| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is deaD [H]
Identifier: 167622568
GI number: 167622568
Start: 756874
End: 758751
Strand: Reverse
Name: deaD [H]
Synonym: Shal_0628
Alternate gene names: 167622568
Gene position: 758751-756874 (Counterclockwise)
Preceding gene: 167622569
Following gene: 167622561
Centisome position: 14.52
GC content: 46.54
Gene sequence:
>1878_bases ATGTCATCCAATGAAAAAACTTTCCGCGAACTCGGTCTAAACGAGTCTTTAGTGCGTGCTCTTGACGATCTTGGTTATGA AAAACCAACACCGATCCAAGCCGCAAGTATCGAGCCTCTTATGGCGAATAAAGATATTTTAGGTCAAGCGCAAACTGGTA CAGGTAAAACAGGTGCTTTCGCACTACCTTTGCTAAACAGCATTGACCCAAATACTAATGCACCACAAATTCTAGTACTA GCGCCAACACGTGAACTTGCCGTTCAGGTTGCTGAAGCGTTCGCTAGCTACGCAAAATACATGAAAGGCCTACACGTTCT GCCAATTTACGGTGGACAAAGCATGCAACAGCAGTTGAATGCACTACGTCGTGGCCCTCAAATCATCGTTGGTACTCCAG GCCGTGTTATGGACCATATGCGTCGTGGCACACTAAAGCTTGATACATTAAAAGCTATGGTTTTGGACGAAGCTGACGAA ATGCTAAAAATGGGCTTCATCGATGATATCGAATGGATCCTTGAGCACACGCCTAAGACTCGTCAACTAGCGTTATTCTC GGCAACTATGCCTGAGCAAATTAAGCGTGTTGCTAACAAATATTTAGATAACCCTGTTCACGTTAAAATCGCGGCAACAA CTTCTACAGTTGAAACCATCGAGCAGCGTTTCGTTCAAGTATCACAGCACAACAAACTAGAAGCACTTGTACGTGTTCTA GAAGTTGAGAAGACTGAAGGTATCATTATCTTCGTTCGTACTCGTAACAGCTGTGTTGAATTAGCTGAAAAACTAGAAGC TCGCGGTTATGCATCATCACCACTACACGGTGACATGAACCAGCAAGCACGTGAGCGTGCTATTGACCAACTTAAACGTG GCCAACTAGACATCATTATTGCTACTGACGTTGCTGCACGTGGTCTTGACGTTGAACGTATTGGACACGTAGTTAACTAC GATATCCCATATGATACTGAAGCTTATGTTCACCGTATTGGCCGTACTGGCCGTGCTGGTCGTACAGGTATGGCGATTCT TTTTGTTACACACCGTGAAATGCGTATGCTACGCACTATCGAACGTGCAACTAACAGCCGTATTGCTCCAATGGACGTAC CAAGCCCTGAGACAGTGACTGAACGTCGTCTTTCTCGTCTAGGTGAGCAAGTAGCTGAAATCATCTCTCAAGATTTAGAG TTCATGAAAGGTGCGGTGGCAACACTTTGTCAGCAATTAGAAGTCGATACAGACATATTAGCTGCTGCACTACTTAAGCA AGTACAAAAAGATCGTCCATTGCAACTACATACAATGAACGAGCGTCAACGTGATAGCCGTGATGACCGTAATTCACGTG ATCGTGATGACCGTGGTTCTCGTGACCGCAATGATCGTGGTCCACGCGATCGCAGCGACCGTCCACGTCGTGAGTCTCGT CCAACACCTGCAAACTTAGGTGCAGCGGATTCACTGAAGGACAATCCAGATGTTAAAATGTGCCGTTACATCATCGATGT AGGTCGTGACAATGGTGTTGGTGTAGGTAACATCGTTGGTGCCGTAGCTAACGAAGCAAACATCGATAGCCGTTACATTG GTCAAATCCAACTGTTCGATCAAGTGACTGCAATTGACTTGCCAGATGGCATGCCAAAAGAAGTTTTACAGCACCTTAAG AAAGTGCGTGTTTGTGGCCGTCCACTAAACATCCGTGAAGCTGCTGGCGAAACGTTTGCAAACACTTCTGGTGGCGATAG CCGTCCACCACGCCGTCCACGCAAGCCAGGTGGTGAGCGTAGTGGTAGTGACCGTGGTGACCGTCGTCCTTCTGGTGACA GAAAGCCGCACCGTAAAGGTCCAAAAGACGCTGAATAA
Upstream 100 bases:
>100_bases CTGATACGTTTTTCGGTGCGGGAAGTCGACACGGGGTTGATTTTCTGTCTTAAACATCGGCACATTCCAAGTGCTCTGCT ATTCCACAAGGCTACAACCC
Downstream 100 bases:
>100_bases GTCTAAGTTGTTGGAACCTCTGTTCCAACAAAATTAGACCAAAGAAAAGGAGCCATTCGGCTCCTTTTTTGTTTTCTGTC TTATAGACTCCGTACTCGAT
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD [H]
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MSSNEKTFRELGLNESLVRALDDLGYEKPTPIQAASIEPLMANKDILGQAQTGTGKTGAFALPLLNSIDPNTNAPQILVL APTRELAVQVAEAFASYAKYMKGLHVLPIYGGQSMQQQLNALRRGPQIIVGTPGRVMDHMRRGTLKLDTLKAMVLDEADE MLKMGFIDDIEWILEHTPKTRQLALFSATMPEQIKRVANKYLDNPVHVKIAATTSTVETIEQRFVQVSQHNKLEALVRVL EVEKTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAIDQLKRGQLDIIIATDVAARGLDVERIGHVVNY DIPYDTEAYVHRIGRTGRAGRTGMAILFVTHREMRMLRTIERATNSRIAPMDVPSPETVTERRLSRLGEQVAEIISQDLE FMKGAVATLCQQLEVDTDILAAALLKQVQKDRPLQLHTMNERQRDSRDDRNSRDRDDRGSRDRNDRGPRDRSDRPRRESR PTPANLGAADSLKDNPDVKMCRYIIDVGRDNGVGVGNIVGAVANEANIDSRYIGQIQLFDQVTAIDLPDGMPKEVLQHLK KVRVCGRPLNIREAAGETFANTSGGDSRPPRRPRKPGGERSGSDRGDRRPSGDRKPHRKGPKDAE
Sequences:
