| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622497
Identifier: 167622497
GI number: 167622497
Start: 670161
End: 670649
Strand: Direct
Name: 167622497
Synonym: Shal_0557
Alternate gene names: NA
Gene position: 670161-670649 (Clockwise)
Preceding gene: 167622496
Following gene: 167622498
Centisome position: 12.82
GC content: 48.67
Gene sequence:
>489_bases ATGAAAAAGTTAATCTGTTTACTATTCCTTTTACCTCTAATGAGTGCGTGTAGCGATAGCAGCGCGGATGCAACGCAATA CACGGCCCAGGCCATTCATGAACATGACCGTTGCCACCTGTGCGGCATGATGATCACTAAGTATCCAGGGCCTAAGGGGC AAGTTCACCTAAAAGAACAGTCGATAGTGCCCAAGTTCTGCTCGACACGCGATATGTTTAACTTCGCACTGCAGAGCGAG AACAAACGCCAAATCGAAGCGCTCTTTGTCCATGACGTAGCAGCTACAGATTGGGAACAACCTAAAGATGACGCCTTTAC CGATGCAACCCAGGCTTGGTATGTCTACGGCAGCATTAAAAAAGCGGTAATGGGTCCAGCGGTGGCCAGCTTTAAGAATA AAGCCGATGCGGTTAAGTTTGCTCAGGAGTTTGGCGGCGCCGTTCTCCCATATGAAAAAATTGATATCGCCCTGTTAGCG GGCGAATAG
Upstream 100 bases:
>100_bases TCCTGAATTTCGCTAGCTGTGAGTAAGCTAGCCCTTCAATGTCGCCCCTGCAAGGCTATTGAAGGGGTAGCCTGAAAGCA TATTTGATTCTGGAAATACA
Downstream 100 bases:
>100_bases TTGTAGGTGAGTGGTTACTTACCATGGTTGCTTACAATGGTTAGTTACTAAATTATGAAGAAACTCATGAAAAATTGTGG CTCAGAGCTGGCGCGTAACA
Product: NosL family protein
Products: NA
Alternate protein names: NosL Protein; Protein Disulfide Isomerase NosL; Lipoprotein Involved In Nitrous Oxide Reduction; Nitrous Oxide Reductase Accessory Protein NosL; Nitrous Oxide Reductase Accessory Protein; NosL Lipoprotein; Lipoprotein; Protein Disulfide Isomerase NosL Family Protein; Nosl Family Protein; NosL Copper Chaperone; NosL Protein Required For Nitrous Oxide Reduction
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKKLICLLFLLPLMSACSDSSADATQYTAQAIHEHDRCHLCGMMITKYPGPKGQVHLKEQSIVPKFCSTRDMFNFALQSE NKRQIEALFVHDVAATDWEQPKDDAFTDATQAWYVYGSIKKAVMGPAVASFKNKADAVKFAQEFGGAVLPYEKIDIALLA GE
Sequences:
>Translated_162_residues MKKLICLLFLLPLMSACSDSSADATQYTAQAIHEHDRCHLCGMMITKYPGPKGQVHLKEQSIVPKFCSTRDMFNFALQSE NKRQIEALFVHDVAATDWEQPKDDAFTDATQAWYVYGSIKKAVMGPAVASFKNKADAVKFAQEFGGAVLPYEKIDIALLA GE >Mature_162_residues MKKLICLLFLLPLMSACSDSSADATQYTAQAIHEHDRCHLCGMMITKYPGPKGQVHLKEQSIVPKFCSTRDMFNFALQSE NKRQIEALFVHDVAATDWEQPKDDAFTDATQAWYVYGSIKKAVMGPAVASFKNKADAVKFAQEFGGAVLPYEKIDIALLA GE
Specific function: Unknown
COG id: COG4314
COG function: function code C; Predicted lipoprotein involved in nitrous oxide reduction
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17966; Mature: 17966
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLICLLFLLPLMSACSDSSADATQYTAQAIHEHDRCHLCGMMITKYPGPKGQVHLKEQ CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCC SIVPKFCSTRDMFNFALQSENKRQIEALFVHDVAATDWEQPKDDAFTDATQAWYVYGSIK CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEHHHH KAVMGPAVASFKNKADAVKFAQEFGGAVLPYEKIDIALLAGE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC >Mature Secondary Structure MKKLICLLFLLPLMSACSDSSADATQYTAQAIHEHDRCHLCGMMITKYPGPKGQVHLKEQ CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCC SIVPKFCSTRDMFNFALQSENKRQIEALFVHDVAATDWEQPKDDAFTDATQAWYVYGSIK CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEHHHH KAVMGPAVASFKNKADAVKFAQEFGGAVLPYEKIDIALLAGE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA