAKFCPVGDKGSAMGVYSTSQFLGAFCGGLLGGGAYQLVGASGVFAVALGLMCLWFLLTFGMKNPVLLKSYTLE
ANVTDKQSAVTMATELSALAGVSEAIVVLEEKVAYLKVDDHFDLREARAVLGSVD
>Mature_454_residues
ANQGLSKTEKKVAFSLASVFGLRMMGLFMIMPVFALYGQHLEGFSPLWVGIAIGAYGLTQAILQIPMGILSDKFGRKPII
LTGLLIFALGSLVAANAETIYGVVAGRALQGMGAIAAAVLALAADLTRDEQRTKVMAIIGMCIGFSFALSLLVGPIVAQH
LGLSGLFFMTAGLALLGMLIVQLLVPTPVGQAPKGDTVAAPEKLKRMLLDPQLFRLDAGIFILHLVLTAVFVALPLDLVD
AGLPKEEHWMLYFPAFMGAFFLMVPLIIIGVKRNNTKGMFQVALIIMMVALGSMAMFANNLVVLSIAVVLFFTGFNYLEA
SLPSLIAKFCPVGDKGSAMGVYSTSQFLGAFCGGLLGGGAYQLVGASGVFAVALGLMCLWFLLTFGMKNPVLLKSYTLEA
NVTDKQSAVTMATELSALAGVSEAIVVLEEKVAYLKVDDHFDLREARAVLGSVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=453, Percent_Identity=41.280353200883, Blast_Score=340, Evalue=8e-95,
Organism=Escherichia coli, GI48994889, Length=135, Percent_Identity=33.3333333333333, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48247; Mature: 48115

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQGLSKTEKKVAFSLASVFGLRMMGLFMIMPVFALYGQHLEGFSPLWVGIAIGAYGLT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QAILQIPMGILSDKFGRKPIILTGLLIFALGSLVAANAETIYGVVAGRALQGMGAIAAAV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LALAADLTRDEQRTKVMAIIGMCIGFSFALSLLVGPIVAQHLGLSGLFFMTAGLALLGML
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IVQLLVPTPVGQAPKGDTVAAPEKLKRMLLDPQLFRLDAGIFILHLVLTAVFVALPLDLV
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAGLPKEEHWMLYFPAFMGAFFLMVPLIIIGVKRNNTKGMFQVALIIMMVALGSMAMFAN
HCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
NLVVLSIAVVLFFTGFNYLEASLPSLIAKFCPVGDKGSAMGVYSTSQFLGAFCGGLLGGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHCCC
AYQLVGASGVFAVALGLMCLWFLLTFGMKNPVLLKSYTLEANVTDKQSAVTMATELSALA
HHEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
GVSEAIVVLEEKVAYLKVDDHFDLREARAVLGSVD
CHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCC
>Mature Secondary Structure 
ANQGLSKTEKKVAFSLASVFGLRMMGLFMIMPVFALYGQHLEGFSPLWVGIAIGAYGLT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QAILQIPMGILSDKFGRKPIILTGLLIFALGSLVAANAETIYGVVAGRALQGMGAIAAAV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LALAADLTRDEQRTKVMAIIGMCIGFSFALSLLVGPIVAQHLGLSGLFFMTAGLALLGML
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IVQLLVPTPVGQAPKGDTVAAPEKLKRMLLDPQLFRLDAGIFILHLVLTAVFVALPLDLV
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAGLPKEEHWMLYFPAFMGAFFLMVPLIIIGVKRNNTKGMFQVALIIMMVALGSMAMFAN
HCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
NLVVLSIAVVLFFTGFNYLEASLPSLIAKFCPVGDKGSAMGVYSTSQFLGAFCGGLLGGG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHHHHHHHHHHHCCC
AYQLVGASGVFAVALGLMCLWFLLTFGMKNPVLLKSYTLEANVTDKQSAVTMATELSALA
HHEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
GVSEAIVVLEEKVAYLKVDDHFDLREARAVLGSVD
CHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]