>Translated_625_residues MSSNEKTFRELGLNESLVRALDDLGYEKPTPIQAASIEPLMANKDILGQAQTGTGKTGAFALPLLNSIDPNTNAPQILVL APTRELAVQVAEAFASYAKYMKGLHVLPIYGGQSMQQQLNALRRGPQIIVGTPGRVMDHMRRGTLKLDTLKAMVLDEADE MLKMGFIDDIEWILEHTPKTRQLALFSATMPEQIKRVANKYLDNPVHVKIAATTSTVETIEQRFVQVSQHNKLEALVRVL EVEKTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAIDQLKRGQLDIIIATDVAARGLDVERIGHVVNY DIPYDTEAYVHRIGRTGRAGRTGMAILFVTHREMRMLRTIERATNSRIAPMDVPSPETVTERRLSRLGEQVAEIISQDLE FMKGAVATLCQQLEVDTDILAAALLKQVQKDRPLQLHTMNERQRDSRDDRNSRDRDDRGSRDRNDRGPRDRSDRPRRESR PTPANLGAADSLKDNPDVKMCRYIIDVGRDNGVGVGNIVGAVANEANIDSRYIGQIQLFDQVTAIDLPDGMPKEVLQHLK KVRVCGRPLNIREAAGETFANTSGGDSRPPRRPRKPGGERSGSDRGDRRPSGDRKPHRKGPKDAE >Mature_624_residues SSNEKTFRELGLNESLVRALDDLGYEKPTPIQAASIEPLMANKDILGQAQTGTGKTGAFALPLLNSIDPNTNAPQILVLA PTRELAVQVAEAFASYAKYMKGLHVLPIYGGQSMQQQLNALRRGPQIIVGTPGRVMDHMRRGTLKLDTLKAMVLDEADEM LKMGFIDDIEWILEHTPKTRQLALFSATMPEQIKRVANKYLDNPVHVKIAATTSTVETIEQRFVQVSQHNKLEALVRVLE VEKTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAIDQLKRGQLDIIIATDVAARGLDVERIGHVVNYD IPYDTEAYVHRIGRTGRAGRTGMAILFVTHREMRMLRTIERATNSRIAPMDVPSPETVTERRLSRLGEQVAEIISQDLEF MKGAVATLCQQLEVDTDILAAALLKQVQKDRPLQLHTMNERQRDSRDDRNSRDRDDRGSRDRNDRGPRDRSDRPRRESRP TPANLGAADSLKDNPDVKMCRYIIDVGRDNGVGVGNIVGAVANEANIDSRYIGQIQLFDQVTAIDLPDGMPKEVLQHLKK VRVCGRPLNIREAAGETFANTSGGDSRPPRRPRKPGGERSGSDRGDRRPSGDRKPHRKGPKDAE
Specific function: Has a helix-destabilizing activity. Plays a key role in optimal cell growth at low temperature and is required for normal cell division [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=370, Percent_Identity=37.8378378378378, Blast_Score=276, Evalue=5e-74, Organism=Homo sapiens, GI20149629, Length=365, Percent_Identity=40, Blast_Score=272, Evalue=6e-73, Organism=Homo sapiens, GI41327771, Length=393, Percent_Identity=37.6590330788804, Blast_Score=268, Evalue=8e-72, Organism=Homo sapiens, GI301171467, Length=378, Percent_Identity=37.5661375661376, Blast_Score=258, Evalue=9e-69, Organism=Homo sapiens, GI301171475, Length=378, Percent_Identity=37.5661375661376, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI87196351, Length=378, Percent_Identity=37.5661375661376, Blast_Score=258, Evalue=1e-68, Organism=Homo sapiens, GI169881239, Length=378, Percent_Identity=37.5661375661376, Blast_Score=258, Evalue=2e-68, Organism=Homo sapiens, GI13514809, Length=378, Percent_Identity=37.5661375661376, Blast_Score=258, Evalue=2e-68, Organism=Homo sapiens, GI4503529, Length=367, Percent_Identity=40.0544959128065, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI13129006, Length=387, Percent_Identity=38.2428940568475, Blast_Score=252, Evalue=8e-67, Organism=Homo sapiens, GI83700235, Length=370, Percent_Identity=39.7297297297297, Blast_Score=252, Evalue=9e-67, Organism=Homo sapiens, GI31542656, Length=380, Percent_Identity=37.1052631578947, Blast_Score=247, Evalue=3e-65, Organism=Homo sapiens, GI164664518, Length=374, Percent_Identity=32.8877005347594, Blast_Score=246, Evalue=7e-65, Organism=Homo sapiens, GI50659095, Length=390, Percent_Identity=37.6923076923077, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI224593278, Length=378, Percent_Identity=37.037037037037, Blast_Score=243, Evalue=4e-64, Organism=Homo sapiens, GI4758112, Length=353, Percent_Identity=33.9943342776204, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI18375623, Length=353, Percent_Identity=33.9943342776204, Blast_Score=241, Evalue=2e-63, Organism=Homo sapiens, GI222352149, Length=354, Percent_Identity=38.4180790960452, Blast_Score=240, Evalue=4e-63, Organism=Homo sapiens, GI21040371, Length=353, Percent_Identity=34.5609065155807, Blast_Score=239, Evalue=8e-63, Organism=Homo sapiens, GI4758138, Length=375, Percent_Identity=36.8, Blast_Score=236, Evalue=4e-62, Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=37.0473537604457, Blast_Score=236, Evalue=6e-62, Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=37.0473537604457, Blast_Score=236, Evalue=6e-62, Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=37.0473537604457, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=37.0473537604457, Blast_Score=235, Evalue=8e-62, Organism=Homo sapiens, GI41327773, Length=367, Percent_Identity=35.9673024523161, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI45446747, Length=371, Percent_Identity=34.7708894878706, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI45446743, Length=371, Percent_Identity=34.7708894878706, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=34.453781512605, Blast_Score=229, Evalue=4e-60, Organism=Homo sapiens, GI41327776, Length=366, Percent_Identity=36.3387978142077, Blast_Score=227, Evalue=3e-59, Organism=Homo sapiens, GI148613856, Length=376, Percent_Identity=34.8404255319149, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI38201710, Length=376, Percent_Identity=34.8404255319149, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI55749865, Length=362, Percent_Identity=33.4254143646409, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI51094101, Length=354, Percent_Identity=32.4858757062147, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI164419743, Length=354, Percent_Identity=32.4858757062147, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI188035877, Length=382, Percent_Identity=32.9842931937173, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI256223453, Length=444, Percent_Identity=30.8558558558559, Blast_Score=210, Evalue=3e-54, Organism=Homo sapiens, GI6005743, Length=385, Percent_Identity=33.2467532467532, Blast_Score=209, Evalue=6e-54, Organism=Homo sapiens, GI8922886, Length=385, Percent_Identity=33.2467532467532, Blast_Score=209, Evalue=8e-54, Organism=Homo sapiens, GI62241022, Length=367, Percent_Identity=33.2425068119891, Blast_Score=199, Evalue=5e-51, Organism=Homo sapiens, GI41327779, Length=397, Percent_Identity=32.9974811083123, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI62241024, Length=353, Percent_Identity=33.9943342776204, Blast_Score=194, Evalue=2e-49, Organism=Homo sapiens, GI38327634, Length=410, Percent_Identity=31.219512195122, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI13514831, Length=415, Percent_Identity=31.8072289156626, Blast_Score=189, Evalue=1e-47, Organism=Homo sapiens, GI38569505, Length=385, Percent_Identity=30.9090909090909, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI38569503, Length=385, Percent_Identity=30.9090909090909, Blast_Score=183, Evalue=5e-46, Organism=Homo sapiens, GI164419732, Length=383, Percent_Identity=32.8981723237598, Blast_Score=183, Evalue=5e-46, Organism=Homo sapiens, GI9506931, Length=393, Percent_Identity=31.2977099236641, Blast_Score=182, Evalue=1e-45, Organism=Homo sapiens, GI17505907, Length=418, Percent_Identity=28.4688995215311, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI256773275, Length=404, Percent_Identity=30.4455445544554, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI4826686, Length=340, Percent_Identity=30.2941176470588, Blast_Score=145, Evalue=9e-35, Organism=Homo sapiens, GI9966805, Length=346, Percent_Identity=29.7687861271676, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=34.5622119815668, Blast_Score=117, Evalue=4e-26, Organism=Homo sapiens, GI154759257, Length=404, Percent_Identity=26.2376237623762, Blast_Score=110, Evalue=5e-24, Organism=Escherichia coli, GI87082221, Length=576, Percent_Identity=51.5625, Blast_Score=531, Evalue=1e-152, Organism=Escherichia coli, GI1787016, Length=377, Percent_Identity=40.5835543766578, Blast_Score=287, Evalue=1e-78, Organism=Escherichia coli, GI1787605, Length=333, Percent_Identity=41.4414414414414, Blast_Score=279, Evalue=3e-76, Organism=Escherichia coli, GI1790214, Length=388, Percent_Identity=37.3711340206186, Blast_Score=253, Evalue=3e-68, Organism=Escherichia coli, GI1788930, Length=372, Percent_Identity=38.9784946236559, Blast_Score=216, Evalue=4e-57, Organism=Escherichia coli, GI48994977, Length=356, Percent_Identity=22.752808988764, Blast_Score=76, Evalue=5e-15, Organism=Caenorhabditis elegans, GI71987143, Length=377, Percent_Identity=38.1962864721485, Blast_Score=281, Evalue=8e-76, Organism=Caenorhabditis elegans, GI71995724, Length=370, Percent_Identity=37.2972972972973, Blast_Score=273, Evalue=2e-73, Organism=Caenorhabditis elegans, GI17507121, Length=370, Percent_Identity=37.027027027027, Blast_Score=272, Evalue=4e-73, Organism=Caenorhabditis elegans, GI17555296, Length=358, Percent_Identity=39.3854748603352, Blast_Score=265, Evalue=7e-71, Organism=Caenorhabditis elegans, GI17510307, Length=395, Percent_Identity=38.9873417721519, Blast_Score=259, Evalue=3e-69, Organism=Caenorhabditis elegans, GI17510309, Length=395, Percent_Identity=38.9873417721519, Blast_Score=259, Evalue=3e-69, Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=40.4371584699454, Blast_Score=259, Evalue=4e-69, Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=37.7308707124011, Blast_Score=249, Evalue=4e-66, Organism=Caenorhabditis elegans, GI86570094, Length=370, Percent_Identity=39.4594594594595, Blast_Score=248, Evalue=9e-66, Organism=Caenorhabditis elegans, GI71995718, Length=376, Percent_Identity=36.7021276595745, Blast_Score=244, Evalue=7e-65, Organism=Caenorhabditis elegans, GI17510559, Length=426, Percent_Identity=33.0985915492958, Blast_Score=243, Evalue=3e-64, Organism=Caenorhabditis elegans, GI17552114, Length=374, Percent_Identity=33.4224598930481, Blast_Score=238, Evalue=9e-63, Organism=Caenorhabditis elegans, GI71982858, Length=354, Percent_Identity=33.0508474576271, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI17537549, Length=369, Percent_Identity=37.3983739837398, Blast_Score=229, Evalue=5e-60, Organism=Caenorhabditis elegans, GI17552642, Length=380, Percent_Identity=36.3157894736842, Blast_Score=228, Evalue=9e-60, Organism=Caenorhabditis elegans, GI115533224, Length=339, Percent_Identity=38.3480825958702, Blast_Score=226, Evalue=3e-59, Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=34.9462365591398, Blast_Score=220, Evalue=2e-57, Organism=Caenorhabditis elegans, GI115532548, Length=386, Percent_Identity=34.9740932642487, Blast_Score=218, Evalue=6e-57, Organism=Caenorhabditis elegans, GI17536099, Length=392, Percent_Identity=34.6938775510204, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17536101, Length=392, Percent_Identity=34.6938775510204, Blast_Score=216, Evalue=3e-56, Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=34.6774193548387, Blast_Score=216, Evalue=4e-56, Organism=Caenorhabditis elegans, GI17536103, Length=393, Percent_Identity=35.1145038167939, Blast_Score=215, Evalue=6e-56, Organism=Caenorhabditis elegans, GI115532546, Length=378, Percent_Identity=34.6560846560847, Blast_Score=214, Evalue=8e-56, Organism=Caenorhabditis elegans, GI17507945, Length=373, Percent_Identity=35.1206434316354, Blast_Score=210, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17507881, Length=373, Percent_Identity=34.8525469168901, Blast_Score=207, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71999644, Length=398, Percent_Identity=29.1457286432161, Blast_Score=205, Evalue=7e-53, Organism=Caenorhabditis elegans, GI71999646, Length=398, Percent_Identity=29.1457286432161, Blast_Score=204, Evalue=8e-53, Organism=Caenorhabditis elegans, GI17509811, Length=365, Percent_Identity=32.3287671232877, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17505370, Length=370, Percent_Identity=33.2432432432432, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI193206561, Length=344, Percent_Identity=31.1046511627907, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI193208216, Length=379, Percent_Identity=31.9261213720317, Blast_Score=184, Evalue=2e-46, Organism=Caenorhabditis elegans, GI17553716, Length=370, Percent_Identity=30.2702702702703, Blast_Score=182, Evalue=5e-46, Organism=Caenorhabditis elegans, GI71990816, Length=358, Percent_Identity=33.5195530726257, Blast_Score=177, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17508543, Length=390, Percent_Identity=27.6923076923077, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI25148203, Length=412, Percent_Identity=26.6990291262136, Blast_Score=165, Evalue=6e-41, Organism=Caenorhabditis elegans, GI17556951, Length=422, Percent_Identity=28.1990521327014, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI71982862, Length=207, Percent_Identity=33.3333333333333, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17507641, Length=488, Percent_Identity=27.4590163934426, Blast_Score=142, Evalue=6e-34, Organism=Caenorhabditis elegans, GI25148291, Length=360, Percent_Identity=28.3333333333333, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI32564046, Length=426, Percent_Identity=27.6995305164319, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI25148205, Length=337, Percent_Identity=24.0356083086053, Blast_Score=110, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71997889, Length=415, Percent_Identity=23.855421686747, Blast_Score=108, Evalue=8e-24, Organism=Caenorhabditis elegans, GI71987152, Length=112, Percent_Identity=41.9642857142857, Blast_Score=101, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6321856, Length=365, Percent_Identity=40.2739726027397, Blast_Score=268, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6320224, Length=369, Percent_Identity=36.0433604336043, Blast_Score=262, Evalue=1e-70, Organism=Saccharomyces cerevisiae, GI6325138, Length=382, Percent_Identity=37.696335078534, Blast_Score=254, Evalue=2e-68, Organism=Saccharomyces cerevisiae, GI6322912, Length=371, Percent_Identity=39.3530997304582, Blast_Score=251, Evalue=3e-67, Organism=Saccharomyces cerevisiae, GI6322323, Length=371, Percent_Identity=39.3530997304582, Blast_Score=251, Evalue=3e-67, Organism=Saccharomyces cerevisiae, GI6324217, Length=376, Percent_Identity=36.7021276595745, Blast_Score=244, Evalue=2e-65, Organism=Saccharomyces cerevisiae, GI6324778, Length=370, Percent_Identity=36.7567567567568, Blast_Score=243, Evalue=5e-65, Organism=Saccharomyces cerevisiae, GI6323021, Length=353, Percent_Identity=35.6940509915014, Blast_Score=239, Evalue=7e-64, Organism=Saccharomyces cerevisiae, GI6324620, Length=368, Percent_Identity=36.6847826086957, Blast_Score=234, Evalue=3e-62, Organism=Saccharomyces cerevisiae, GI6321360, Length=364, Percent_Identity=35.7142857142857, Blast_Score=234, Evalue=4e-62, Organism=Saccharomyces cerevisiae, GI6320041, Length=369, Percent_Identity=33.6043360433604, Blast_Score=231, Evalue=3e-61, Organism=Saccharomyces cerevisiae, GI6320119, Length=370, Percent_Identity=31.0810810810811, Blast_Score=214, Evalue=4e-56, Organism=Saccharomyces cerevisiae, GI6321963, Length=394, Percent_Identity=35.2791878172589, Blast_Score=211, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6323947, Length=411, Percent_Identity=31.6301703163017, Blast_Score=204, Evalue=3e-53, Organism=Saccharomyces cerevisiae, GI6319714, Length=378, Percent_Identity=30.4232804232804, Blast_Score=193, Evalue=8e-50, Organism=Saccharomyces cerevisiae, GI6320449, Length=360, Percent_Identity=33.8888888888889, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6321111, Length=363, Percent_Identity=32.7823691460055, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6322427, Length=383, Percent_Identity=30.2872062663185, Blast_Score=180, Evalue=5e-46, Organism=Saccharomyces cerevisiae, GI6320400, Length=532, Percent_Identity=26.5037593984962, Blast_Score=164, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6321267, Length=373, Percent_Identity=32.4396782841823, Blast_Score=161, Evalue=4e-40, Organism=Saccharomyces cerevisiae, GI6319618, Length=428, Percent_Identity=27.5700934579439, Blast_Score=150, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6322876, Length=424, Percent_Identity=29.2452830188679, Blast_Score=146, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6320173, Length=237, Percent_Identity=32.4894514767932, Blast_Score=146, Evalue=8e-36, Organism=Saccharomyces cerevisiae, GI6323306, Length=314, Percent_Identity=29.6178343949045, Blast_Score=134, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6324366, Length=356, Percent_Identity=25.561797752809, Blast_Score=106, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6321374, Length=405, Percent_Identity=21.9753086419753, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24645031, Length=371, Percent_Identity=38.2749326145553, Blast_Score=275, Evalue=9e-74, Organism=Drosophila melanogaster, GI24585582, Length=399, Percent_Identity=37.0927318295739, Blast_Score=272, Evalue=5e-73, Organism=Drosophila melanogaster, GI24584399, Length=352, Percent_Identity=38.3522727272727, Blast_Score=258, Evalue=7e-69, Organism=Drosophila melanogaster, GI24584994, Length=406, Percent_Identity=35.9605911330049, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI24582080, Length=365, Percent_Identity=38.6301369863014, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI24582078, Length=365, Percent_Identity=38.6301369863014, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI17136248, Length=365, Percent_Identity=38.6301369863014, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI24582075, Length=365, Percent_Identity=38.6301369863014, Blast_Score=250, Evalue=2e-66, Organism=Drosophila melanogaster, GI21355075, Length=367, Percent_Identity=37.0572207084469, Blast_Score=247, Evalue=2e-65, Organism=Drosophila