Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622465

Identifier: 167622465

GI number: 167622465

Start: 634067

End: 635122

Strand: Reverse

Name: 167622465

Synonym: Shal_0525

Alternate gene names: NA

Gene position: 635122-634067 (Counterclockwise)

Preceding gene: 167622466

Following gene: 167622464

Centisome position: 12.15

GC content: 44.41

Gene sequence:

>1056_bases
TTGAGCATAGTCGTGCGCGTCCTTAAAGCAAATCATGGAGATTGCATACTGGTTAGCCATGAAGGGCCTTCGAGTGTTTT
CAACCTACTGATAGATGGTGGGACATCGACGACTTTCAGACATGGGCCTAGGCAGCGCTATGCGGGAGCCTTATGCAATG
CTCTTGATGATCTGAAAAAGAGGGGGCAGCACGTCGATCTGGCGATCCTAACCCATATTGATGACGACCATATCCATGGC
CTTATCAAAGCTTTCGAAAAGCCTGGCTACCTCGGTCAATTAGTTAAATCAATCTGGTTCAATTCGTCTCGGTTAATAAC
ACGTCATTTTAATGTTCCTGAGATTTCGGAAAATAATATTCTATTGACTGACGATTCTCCTGAAACAAGCGTGAGTCAGG
GGAAAGAGCTCGAGACATTACTCGATGATATCGGATGTGAGCGAGCGCCTCTTATTATGGCTGGCCAATCTTATGAAGTC
GGTCCGTTCACTTTGAAAATATTGTCACCGGAGCCAAGGCAGCTGGAGCGGCTTTTGCACAAATGGCCAACTGAAGTCGA
ATCAGGTGCGACCTCATCGCATGACAATGATTACCACCTTTCTTTAAGCGAGATCTGGGCAGAAGACAAGTTTAAACCCG
ATCCGTCTATTTACAATGGAAGTTCTGTTGCATTTATCCTTGAAGCAGACGGCAAGAAAATGCTTTTTCTTGGGGACGCG
CACGACCAGGTCGTTGCAGAAAATCTAAGAGCATTTGGTTACAGCGACACGAATAAGCTTAAGCTGGATCTCGTAAAAGT
CTCACACCATGGCAGTCAGAACAATACAAGCAATGAGTTTCTTTCACTGCTGGATTCGTCACGTTACGTCATTTCAACTA
ATGGTTCTAAGCATGGGCTTCCTAATAAGAGGACAATTGCTAGGATAATGAAATCAACTAGTGGCAACGTGCTATTTAAT
TATAGGGATGTAATAACGCCCTTGCTTTTGGCTCATGAAATAGAGAGCTATTCCTCTCGTCTAGAGGTGCTCGATGATGA
GATCAGATTTGAATAA

Upstream 100 bases:

>100_bases
TTTTAGTGGTTTAATATAAAATCAAAACCATATTAGTTGATAATATTATTACGCTAGAAGAGGCGGAAATGACACGAAAA
ACAGAGAAAAGGAGATCCAG

Downstream 100 bases:

>100_bases
TACAGATGCTGAAATCATGCAGTCATACACTGTTATGGTTAATGGAGGTAGTGGTGTACTCGTCAATGCTATGACATTGG
ATTACTCCTACGTACTAACC

Product: hypothetical protein

Products: NA

Alternate protein names: Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Hydrolase-Like Protein; Beta-Lactamase Domain Protein; Beta-Lactamase Protein

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSIVVRVLKANHGDCILVSHEGPSSVFNLLIDGGTSTTFRHGPRQRYAGALCNALDDLKKRGQHVDLAILTHIDDDHIHG
LIKAFEKPGYLGQLVKSIWFNSSRLITRHFNVPEISENNILLTDDSPETSVSQGKELETLLDDIGCERAPLIMAGQSYEV
GPFTLKILSPEPRQLERLLHKWPTEVESGATSSHDNDYHLSLSEIWAEDKFKPDPSIYNGSSVAFILEADGKKMLFLGDA
HDQVVAENLRAFGYSDTNKLKLDLVKVSHHGSQNNTSNEFLSLLDSSRYVISTNGSKHGLPNKRTIARIMKSTSGNVLFN
YRDVITPLLLAHEIESYSSRLEVLDDEIRFE

Sequences:

>Translated_351_residues
MSIVVRVLKANHGDCILVSHEGPSSVFNLLIDGGTSTTFRHGPRQRYAGALCNALDDLKKRGQHVDLAILTHIDDDHIHG
LIKAFEKPGYLGQLVKSIWFNSSRLITRHFNVPEISENNILLTDDSPETSVSQGKELETLLDDIGCERAPLIMAGQSYEV
GPFTLKILSPEPRQLERLLHKWPTEVESGATSSHDNDYHLSLSEIWAEDKFKPDPSIYNGSSVAFILEADGKKMLFLGDA
HDQVVAENLRAFGYSDTNKLKLDLVKVSHHGSQNNTSNEFLSLLDSSRYVISTNGSKHGLPNKRTIARIMKSTSGNVLFN
YRDVITPLLLAHEIESYSSRLEVLDDEIRFE
>Mature_350_residues
SIVVRVLKANHGDCILVSHEGPSSVFNLLIDGGTSTTFRHGPRQRYAGALCNALDDLKKRGQHVDLAILTHIDDDHIHGL
IKAFEKPGYLGQLVKSIWFNSSRLITRHFNVPEISENNILLTDDSPETSVSQGKELETLLDDIGCERAPLIMAGQSYEVG
PFTLKILSPEPRQLERLLHKWPTEVESGATSSHDNDYHLSLSEIWAEDKFKPDPSIYNGSSVAFILEADGKKMLFLGDAH
DQVVAENLRAFGYSDTNKLKLDLVKVSHHGSQNNTSNEFLSLLDSSRYVISTNGSKHGLPNKRTIARIMKSTSGNVLFNY
RDVITPLLLAHEIESYSSRLEVLDDEIRFE

Specific function: Unknown

COG id: COG2333

COG function: function code R; Predicted hydrolase (metallo-beta-lactamase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39189; Mature: 39057

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIVVRVLKANHGDCILVSHEGPSSVFNLLIDGGTSTTFRHGPRQRYAGALCNALDDLKK
CCEEEEEEECCCCCEEEEECCCHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RGQHVDLAILTHIDDDHIHGLIKAFEKPGYLGQLVKSIWFNSSRLITRHFNVPEISENNI
CCCEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCE
LLTDDSPETSVSQGKELETLLDDIGCERAPLIMAGQSYEVGPFTLKILSPEPRQLERLLH
EEECCCCCCHHHCCHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHH
KWPTEVESGATSSHDNDYHLSLSEIWAEDKFKPDPSIYNGSSVAFILEADGKKMLFLGDA
HCCCHHHCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECC
HDQVVAENLRAFGYSDTNKLKLDLVKVSHHGSQNNTSNEFLSLLDSSRYVISTNGSKHGL
HHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEECCCCCCC
PNKRTIARIMKSTSGNVLFNYRDVITPLLLAHEIESYSSRLEVLDDEIRFE
CCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIVVRVLKANHGDCILVSHEGPSSVFNLLIDGGTSTTFRHGPRQRYAGALCNALDDLKK
CEEEEEEECCCCCEEEEECCCHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHH
RGQHVDLAILTHIDDDHIHGLIKAFEKPGYLGQLVKSIWFNSSRLITRHFNVPEISENNI
CCCEEEEEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCE
LLTDDSPETSVSQGKELETLLDDIGCERAPLIMAGQSYEVGPFTLKILSPEPRQLERLLH
EEECCCCCCHHHCCHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEECCCHHHHHHHHH
KWPTEVESGATSSHDNDYHLSLSEIWAEDKFKPDPSIYNGSSVAFILEADGKKMLFLGDA
HCCCHHHCCCCCCCCCCEEEEHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEECC
HDQVVAENLRAFGYSDTNKLKLDLVKVSHHGSQNNTSNEFLSLLDSSRYVISTNGSKHGL
HHHHHHHHHHHCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHHCCCCEEEEECCCCCCC
PNKRTIARIMKSTSGNVLFNYRDVITPLLLAHEIESYSSRLEVLDDEIRFE
CCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA