Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is metJ [H]

Identifier: 167622561

GI number: 167622561

Start: 749421

End: 749735

Strand: Reverse

Name: metJ [H]

Synonym: Shal_0621

Alternate gene names: 167622561

Gene position: 749735-749421 (Counterclockwise)

Preceding gene: 167622568

Following gene: 167622560

Centisome position: 14.34

GC content: 44.13

Gene sequence:

>315_bases
ATGACTGAGTGGAATGGCGATTATATCAGCCCCTATGCTGAACACGGCAAAAAGAATGAACAAGTGAAAAAAATCACTGT
GTCCATTCCTTTGAAAGTACTTAAGGTGCTTACCGATGAGCGTACACGCCGCCAAGTAAATAACTTGCGTCACGCCACTA
ATAGTGAGCTGTTATGCGAAGCATTCTTGCATGCTTACACTGGCCAGCCACTACCAAACGATCAAGATCTTACCAAAGAT
AAACCCGACAGCATGCCTGCTGAGGTTAAGCGTTTGATGGATGAGATGGGTATTGAGTGGGATGAACTTGAATAA

Upstream 100 bases:

>100_bases
AGAAATCTATTTGCAATTGTCATAAATAAGAGGCAATAATTTGACTGCACAATTTAAAGGGTTAAAATCTGCCCCGAATT
TAGAAATAACAGGTGAGTCA

Downstream 100 bases:

>100_bases
TCTTCACCGATTATCAGTAAACATGATCTCCAGATAAGGACTGCTTAGCAGTCCTTATCTGTTTTTGGCCTAAATATGAG
ATCCGCTACCTCGTAGCAAG

Product: transcriptional repressor protein MetJ

Products: NA

Alternate protein names: Met regulon regulatory protein metJ [H]

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MTEWNGDYISPYAEHGKKNEQVKKITVSIPLKVLKVLTDERTRRQVNNLRHATNSELLCEAFLHAYTGQPLPNDQDLTKD
KPDSMPAEVKRLMDEMGIEWDELE

Sequences:

>Translated_104_residues
MTEWNGDYISPYAEHGKKNEQVKKITVSIPLKVLKVLTDERTRRQVNNLRHATNSELLCEAFLHAYTGQPLPNDQDLTKD
KPDSMPAEVKRLMDEMGIEWDELE
>Mature_103_residues
TEWNGDYISPYAEHGKKNEQVKKITVSIPLKVLKVLTDERTRRQVNNLRHATNSELLCEAFLHAYTGQPLPNDQDLTKDK
PDSMPAEVKRLMDEMGIEWDELE

Specific function: This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis [H]

COG id: COG3060

COG function: function code KE; Transcriptional regulator of met regulon

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metJ family [H]

Homologues:

Organism=Escherichia coli, GI1790373, Length=98, Percent_Identity=79.5918367346939, Blast_Score=170, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002084
- InterPro:   IPR010985
- ProDom:   PD020365 [H]

Pfam domain/function: PF01340 MetJ [H]

EC number: NA

Molecular weight: Translated: 12054; Mature: 11923

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEWNGDYISPYAEHGKKNEQVKKITVSIPLKVLKVLTDERTRRQVNNLRHATNSELLCE
CCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHH
AFLHAYTGQPLPNDQDLTKDKPDSMPAEVKRLMDEMGIEWDELE
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TEWNGDYISPYAEHGKKNEQVKKITVSIPLKVLKVLTDERTRRQVNNLRHATNSELLCE
CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHH
AFLHAYTGQPLPNDQDLTKDKPDSMPAEVKRLMDEMGIEWDELE
HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]