melanogaster, GI24642151, Length=369, Percent_Identity=37.1273712737127, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI21356161, Length=410, Percent_Identity=34.390243902439, Blast_Score=243, Evalue=4e-64, Organism=Drosophila melanogaster, GI28574962, Length=382, Percent_Identity=36.3874345549738, Blast_Score=241, Evalue=1e-63, Organism=Drosophila melanogaster, GI17985987, Length=375, Percent_Identity=37.8666666666667, Blast_Score=240, Evalue=2e-63, Organism=Drosophila melanogaster, GI24662330, Length=369, Percent_Identity=38.2113821138211, Blast_Score=239, Evalue=5e-63, Organism=Drosophila melanogaster, GI24581954, Length=354, Percent_Identity=35.0282485875706, Blast_Score=236, Evalue=5e-62, Organism=Drosophila melanogaster, GI24581952, Length=354, Percent_Identity=35.0282485875706, Blast_Score=236, Evalue=5e-62, Organism=Drosophila melanogaster, GI24581956, Length=354, Percent_Identity=35.0282485875706, Blast_Score=236, Evalue=5e-62, Organism=Drosophila melanogaster, GI17136814, Length=378, Percent_Identity=37.3015873015873, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=32.6923076923077, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=32.6923076923077, Blast_Score=229, Evalue=4e-60, Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=34.733893557423, Blast_Score=227, Evalue=2e-59, Organism=Drosophila melanogaster, GI24644479, Length=380, Percent_Identity=35, Blast_Score=219, Evalue=5e-57, Organism=Drosophila melanogaster, GI18857967, Length=372, Percent_Identity=34.6774193548387, Blast_Score=219, Evalue=5e-57, Organism=Drosophila melanogaster, GI24644483, Length=380, Percent_Identity=35, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI281361218, Length=380, Percent_Identity=35, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI24644481, Length=380, Percent_Identity=35, Blast_Score=218, Evalue=7e-57, Organism=Drosophila melanogaster, GI24644487, Length=380, Percent_Identity=35, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI45551833, Length=380, Percent_Identity=35, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI24644485, Length=380, Percent_Identity=35, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI28575014, Length=348, Percent_Identity=31.6091954022989, Blast_Score=207, Evalue=2e-53, Organism=Drosophila melanogaster, GI28571808, Length=378, Percent_Identity=31.4814814814815, Blast_Score=202, Evalue=8e-52, Organism=Drosophila melanogaster, GI28571809, Length=378, Percent_Identity=31.4814814814815, Blast_Score=202, Evalue=8e-52, Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=35.7827476038339, Blast_Score=189, Evalue=4e-48, Organism=Drosophila melanogaster, GI17647335, Length=379, Percent_Identity=29.287598944591, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI21355559, Length=364, Percent_Identity=33.5164835164835, Blast_Score=176, Evalue=5e-44, Organism=Drosophila melanogaster, GI24642822, Length=458, Percent_Identity=29.2576419213974, Blast_Score=175, Evalue=9e-44, Organism=Drosophila melanogaster, GI24643725, Length=399, Percent_Identity=28.3208020050125, Blast_Score=172, Evalue=5e-43, Organism=Drosophila melanogaster, GI24666101, Length=346, Percent_Identity=33.2369942196532, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI24668515, Length=334, Percent_Identity=31.437125748503, Blast_Score=154, Evalue=2e-37, Organism=Drosophila melanogaster, GI19920478, Length=365, Percent_Identity=28.7671232876712, Blast_Score=149, Evalue=8e-36, Organism=Drosophila melanogaster, GI20130173, Length=336, Percent_Identity=29.1666666666667, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24640164, Length=368, Percent_Identity=25.8152173913043, Blast_Score=121, Evalue=2e-27, Organism=Drosophila melanogaster, GI28571338, Length=219, Percent_Identity=33.7899543378995, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI18859659, Length=219, Percent_Identity=33.7899543378995, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI17136666, Length=396, Percent_Identity=25.5050505050505, Blast_Score=107, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021046 - InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF12343 DEADboxA; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 69670; Mature: 69539
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNEKTFRELGLNESLVRALDDLGYEKPTPIQAASIEPLMANKDILGQAQTGTGKTGAF CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCHHCCCCCCCCCCCCCC ALPLLNSIDPNTNAPQILVLAPTRELAVQVAEAFASYAKYMKGLHVLPIYGGQSMQQQLN HHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH ALRRGPQIIVGTPGRVMDHMRRGTLKLDTLKAMVLDEADEMLKMGFIDDIEWILEHTPKT HHHCCCEEEEECCHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC RQLALFSATMPEQIKRVANKYLDNPVHVKIAATTSTVETIEQRFVQVSQHNKLEALVRVL CEEEEEHHCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHH EVEKTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAIDQLKRGQLDIII HHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE ATDVAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTHREMRMLRTI ECCHHHCCCCHHHHCHHEECCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHH ERATNSRIAPMDVPSPETVTERRLSRLGEQVAEIISQDLEFMKGAVATLCQQLEVDTDIL HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AAALLKQVQKDRPLQLHTMNERQRDSRDDRNSRDRDDRGSRDRNDRGPRDRSDRPRRESR HHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC PTPANLGAADSLKDNPDVKMCRYIIDVGRDNGVGVGNIVGAVANEANIDSRYIGQIQLFD CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHEEEEC QVTAIDLPDGMPKEVLQHLKKVRVCGRPLNIREAAGETFANTSGGDSRPPRRPRKPGGER CEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHCCCCCCCCCCCCCCCCCCCCC SGSDRGDRRPSGDRKPHRKGPKDAE CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSNEKTFRELGLNESLVRALDDLGYEKPTPIQAASIEPLMANKDILGQAQTGTGKTGAF CCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCHHCCCCCCCCCCCCCC ALPLLNSIDPNTNAPQILVLAPTRELAVQVAEAFASYAKYMKGLHVLPIYGGQSMQQQLN HHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH ALRRGPQIIVGTPGRVMDHMRRGTLKLDTLKAMVLDEADEMLKMGFIDDIEWILEHTPKT HHHCCCEEEEECCHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC RQLALFSATMPEQIKRVANKYLDNPVHVKIAATTSTVETIEQRFVQVSQHNKLEALVRVL CEEEEEHHCCHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHCCCHHHHHHHHH EVEKTEGIIIFVRTRNSCVELAEKLEARGYASSPLHGDMNQQARERAIDQLKRGQLDIII HHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEE ATDVAARGLDVERIGHVVNYDIPYDTEAYVHRIGRTGRAGRTGMAILFVTHREMRMLRTI ECCHHHCCCCHHHHCHHEECCCCCCCHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHH ERATNSRIAPMDVPSPETVTERRLSRLGEQVAEIISQDLEFMKGAVATLCQQLEVDTDIL HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AAALLKQVQKDRPLQLHTMNERQRDSRDDRNSRDRDDRGSRDRNDRGPRDRSDRPRRESR HHHHHHHHHHCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC PTPANLGAADSLKDNPDVKMCRYIIDVGRDNGVGVGNIVGAVANEANIDSRYIGQIQLFD CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHEEEEC QVTAIDLPDGMPKEVLQHLKKVRVCGRPLNIREAAGETFANTSGGDSRPPRRPRKPGGER CEEEEECCCCCHHHHHHHHHHHHHCCCCCCHHHHCCCHHCCCCCCCCCCCCCCCCCCCCC SGSDRGDRRPSGDRKPHRKGPKDAE CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8056751 [H]