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The map label for this gene is yaeJ [H]

Identifier: 167622537

GI number: 167622537

Start: 721358

End: 721780

Strand: Reverse

Name: yaeJ [H]

Synonym: Shal_0597

Alternate gene names: 167622537

Gene position: 721780-721358 (Counterclockwise)

Preceding gene: 167622545

Following gene: 167622536

Centisome position: 13.81

GC content: 46.57

Gene sequence:

>423_bases
TTGGCAGCAATAAAAATATCAAACTCAGTATCGATTCAAGACAGCGAACTCGAGTGGCAATTCATCCGCTCCAGTGGCGC
AGGTGGCCAGCATCTCAATAAAGTATCGACGGCAGCGCAGCTGATCTTTGATATCAAAAGCTCCTCTCTACCCGAGTATT
ACCAGCAGCGTTTACTCGCCAAAGCCGATCACCGTATTACAAAAAGTGGCAAAATCATCATCAAGTGCCAACAGAGCCGC
AGCCAAGATTTTAATCGCCAAACGGCACTTGAACAGTTTATTGCACTGGTTGCGAGCGTAAGTGCCGTGCAGAAGAAACG
TATCGCCACCAAGCCAACTAAAGGTAGCCAACGTCGCCGTGTCGATACAAAAAAACAAAAAGGGGCGACTAAAGCGCTTA
GGCAAAATAAGTCCAATTTTTAG

Upstream 100 bases:

>100_bases
CCTTATTCTGGCTAAAAGTCTGTTAATATTGACCTAAGGCAATCTAAGACCGAGTGTGAACAGAATTTCAAAACACACTC
GCAATAGTGGATGTGAATTT

Downstream 100 bases:

>100_bases
CGCATCACTCGTACTCGATATGAGAAATACTCACAATTTTCACCTTTCGCTCTACAATGTTCGACAAGCAGCTGATTTTT
TGTTGAAATCAACGCTATAA

Product: peptidyl-tRNA hydrolase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAAIKISNSVSIQDSELEWQFIRSSGAGGQHLNKVSTAAQLIFDIKSSSLPEYYQQRLLAKADHRITKSGKIIIKCQQSR
SQDFNRQTALEQFIALVASVSAVQKKRIATKPTKGSQRRRVDTKKQKGATKALRQNKSNF

Sequences:

>Translated_140_residues
MAAIKISNSVSIQDSELEWQFIRSSGAGGQHLNKVSTAAQLIFDIKSSSLPEYYQQRLLAKADHRITKSGKIIIKCQQSR
SQDFNRQTALEQFIALVASVSAVQKKRIATKPTKGSQRRRVDTKKQKGATKALRQNKSNF
>Mature_139_residues
AAIKISNSVSIQDSELEWQFIRSSGAGGQHLNKVSTAAQLIFDIKSSSLPEYYQQRLLAKADHRITKSGKIIIKCQQSRS
QDFNRQTALEQFIALVASVSAVQKKRIATKPTKGSQRRRVDTKKQKGATKALRQNKSNF

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=131, Percent_Identity=50.381679389313, Blast_Score=140, Evalue=4e-35,
Organism=Drosophila melanogaster, GI19921098, Length=132, Percent_Identity=34.0909090909091, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15663; Mature: 15532

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAIKISNSVSIQDSELEWQFIRSSGAGGQHLNKVSTAAQLIFDIKSSSLPEYYQQRLLA
CCEEEECCCCEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KADHRITKSGKIIIKCQQSRSQDFNRQTALEQFIALVASVSAVQKKRIATKPTKGSQRRR
HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
VDTKKQKGATKALRQNKSNF
CCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AAIKISNSVSIQDSELEWQFIRSSGAGGQHLNKVSTAAQLIFDIKSSSLPEYYQQRLLA
CEEEECCCCEEECCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KADHRITKSGKIIIKCQQSRSQDFNRQTALEQFIALVASVSAVQKKRIATKPTKGSQRRR
HHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
VDTKKQKGATKALRQNKSNF
CCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]