| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is rbsA [H]
Identifier: 167622519
GI number: 167622519
Start: 695169
End: 696674
Strand: Direct
Name: rbsA [H]
Synonym: Shal_0579
Alternate gene names: 167622519
Gene position: 695169-696674 (Clockwise)
Preceding gene: 167622518
Following gene: 167622520
Centisome position: 13.3
GC content: 45.82
Gene sequence:
>1506_bases ATGACCCAAGCAATATTGCAGTTACAAGCGATTGAAAAGTCTTTCCCCGGGGTTAAAGCCCTAGATAAAGCTAGCTTAAA TGTTTATCCAGGCAAGGTGATGGCTTTGATGGGAGAAAACGGCGCTGGAAAATCGACATTAATGAAAGTACTCACCGGGA GCTATAACTTAGATGCTGGCCGTATCGTCTATCAAGGTAAGGCGCGCTCCTTCGATGGTCCGCGTGATTCACAGCAAGCT GGCATTAGCATTATCCATCAGGAACTCAATCTTCTGCCTGAGCTAACCATCGCCGAAAATATCTTCCTTGGGCGTGAAAT TACCTCGCGTTTTGGCCGCATACTTTGGGATGAAATGAATGCTCAAGCTGCGGCGTTATTAACACGCTTATCTGTATCTC ATGCACCGCAAACATTGCTTGGCAAGCTGAGTTTGGGCGAACAGCAGATGGTTGAAATTGCCAAAGCTATCTCGTTCGAC TCGAAAGTGATCATCATGGATGAACCCACCGACGCGCTCACCGATATTGAAACTCAATCGCTGTTTAAAGTGATTCATGA GTTACGTGAGCAAGGCTGCGGTATCGTTTATATCTCTCATCGTATGCAAGAGATCTTTACTATTTGTGATGCGGTGACAG TGCTTAGAGATGGTGGCTTTATTCATGAGTGTGCGATTAGCGACATTAATGAAGATCAGCTGATTGAGCGCATGGTGGGC CGTAAATTGGCAGAGCAATATCCGCGTATCGCCAATACACATCAGGGCTGTAGACTCGCCGTTAGCGAACTATCGGGACC TGGGGTTGAAAACGTCAGCTTTACCCTTAACCAAGGTGAAATATTAGGTTTTTCTGGACTAATGGGCGCAGGGCGCACTG AGTTGATGAAAATCATCTTTGGTGCTGGCGCTAAAACCCAGGGCCAGATAACGCTAAATGGCTGTGATATTAAGATCAAT AACCCACAGCAAGCACTTGATGCCGGTATTGCTTATATTTCTGAAGATCGCAAAGGCGATGGCTTACTGCTAGAGCTGTC GGTCAAAGAAAATATGTCTATTTGCGCATTAGCCAAGTTAAGTTCTGGGCTACAACTGCGCCACCGCGATGAAATGGCCG AAGTCGACCGTTTTATTGATGCCTTTAATATTAAAACTCCAAGCCGCGATGCCCGCATTGGTAACTTATCTGGCGGTAAT CAGCAAAAAGTGTCAATCGCCAAAGGCTTAATGACTCTGCCGCAGGTGCTTATTTTAGATGAGCCAACTCGTGGTGTGGA TGTGGGAGCGAAAAAAGAGATCTACGATCTTATCAACCGCTTCAAGGCTCAAGGCATGAGCATCATTTTAGTGTCATCGG ATATGCCTGAACTATTGGGGATGTCGGATCGTATTTTAGTTATGCACCAAGGCCAGATCAGTGGCGAATTTGATGCCGCC CAAGCAGATCAAGAAACTATTCTTGCTTGTGCAGTCGGTAAAACATTAAACAAGGATATTGCATGA
Upstream 100 bases:
>100_bases CTCACAATAGCCGCGCGGTGATCCGTACCGGTGAGTGTACGCCCTATGCCAATGTGATTTTTAAAACCGGTGTTGTATTT TAAGCTTATCGGAGTCACGT
Downstream 100 bases:
>100_bases GTCAGTCAATTACAGCGCAGCCATTTTATAAGCGTATTAACAAAGAGTGGTTGATTGAGCAAAAATCGCTTATAGCCCTG TTTAGTCTTATTTTTGTGGT
Product: D-ribose transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 501; Mature: 500
Protein sequence:
>501_residues MTQAILQLQAIEKSFPGVKALDKASLNVYPGKVMALMGENGAGKSTLMKVLTGSYNLDAGRIVYQGKARSFDGPRDSQQA GISIIHQELNLLPELTIAENIFLGREITSRFGRILWDEMNAQAAALLTRLSVSHAPQTLLGKLSLGEQQMVEIAKAISFD SKVIIMDEPTDALTDIETQSLFKVIHELREQGCGIVYISHRMQEIFTICDAVTVLRDGGFIHECAISDINEDQLIERMVG RKLAEQYPRIANTHQGCRLAVSELSGPGVENVSFTLNQGEILGFSGLMGAGRTELMKIIFGAGAKTQGQITLNGCDIKIN NPQQALDAGIAYISEDRKGDGLLLELSVKENMSICALAKLSSGLQLRHRDEMAEVDRFIDAFNIKTPSRDARIGNLSGGN QQKVSIAKGLMTLPQVLILDEPTRGVDVGAKKEIYDLINRFKAQGMSIILVSSDMPELLGMSDRILVMHQGQISGEFDAA QADQETILACAVGKTLNKDIA
Sequences:
>Translated_501_residues MTQAILQLQAIEKSFPGVKALDKASLNVYPGKVMALMGENGAGKSTLMKVLTGSYNLDAGRIVYQGKARSFDGPRDSQQA GISIIHQELNLLPELTIAENIFLGREITSRFGRILWDEMNAQAAALLTRLSVSHAPQTLLGKLSLGEQQMVEIAKAISFD SKVIIMDEPTDALTDIETQSLFKVIHELREQGCGIVYISHRMQEIFTICDAVTVLRDGGFIHECAISDINEDQLIERMVG RKLAEQYPRIANTHQGCRLAVSELSGPGVENVSFTLNQGEILGFSGLMGAGRTELMKIIFGAGAKTQGQITLNGCDIKIN NPQQALDAGIAYISEDRKGDGLLLELSVKENMSICALAKLSSGLQLRHRDEMAEVDRFIDAFNIKTPSRDARIGNLSGGN QQKVSIAKGLMTLPQVLILDEPTRGVDVGAKKEIYDLINRFKAQGMSIILVSSDMPELLGMSDRILVMHQGQISGEFDAA QADQETILACAVGKTLNKDIA >Mature_500_residues TQAILQLQAIEKSFPGVKALDKASLNVYPGKVMALMGENGAGKSTLMKVLTGSYNLDAGRIVYQGKARSFDGPRDSQQAG ISIIHQELNLLPELTIAENIFLGREITSRFGRILWDEMNAQAAALLTRLSVSHAPQTLLGKLSLGEQQMVEIAKAISFDS KVIIMDEPTDALTDIETQSLFKVIHELREQGCGIVYISHRMQEIFTICDAVTVLRDGGFIHECAISDINEDQLIERMVGR KLAEQYPRIANTHQGCRLAVSELSGPGVENVSFTLNQGEILGFSGLMGAGRTELMKIIFGAGAKTQGQITLNGCDIKINN PQQALDAGIAYISEDRKGDGLLLELSVKENMSICALAKLSSGLQLRHRDEMAEVDRFIDAFNIKTPSRDARIGNLSGGNQ QKVSIAKGLMTLPQVLILDEPTRGVDVGAKKEIYDLINRFKAQGMSIILVSSDMPELLGMSDRILVMHQGQISGEFDAAQ ADQETILACAVGKTLNKDIA
Specific function: Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system [H]
COG id: COG1129
COG function: function code G; ABC-type sugar transport system, ATPase component
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI105990541, Length=221, Percent_Identity=27.6018099547511, Blast_Score=89, Evalue=7e-18, Organism=Homo sapiens, GI11967971, Length=214, Percent_Identity=30.3738317757009, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI45446740, Length=206, Percent_Identity=30.0970873786408, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI47078218, Length=206, Percent_Identity=30.0970873786408, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI31657092, Length=205, Percent_Identity=25.3658536585366, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI27881501, Length=204, Percent_Identity=28.4313725490196, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI30795238, Length=204, Percent_Identity=28.4313725490196, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI21536376, Length=209, Percent_Identity=30.1435406698565, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI116734710, Length=206, Percent_Identity=28.1553398058252, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI27477115, Length=207, Percent_Identity=25.6038647342995, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI46592964, Length=208, Percent_Identity=28.8461538461538, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI6005701, Length=207, Percent_Identity=26.5700483091787, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI46592915, Length=208, Percent_Identity=28.8461538461538, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI153792144, Length=207, Percent_Identity=25.1207729468599, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI46592898, Length=208, Percent_Identity=28.8461538461538, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI46592971, Length=208, Percent_Identity=28.8461538461538, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI46592978, Length=208, Percent_Identity=28.8461538461538, Blast_Score=74, Evalue=3e-13, Organism=Homo sapiens, GI46592956, Length=208, Percent_Identity=28.8461538461538, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI42741659, Length=241, Percent_Identity=28.2157676348548, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI4505771, Length=240, Percent_Identity=29.1666666666667, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI9961252, Length=240, Percent_Identity=29.1666666666667, Blast_Score=74, Evalue=4e-13, Organism=Homo sapiens, GI9961250, Length=240, Percent_Identity=29.1666666666667, Blast_Score=74, Evalue=5e-13, Organism=Homo sapiens, GI27436953, Length=204, Percent_Identity=25, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI150417984, Length=221, Percent_Identity=24.4343891402715, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI9955963, Length=222, Percent_Identity=30.1801801801802, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI9955966, Length=195, Percent_Identity=29.7435897435897, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI45243524, Length=195, Percent_Identity=29.7435897435897, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI9955968, Length=195, Percent_Identity=29.7435897435897, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI21536378, Length=202, Percent_Identity=30.1980198019802, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI27262624, Length=256, Percent_Identity=25.390625, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI27262626, Length=256, Percent_Identity=25.390625, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI11967969, Length=210, Percent_Identity=28.0952380952381, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI255708477, Length=215, Percent_Identity=30.2325581395349, Blast_Score=70, Evalue=4e-12, Organism=Homo sapiens, GI215820660, Length=200, Percent_Identity=30, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI20143975, Length=200, Percent_Identity=30, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI148612844, Length=234, Percent_Identity=24.7863247863248, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI156105685, Length=212, Percent_Identity=25, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1790190, Length=497, Percent_Identity=64.989939637827, Blast_Score=650, Evalue=0.0, Organism=Escherichia coli, GI1788472, Length=493, Percent_Identity=44.421906693712, Blast_Score=425, Evalue=1e-120, Organism=Escherichia coli, GI1788210, Length=493, Percent_Identity=43.4077079107505, Blast_Score=398, Evalue=1e-112, Organism=Escherichia coli, GI1789991, Length=500, Percent_Identity=42.8, Blast_Score=390, Evalue=1e-110, Organism=Escherichia coli, GI1790525, Length=488, Percent_Identity=40.1639344262295, Blast_Score=358, Evalue=1e-100, Organism=Escherichia coli, GI48995001, Length=491, Percent_Identity=38.2892057026477, Blast_Score=339, Evalue=2e-94, Organism=Escherichia coli, GI1787792, Length=507, Percent_Identity=38.0670611439842, Blast_Score=309, Evalue=2e-85, Organism=Escherichia coli, GI1788897, Length=476, Percent_Identity=36.9747899159664, Blast_Score=303, Evalue=2e-83, Organism=Escherichia coli, GI145693107, Length=527, Percent_Identity=25.9962049335863, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI48994943, Length=494, Percent_Identity=25.5060728744939, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI1789593, Length=235, Percent_Identity=25.531914893617, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI87082268, Length=206, Percent_Identity=29.6116504854369, Blast_Score=99, Evalue=8e-22, Organism=Escherichia coli, GI1788506, Length=529, Percent_Identity=22.6843100189036, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI1789864, Length=233, Percent_Identity=28.3261802575107, Blast_Score=95, Evalue=8e-21, Organism=Escherichia coli, GI1790544, Length=246, Percent_Identity=27.6422764227642, Blast_Score=95, Evalue=1e-20, Organism=Escherichia coli, GI1787759, Length=248, Percent_Identity=32.6612903225806, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1787105, Length=238, Percent_Identity=29.8319327731092, Blast_Score=94, Evalue=3e-20, Organism=Escherichia coli, GI1788761, Length=214, Percent_Identity=26.6355140186916, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1786398, Length=232, Percent_Identity=28.448275862069, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI87081782, Length=264, Percent_Identity=29.1666666666667, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1788165, Length=214, Percent_Identity=30.8411214953271, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI87081791, Length=218, Percent_Identity=26.605504587156, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI87081709, Length=208, Percent_Identity=27.8846153846154, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1788225, Length=254, Percent_Identity=26.3779527559055, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1787089, Length=235, Percent_Identity=29.3617021276596, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1789672, Length=225, Percent_Identity=26.6666666666667, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI1787029, Length=201, Percent_Identity=27.8606965174129, Blast_Score=86, Evalue=7e-18, Organism=Escherichia coli, GI1787370, Length=231, Percent_Identity=25.1082251082251, Blast_Score=85, Evalue=9e-18, Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=28.5714285714286, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI48994883, Length=226, Percent_Identity=29.646017699115, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1789873, Length=209, Percent_Identity=29.1866028708134, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1786319, Length=236, Percent_Identity=27.5423728813559, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI48994997, Length=212, Percent_Identity=29.2452830188679, Blast_Score=82, Evalue=9e-17, Organism=Escherichia coli, GI1790467, Length=216, Percent_Identity=25.462962962963, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1786975, Length=482, Percent_Identity=24.0663900414938, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790739, Length=261, Percent_Identity=27.2030651340996, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787143, Length=235, Percent_Identity=28.0851063829787, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1787712, Length=220, Percent_Identity=25, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1786345, Length=239, Percent_Identity=27.6150627615063, Blast_Score=79, Evalue=6e-16, Organism=Escherichia coli, GI1790534, Length=215, Percent_Identity=29.7674418604651, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1789891, Length=208, Percent_Identity=25.4807692307692, Blast_Score=75, Evalue=7e-15, Organism=Escherichia coli, GI1789962, Length=215, Percent_Identity=27.4418604651163, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788450, Length=223, Percent_Identity=27.3542600896861, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1787758, Length=219, Percent_Identity=26.027397260274, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786253, Length=197, Percent_Identity=26.9035532994924, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1786698, Length=213, Percent_Identity=24.4131455399061, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1787500, Length=213, Percent_Identity=26.7605633802817, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1786563, Length=209, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1789032, Length=226, Percent_Identity=25.2212389380531, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1786654, Length=199, Percent_Identity=30.6532663316583, Blast_Score=72, Evalue=8e-14, Organism=Escherichia coli, GI1786872, Length=235, Percent_Identity=25.9574468085106, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI87082267, Length=219, Percent_Identity=26.4840182648402, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1787164, Length=216, Percent_Identity=25.462962962963, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1789963, Length=225, Percent_Identity=27.1111111111111, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1790162, Length=238, Percent_Identity=24.7899159663866, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1786703, Length=206, Percent_Identity=29.126213592233, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1786653, Length=230, Percent_Identity=26.9565217391304, Blast_Score=65, Evalue=8e-12, Organism=Escherichia coli, GI1786803, Length=214, Percent_Identity=25.7009345794392, Blast_Score=63, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115533608, Length=212, Percent_Identity=28.7735849056604, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17565586, Length=230, Percent_Identity=28.2608695652174, Blast_Score=91, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17510237, Length=207, Percent_Identity=28.9855072463768, Blast_Score=82, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17558664, Length=223, Percent_Identity=30.4932735426009, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI193208177, Length=216, Percent_Identity=24.537037037037, Blast_Score=76, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71996550, Length=211, Percent_Identity=32.7014218009479, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17541710, Length=217, Percent_Identity=28.110599078341, Blast_Score=73, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71983523, Length=248, Percent_Identity=24.1935483870968, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17569145, Length=242, Percent_Identity=32.2314049586777, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71983510, Length=213, Percent_Identity=25.3521126760563, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17567265, Length=193, Percent_Identity=31.0880829015544, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71983516, Length=213, Percent_Identity=25.3521126760563, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI71984940, Length=205, Percent_Identity=32.1951219512195, Blast_Score=70, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193209708, Length=234, Percent_Identity=29.9145299145299, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI193202349, Length=245, Percent_Identity=27.7551020408163, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI193202878, Length=104, Percent_Identity=34.6153846153846, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI212646699, Length=212, Percent_Identity=28.7735849056604, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17539902, Length=214, Percent_Identity=26.1682242990654, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17569143, Length=241, Percent_Identity=30.7053941908714, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17538654, Length=239, Percent_Identity=25.9414225941423, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115534520, Length=225, Percent_Identity=24, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17567269, Length=210, Percent_Identity=28.5714285714286, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193211015, Length=194, Percent_Identity=29.8969072164948, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI193211017, Length=194, Percent_Identity=29.8969072164948, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71996809, Length=194, Percent_Identity=29.8969072164948, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6323959, Length=214, Percent_Identity=31.3084112149533, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6322640, Length=230, Percent_Identity=27.3913043478261, Blast_Score=66, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324498, Length=198, Percent_Identity=28.7878787878788, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6319856, Length=229, Percent_Identity=28.3842794759825, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI221512771, Length=218, Percent_Identity=28.4403669724771, Blast_Score=89, Evalue=1e-17, Organism=Drosophila melanogaster, GI24666092, Length=230, Percent_Identity=30, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI24643674, Length=219, Percent_Identity=26.9406392694064, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI221500365, Length=219, Percent_Identity=27.3972602739726, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI116007184, Length=219, Percent_Identity=27.3972602739726, Blast_Score=79, Evalue=8e-15, Organism=Drosophila melanogaster, GI17136592, Length=215, Percent_Identity=27.4418604651163, Blast_Score=78, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574744, Length=198, Percent_Identity=29.2929292929293, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI28574150, Length=209, Percent_Identity=25.8373205741627, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI116007328, Length=209, Percent_Identity=25.8373205741627, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI28573573, Length=206, Percent_Identity=25.7281553398058, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI28573571, Length=206, Percent_Identity=25.7281553398058, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI24653245, Length=214, Percent_Identity=30.3738317757009, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI281363262, Length=214, Percent_Identity=30.3738317757009, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI21357907, Length=208, Percent_Identity=28.3653846153846, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI85724864, Length=208, Percent_Identity=28.3653846153846, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI24580555, Length=208, Percent_Identity=28.3653846153846, Blast_Score=73, Evalue=6e-13, Organism=Drosophila melanogaster, GI85816269, Length=208, Percent_Identity=28.3653846153846, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI24580553, Length=208, Percent_Identity=28.3653846153846, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI28574533, Length=199, Percent_Identity=29.1457286432161, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24582014, Length=220, Percent_Identity=26.3636363636364, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI24582012, Length=220, Percent_Identity=26.3636363636364, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI17136662, Length=213, Percent_Identity=28.6384976525822, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI24659289, Length=202, Percent_Identity=29.7029702970297, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI28571209, Length=218, Percent_Identity=24.7706422018349, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI85726357, Length=210, Percent_Identity=29.0476190476191, Blast_Score=70, Evalue=4e-12, Organism=Drosophila melanogaster, GI221500419, Length=209, Percent_Identity=23.444976076555, Blast_Score=68, Evalue=1e-11, Organism=Drosophila melanogaster, GI161076682, Length=213, Percent_Identity=30.9859154929577, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI161076684, Length=211, Percent_Identity=28.9099526066351, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24581617, Length=211, Percent_Identity=28.9099526066351, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24581615, Length=211, Percent_Identity=28.9099526066351, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI19920532, Length=223, Percent_Identity=27.8026905829596, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI24580930, Length=223, Percent_Identity=27.8026905829596, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI24581191, Length=175, Percent_Identity=29.1428571428571, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI24581189, Length=175, Percent_Identity=29.1428571428571, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI24581193, Length=175, Percent_Identity=29.1428571428571, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI24581195, Length=175, Percent_Identity=29.1428571428571, Blast_Score=66, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015861 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: =3.6.3.17 [H]
Molecular weight: Translated: 54488; Mature: 54356
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQAILQLQAIEKSFPGVKALDKASLNVYPGKVMALMGENGAGKSTLMKVLTGSYNLDAG CCHHHHHHHHHHHCCCCCHHHCCCCCEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCC RIVYQGKARSFDGPRDSQQAGISIIHQELNLLPELTIAENIFLGREITSRFGRILWDEMN EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC AQAAALLTRLSVSHAPQTLLGKLSLGEQQMVEIAKAISFDSKVIIMDEPTDALTDIETQS HHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCHHH LFKVIHELREQGCGIVYISHRMQEIFTICDAVTVLRDGGFIHECAISDINEDQLIERMVG HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHH RKLAEQYPRIANTHQGCRLAVSELSGPGVENVSFTLNQGEILGFSGLMGAGRTELMKIIF HHHHHHCCHHCCCCCCHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHH GAGAKTQGQITLNGCDIKINNPQQALDAGIAYISEDRKGDGLLLELSVKENMSICALAKL CCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCEEEHHHH SSGLQLRHRDEMAEVDRFIDAFNIKTPSRDARIGNLSGGNQQKVSIAKGLMTLPQVLILD CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCEEEEC EPTRGVDVGAKKEIYDLINRFKAQGMSIILVSSDMPELLGMSDRILVMHQGQISGEFDAA CCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHCCCCCEEEEECCCCCCCCCCC QADQETILACAVGKTLNKDIA CCCHHHEEHHHHCCHHCCCCC >Mature Secondary Structure TQAILQLQAIEKSFPGVKALDKASLNVYPGKVMALMGENGAGKSTLMKVLTGSYNLDAG CHHHHHHHHHHHCCCCCHHHCCCCCEECCCEEEEEECCCCCCHHHHHHHHHCCCCCCCC RIVYQGKARSFDGPRDSQQAGISIIHQELNLLPELTIAENIFLGREITSRFGRILWDEMN EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC AQAAALLTRLSVSHAPQTLLGKLSLGEQQMVEIAKAISFDSKVIIMDEPTDALTDIETQS HHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCHHH LFKVIHELREQGCGIVYISHRMQEIFTICDAVTVLRDGGFIHECAISDINEDQLIERMVG HHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHHHH RKLAEQYPRIANTHQGCRLAVSELSGPGVENVSFTLNQGEILGFSGLMGAGRTELMKIIF HHHHHHCCHHCCCCCCHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCCCCHHHHHHHHH GAGAKTQGQITLNGCDIKINNPQQALDAGIAYISEDRKGDGLLLELSVKENMSICALAKL CCCCCCCCEEEEEEEEEEECCHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCEEEHHHH SSGLQLRHRDEMAEVDRFIDAFNIKTPSRDARIGNLSGGNQQKVSIAKGLMTLPQVLILD CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCHHHHHHHHHHCCCEEEEC EPTRGVDVGAKKEIYDLINRFKAQGMSIILVSSDMPELLGMSDRILVMHQGQISGEFDAA CCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCHHHHCCCCCEEEEECCCCCCCCCCC QADQETILACAVGKTLNKDIA CCCHHHEEHHHHCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]