Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622497

Identifier: 167622497

GI number: 167622497

Start: 670161

End: 670649

Strand: Direct

Name: 167622497

Synonym: Shal_0557

Alternate gene names: NA

Gene position: 670161-670649 (Clockwise)

Preceding gene: 167622496

Following gene: 167622498

Centisome position: 12.82

GC content: 48.67

Gene sequence:

>489_bases
ATGAAAAAGTTAATCTGTTTACTATTCCTTTTACCTCTAATGAGTGCGTGTAGCGATAGCAGCGCGGATGCAACGCAATA
CACGGCCCAGGCCATTCATGAACATGACCGTTGCCACCTGTGCGGCATGATGATCACTAAGTATCCAGGGCCTAAGGGGC
AAGTTCACCTAAAAGAACAGTCGATAGTGCCCAAGTTCTGCTCGACACGCGATATGTTTAACTTCGCACTGCAGAGCGAG
AACAAACGCCAAATCGAAGCGCTCTTTGTCCATGACGTAGCAGCTACAGATTGGGAACAACCTAAAGATGACGCCTTTAC
CGATGCAACCCAGGCTTGGTATGTCTACGGCAGCATTAAAAAAGCGGTAATGGGTCCAGCGGTGGCCAGCTTTAAGAATA
AAGCCGATGCGGTTAAGTTTGCTCAGGAGTTTGGCGGCGCCGTTCTCCCATATGAAAAAATTGATATCGCCCTGTTAGCG
GGCGAATAG

Upstream 100 bases:

>100_bases
TCCTGAATTTCGCTAGCTGTGAGTAAGCTAGCCCTTCAATGTCGCCCCTGCAAGGCTATTGAAGGGGTAGCCTGAAAGCA
TATTTGATTCTGGAAATACA

Downstream 100 bases:

>100_bases
TTGTAGGTGAGTGGTTACTTACCATGGTTGCTTACAATGGTTAGTTACTAAATTATGAAGAAACTCATGAAAAATTGTGG
CTCAGAGCTGGCGCGTAACA

Product: NosL family protein

Products: NA

Alternate protein names: NosL Protein; Protein Disulfide Isomerase NosL; Lipoprotein Involved In Nitrous Oxide Reduction; Nitrous Oxide Reductase Accessory Protein NosL; Nitrous Oxide Reductase Accessory Protein; NosL Lipoprotein; Lipoprotein; Protein Disulfide Isomerase NosL Family Protein; Nosl Family Protein; NosL Copper Chaperone; NosL Protein Required For Nitrous Oxide Reduction

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKKLICLLFLLPLMSACSDSSADATQYTAQAIHEHDRCHLCGMMITKYPGPKGQVHLKEQSIVPKFCSTRDMFNFALQSE
NKRQIEALFVHDVAATDWEQPKDDAFTDATQAWYVYGSIKKAVMGPAVASFKNKADAVKFAQEFGGAVLPYEKIDIALLA
GE

Sequences:

>Translated_162_residues
MKKLICLLFLLPLMSACSDSSADATQYTAQAIHEHDRCHLCGMMITKYPGPKGQVHLKEQSIVPKFCSTRDMFNFALQSE
NKRQIEALFVHDVAATDWEQPKDDAFTDATQAWYVYGSIKKAVMGPAVASFKNKADAVKFAQEFGGAVLPYEKIDIALLA
GE
>Mature_162_residues
MKKLICLLFLLPLMSACSDSSADATQYTAQAIHEHDRCHLCGMMITKYPGPKGQVHLKEQSIVPKFCSTRDMFNFALQSE
NKRQIEALFVHDVAATDWEQPKDDAFTDATQAWYVYGSIKKAVMGPAVASFKNKADAVKFAQEFGGAVLPYEKIDIALLA
GE

Specific function: Unknown

COG id: COG4314

COG function: function code C; Predicted lipoprotein involved in nitrous oxide reduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17966; Mature: 17966

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLICLLFLLPLMSACSDSSADATQYTAQAIHEHDRCHLCGMMITKYPGPKGQVHLKEQ
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCC
SIVPKFCSTRDMFNFALQSENKRQIEALFVHDVAATDWEQPKDDAFTDATQAWYVYGSIK
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEHHHH
KAVMGPAVASFKNKADAVKFAQEFGGAVLPYEKIDIALLAGE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MKKLICLLFLLPLMSACSDSSADATQYTAQAIHEHDRCHLCGMMITKYPGPKGQVHLKEQ
CHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECCC
SIVPKFCSTRDMFNFALQSENKRQIEALFVHDVAATDWEQPKDDAFTDATQAWYVYGSIK
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEEHHHH
KAVMGPAVASFKNKADAVKFAQEFGGAVLPYEKIDIALLAGE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA