Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622540

Identifier: 167622540

GI number: 167622540

Start: 722773

End: 723177

Strand: Direct

Name: 167622540

Synonym: Shal_0600

Alternate gene names: NA

Gene position: 722773-723177 (Clockwise)

Preceding gene: 167622539

Following gene: 167622541

Centisome position: 13.83

GC content: 51.85

Gene sequence:

>405_bases
ATGGCAGCTCTGCTGATTGCCGTTGTACTCCTGCAGTTTGCAGGCGGCAACATCGGCGCGCACCAGTTGCATCTAGGAGA
TCACGAGGAGGAAAGTTCGTCGCATCCACATCTGCAGTTTACCGCCGAGGTTATCACCTTGAGCGAGTGCGTCGACTGTA
CCTGTTCACTGGATCCGCAAACGAGTGTGAGTGTCGATGAGCAAGCGCACGACCATACCGTTAGTAAAACCGAGTCTAAA
AATTTCGACCTTTGCTTAGACTGCCCTTGTCATGGCGGTTATGCGACCACTATGTCATTTGTTGCTATGGTGCCATCAGT
GCCCGTGAGTGATGAACTCAACAGCATCGATGCCCTGTATCTACCACCAGAACAACGTCCTGATTACCGCCCTCCAATCG
TTTAG

Upstream 100 bases:

>100_bases
TGATGCGGGTCATATTGGTTAGAATGTGTTAACACCAAGATTTTAAAACTAAATTTATAGGTGCGGCTTGCGTTTATTTA
CCCCTCAATCTCTATATAGA

Downstream 100 bases:

>100_bases
CCCTATCGGGGTTGAAGTTCGGTTTGGTGGTTGCTCACCTATGCCTCAGTGGCTCAAATAGCCTGACTTCCTCTTCGCTA
AATCTTTATCAAAAAACTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MAALLIAVVLLQFAGGNIGAHQLHLGDHEEESSSHPHLQFTAEVITLSECVDCTCSLDPQTSVSVDEQAHDHTVSKTESK
NFDLCLDCPCHGGYATTMSFVAMVPSVPVSDELNSIDALYLPPEQRPDYRPPIV

Sequences:

>Translated_134_residues
MAALLIAVVLLQFAGGNIGAHQLHLGDHEEESSSHPHLQFTAEVITLSECVDCTCSLDPQTSVSVDEQAHDHTVSKTESK
NFDLCLDCPCHGGYATTMSFVAMVPSVPVSDELNSIDALYLPPEQRPDYRPPIV
>Mature_133_residues
AALLIAVVLLQFAGGNIGAHQLHLGDHEEESSSHPHLQFTAEVITLSECVDCTCSLDPQTSVSVDEQAHDHTVSKTESKN
FDLCLDCPCHGGYATTMSFVAMVPSVPVSDELNSIDALYLPPEQRPDYRPPIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14503; Mature: 14372

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAALLIAVVLLQFAGGNIGAHQLHLGDHEEESSSHPHLQFTAEVITLSECVDCTCSLDPQ
CHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEHHHEEEHHHHCCCCCCCCCC
TSVSVDEQAHDHTVSKTESKNFDLCLDCPCHGGYATTMSFVAMVPSVPVSDELNSIDALY
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEE
LPPEQRPDYRPPIV
ECCCCCCCCCCCCC
>Mature Secondary Structure 
AALLIAVVLLQFAGGNIGAHQLHLGDHEEESSSHPHLQFTAEVITLSECVDCTCSLDPQ
HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEHHHEEEHHHHCCCCCCCCCC
TSVSVDEQAHDHTVSKTESKNFDLCLDCPCHGGYATTMSFVAMVPSVPVSDELNSIDALY
CCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEE
LPPEQRPDYRPPIV
ECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA