Click here to switch to the map view.

The map label for this gene is 167622507

Identifier: 167622507

GI number: 167622507

Start: 682834

End: 684864

Strand: Direct

Name: 167622507

Synonym: Shal_0567

Alternate gene names: NA

Gene position: 682834-684864 (Clockwise)

Preceding gene: 167622506

Following gene: 167622508

Centisome position: 13.06

GC content: 44.95

Gene sequence:

>2031_bases
ATGAGACGCTGGAAACACAAGGTAGCATTAAGCGTGCTGTTTTGTTTTGGTGCCATTGCCAATGCGAACGCTGCTGGAAA
GTACGATAGCATCCCTCAAATGGGAAAAACGGCTAAAGAGTCGATAGCTAACTATCAAGGAACAGAACAGATCAACGGCG
TTAAAACGCTGCAAGATTATATTGTACAAGAGGATGAATTATTCGATTTCCTATTCGAAAACCATCCAATGTTTAAATAC
CAGCAATCTGGAAACTTAGTGGGTGATTACCACATCAGTGACCGTGGTGAAGAGTATTTAGATACGGGCCACAGCCCTGC
ATATAGTAAAGGTGTTGGTAAGCCTCGTGCGGTGCAGTACCGCCTAGGTGCTAAATCTATCTTAGATTATCCAAACAACT
TCGTTGGTCCTGAGAAGTGTGCTGAATGTCATGCGACTCAATATGAAAAGTGGCAGCGCTCGCGTCATGCTAAAACAATT
CGTTTCCCTGGCGAACACCCAGAAGTGGATAACGACATTGAAAAAACCATGTACAACACTAAAGATACCTCAATCTTACC
TGACGGCATTACGCCAGATGCTATCTATGCAACTGTTGGTACACCGCGTACCAAATATGGTTTCATCGATTCTTGGTTAG
TACGTGGTACTTATCATATTGAAGGCGGTCTATTACGCGACGGCACAGGCAAGATGGTTGCTGGTGCTAACCAGTTCTCT
CGTGGTTGGGCTGAATGGCTAACCCCTGAGATGTCTAAGAAAATTAACGATGTTATACCTGACTTCCCAATAACTCTAGA
AGGTTTTGGTGCGTCTGGTTCTCATCAGCAAGGCATGAGTTCATACGGTGCTAAATATCGTACAGAAATGCTTTTCCAAC
CAGCAAGCTCTTACTGTGAAATCTGTCATACGTTTAAGTTTGACTTCCAGAGTAAGGAAGAATTCTTTGATGCCTTAGGC
GATCCGAAGAAACTTCAAGAGCACACGATTTCTCGTGGTATTGCTTGTGAAGAGTGTCATGGCGCAGGTGGTCACTTAGA
TGGTGGTACTGGCGGCATGCAGTCTAACTGTGAACGTTGTCACCAGCGTTTCCAGTATGACCCAACTCTTCAAGATACAC
CTGAAGCACAAGAGAAAGGCGAGTATGCCTTTGGTGTGAAGATGAAGTCTCTATGTCCATCATGTGGTACTGAAGGTTCT
CAGATGTATAACTCTGAGCACTACGAGAAGGGCATGCGTTGTACTACATGTCACGATCCGCACGAAGTGACTGACGGCTC
TTGGATGTCTGGTTTTACTACACCAAAGCTTAAGAAAGACTGTAAAGACTGTCATGAAGCGCAAACACTGATTGCTGAGA
ACTCAGATACTCACAACCAGCAAACTTGTCAAAGCTGTCACATGCCTAACATGGGTAGCTGTGAAAACTTCAAGGCATTG
CAGTTCCCTGACCAAGCTGGATTTGACGCGGTACGTAAGTCTCACATGTGGAAGATTGAAGTCGACCCAACTCTGAAGAC
GTTGAACCCGCCTGAAGGTGAGTCTCGTGCTGGTGGCCCAAGCGGTGTTAAAGGTTGGACTGTTGCTAAGAACGAAGAAG
GTCGCTCATACCTCGACTTAATGTGGTCTTGTGCTCGTACCTCAATCTCTGACCACGATGTGGTAGAGAACAAGGGTTGT
CACAGCCAGTTCCAGTCTGAGCTTGAGAAAGGTCTACATTACGAAGATCAGTTAGAGATCTACGGCGAAGTAATGAAGAT
GCAAACTCCAGTTAAGGAAGTTTTCACCAAAGTTGAACAAGCTCTTGTACGTATCGATCAGCTATTAGAAGTCACTAAGT
TGTCTGTTGAAGACAAGACTCAAGTGCTAATGCTAGCAGAGAAGGCACAAGAGACTGTTGATCTAATTAAGAAAGATGGT
TCTTGGGGTGTTCACGGTTTCCGTTATAGCCAGAAGCGCCTAGATGCTGCACTTACGTATGTTACGCAAGCGCAAAACAT
TCTAGATGGAACAGGTTACGCAGCTAAGTAA

Upstream 100 bases:

>100_bases
TGTTTAGCTCAATCGGTGAACGGTTAGATTTAAAAAAGTGTGTTTTAGAAACATGCTAAAAACAGTGAAAAAAATAAAAT
AATATAAGTAGGAGTGAATG

Downstream 100 bases:

>100_bases
GCCGCCTAACTTAACCGCCTCGGCATGCATTGCACTGCGATAATTGCCGAGGCAATAGAGAGAAAGATTATGAAAAAAGC
ACTTGGTCAAATTCTTGTAA

Product: cytochrome c

Products: NA

Alternate protein names: tRNA Synthetase Class II; Cytochrome C Family Protein

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MRRWKHKVALSVLFCFGAIANANAAGKYDSIPQMGKTAKESIANYQGTEQINGVKTLQDYIVQEDELFDFLFENHPMFKY
QQSGNLVGDYHISDRGEEYLDTGHSPAYSKGVGKPRAVQYRLGAKSILDYPNNFVGPEKCAECHATQYEKWQRSRHAKTI
RFPGEHPEVDNDIEKTMYNTKDTSILPDGITPDAIYATVGTPRTKYGFIDSWLVRGTYHIEGGLLRDGTGKMVAGANQFS
RGWAEWLTPEMSKKINDVIPDFPITLEGFGASGSHQQGMSSYGAKYRTEMLFQPASSYCEICHTFKFDFQSKEEFFDALG
DPKKLQEHTISRGIACEECHGAGGHLDGGTGGMQSNCERCHQRFQYDPTLQDTPEAQEKGEYAFGVKMKSLCPSCGTEGS
QMYNSEHYEKGMRCTTCHDPHEVTDGSWMSGFTTPKLKKDCKDCHEAQTLIAENSDTHNQQTCQSCHMPNMGSCENFKAL
QFPDQAGFDAVRKSHMWKIEVDPTLKTLNPPEGESRAGGPSGVKGWTVAKNEEGRSYLDLMWSCARTSISDHDVVENKGC
HSQFQSELEKGLHYEDQLEIYGEVMKMQTPVKEVFTKVEQALVRIDQLLEVTKLSVEDKTQVLMLAEKAQETVDLIKKDG
SWGVHGFRYSQKRLDAALTYVTQAQNILDGTGYAAK

Sequences:

>Translated_676_residues
MRRWKHKVALSVLFCFGAIANANAAGKYDSIPQMGKTAKESIANYQGTEQINGVKTLQDYIVQEDELFDFLFENHPMFKY
QQSGNLVGDYHISDRGEEYLDTGHSPAYSKGVGKPRAVQYRLGAKSILDYPNNFVGPEKCAECHATQYEKWQRSRHAKTI
RFPGEHPEVDNDIEKTMYNTKDTSILPDGITPDAIYATVGTPRTKYGFIDSWLVRGTYHIEGGLLRDGTGKMVAGANQFS
RGWAEWLTPEMSKKINDVIPDFPITLEGFGASGSHQQGMSSYGAKYRTEMLFQPASSYCEICHTFKFDFQSKEEFFDALG
DPKKLQEHTISRGIACEECHGAGGHLDGGTGGMQSNCERCHQRFQYDPTLQDTPEAQEKGEYAFGVKMKSLCPSCGTEGS
QMYNSEHYEKGMRCTTCHDPHEVTDGSWMSGFTTPKLKKDCKDCHEAQTLIAENSDTHNQQTCQSCHMPNMGSCENFKAL
QFPDQAGFDAVRKSHMWKIEVDPTLKTLNPPEGESRAGGPSGVKGWTVAKNEEGRSYLDLMWSCARTSISDHDVVENKGC
HSQFQSELEKGLHYEDQLEIYGEVMKMQTPVKEVFTKVEQALVRIDQLLEVTKLSVEDKTQVLMLAEKAQETVDLIKKDG
SWGVHGFRYSQKRLDAALTYVTQAQNILDGTGYAAK
>Mature_676_residues
MRRWKHKVALSVLFCFGAIANANAAGKYDSIPQMGKTAKESIANYQGTEQINGVKTLQDYIVQEDELFDFLFENHPMFKY
QQSGNLVGDYHISDRGEEYLDTGHSPAYSKGVGKPRAVQYRLGAKSILDYPNNFVGPEKCAECHATQYEKWQRSRHAKTI
RFPGEHPEVDNDIEKTMYNTKDTSILPDGITPDAIYATVGTPRTKYGFIDSWLVRGTYHIEGGLLRDGTGKMVAGANQFS
RGWAEWLTPEMSKKINDVIPDFPITLEGFGASGSHQQGMSSYGAKYRTEMLFQPASSYCEICHTFKFDFQSKEEFFDALG
DPKKLQEHTISRGIACEECHGAGGHLDGGTGGMQSNCERCHQRFQYDPTLQDTPEAQEKGEYAFGVKMKSLCPSCGTEGS
QMYNSEHYEKGMRCTTCHDPHEVTDGSWMSGFTTPKLKKDCKDCHEAQTLIAENSDTHNQQTCQSCHMPNMGSCENFKAL
QFPDQAGFDAVRKSHMWKIEVDPTLKTLNPPEGESRAGGPSGVKGWTVAKNEEGRSYLDLMWSCARTSISDHDVVENKGC
HSQFQSELEKGLHYEDQLEIYGEVMKMQTPVKEVFTKVEQALVRIDQLLEVTKLSVEDKTQVLMLAEKAQETVDLIKKDG
SWGVHGFRYSQKRLDAALTYVTQAQNILDGTGYAAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75789; Mature: 75789

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: PS51008 MULTIHEME_CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWKHKVALSVLFCFGAIANANAAGKYDSIPQMGKTAKESIANYQGTEQINGVKTLQDY
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IVQEDELFDFLFENHPMFKYQQSGNLVGDYHISDRGEEYLDTGHSPAYSKGVGKPRAVQY
HCCHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCHHHHHCCCCCCHHHCCCCCCEEEE
RLGAKSILDYPNNFVGPEKCAECHATQYEKWQRSRHAKTIRFPGEHPEVDNDIEKTMYNT
ECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCC
KDTSILPDGITPDAIYATVGTPRTKYGFIDSWLVRGTYHIEGGLLRDGTGKMVAGANQFS
CCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCEEEECCCEEECCCCCEEECCCHHH
RGWAEWLTPEMSKKINDVIPDFPITLEGFGASGSHQQGMSSYGAKYRTEMLFQPASSYCE
HHHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCHHHHHHHHHCCHHHHHH
ICHTFKFDFQSKEEFFDALGDPKKLQEHTISRGIACEECHGAGGHLDGGTGGMQSNCERC
HHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHH
HQRFQYDPTLQDTPEAQEKGEYAFGVKMKSLCPSCGTEGSQMYNSEHYEKGMRCTTCHDP
HHHCCCCCCCCCCCCHHHCCCEEECEEHHHHCCCCCCCCHHHHCCHHHHCCCEEECCCCC
HEVTDGSWMSGFTTPKLKKDCKDCHEAQTLIAENSDTHNQQTCQSCHMPNMGSCENFKAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCEE
QFPDQAGFDAVRKSHMWKIEVDPTLKTLNPPEGESRAGGPSGVKGWTVAKNEEGRSYLDL
CCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHH
MWSCARTSISDHDVVENKGCHSQFQSELEKGLHYEDQLEIYGEVMKMQTPVKEVFTKVEQ
HHHHHHCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
ALVRIDQLLEVTKLSVEDKTQVLMLAEKAQETVDLIKKDGSWGVHGFRYSQKRLDAALTY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VTQAQNILDGTGYAAK
HHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRRWKHKVALSVLFCFGAIANANAAGKYDSIPQMGKTAKESIANYQGTEQINGVKTLQDY
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
IVQEDELFDFLFENHPMFKYQQSGNLVGDYHISDRGEEYLDTGHSPAYSKGVGKPRAVQY
HCCHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCHHHHHCCCCCCHHHCCCCCCEEEE
RLGAKSILDYPNNFVGPEKCAECHATQYEKWQRSRHAKTIRFPGEHPEVDNDIEKTMYNT
ECCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHCCC
KDTSILPDGITPDAIYATVGTPRTKYGFIDSWLVRGTYHIEGGLLRDGTGKMVAGANQFS
CCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCEEEECCCEEECCCCCEEECCCHHH
RGWAEWLTPEMSKKINDVIPDFPITLEGFGASGSHQQGMSSYGAKYRTEMLFQPASSYCE
HHHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCHHHHHHHHHCCHHHHHH
ICHTFKFDFQSKEEFFDALGDPKKLQEHTISRGIACEECHGAGGHLDGGTGGMQSNCERC
HHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHH
HQRFQYDPTLQDTPEAQEKGEYAFGVKMKSLCPSCGTEGSQMYNSEHYEKGMRCTTCHDP
HHHCCCCCCCCCCCCHHHCCCEEECEEHHHHCCCCCCCCHHHHCCHHHHCCCEEECCCCC
HEVTDGSWMSGFTTPKLKKDCKDCHEAQTLIAENSDTHNQQTCQSCHMPNMGSCENFKAL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCEE
QFPDQAGFDAVRKSHMWKIEVDPTLKTLNPPEGESRAGGPSGVKGWTVAKNEEGRSYLDL
CCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHH
MWSCARTSISDHDVVENKGCHSQFQSELEKGLHYEDQLEIYGEVMKMQTPVKEVFTKVEQ
HHHHHHCCCCCCHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHH
ALVRIDQLLEVTKLSVEDKTQVLMLAEKAQETVDLIKKDGSWGVHGFRYSQKRLDAALTY
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
VTQAQNILDGTGYAAK
HHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA