Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622452

Identifier: 167622452

GI number: 167622452

Start: 618555

End: 619193

Strand: Direct

Name: 167622452

Synonym: Shal_0512

Alternate gene names: NA

Gene position: 618555-619193 (Clockwise)

Preceding gene: 167622451

Following gene: 167622456

Centisome position: 11.83

GC content: 35.68

Gene sequence:

>639_bases
ATGAGTCATGAACCTCATGAACTTTGTGAAGCACTTAAGCAAATTTCTACACCCAAAACAGCAAGTTCAATAGAGCTAAT
TCATCAGATATGCACTGAGCAGTCTGAACGTGGGTCCTGTGATTTTACAATAGCGACGATTGGACGTTTAAGTGAAGCTG
TTAATGGCCCGAAGACACAGGCCATCAGAAATAAAACAGGTGAAAAATACCGAGCACTTATTCAATCATGGGCAGAATAT
AAAAAGCCCTTAAAAGTTATCACAAGCAAAGTAAAAGAACAAAATGCATGGGTTGATGATATTGACGATGCCCGTATCAA
ATGGCTCGTAATGGATTTAATAGCACAAAATAGTAAGTTAACTGGGCAACTTCAATTAGCAAAAGAGCTATCAAATATTA
ATATTGATCTAAGACCAGTAGCTAATAACAATGCAATGGAAAGTTCATCTCATCTATCTTTAACTAAGTCGAATCTACTC
CCAACTGAAGTAGAAGCTATATCATACTCTATTGACCCTGATAGATTTGAAAAAAATGGCTGGATAGCAGATAAGCGTGG
AAGAGTTAAAGATCGTAATGGTAATACAATATTCAAAGCGGGTTATGTCGATGCTATTGAAAAAATATTATCTTTATAA

Upstream 100 bases:

>100_bases
ATGATAATCAGCTCATGCCGCTTCATGATGAAGTGAAGAAGATCTTACTCCAAAGCCAAGCGAATCAACTGAACATTAAC
AAGCCTTTATTGGAGGCAGT

Downstream 100 bases:

>100_bases
GGCATTGATCTGTAAGTGCCAAATTCTCACAACTGATTTAGTCCATGAAATTATTTATTTTCTTGGCATAAGTTAATCCA
GTATTGTGGCCAACAAAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSHEPHELCEALKQISTPKTASSIELIHQICTEQSERGSCDFTIATIGRLSEAVNGPKTQAIRNKTGEKYRALIQSWAEY
KKPLKVITSKVKEQNAWVDDIDDARIKWLVMDLIAQNSKLTGQLQLAKELSNINIDLRPVANNNAMESSSHLSLTKSNLL
PTEVEAISYSIDPDRFEKNGWIADKRGRVKDRNGNTIFKAGYVDAIEKILSL

Sequences:

>Translated_212_residues
MSHEPHELCEALKQISTPKTASSIELIHQICTEQSERGSCDFTIATIGRLSEAVNGPKTQAIRNKTGEKYRALIQSWAEY
KKPLKVITSKVKEQNAWVDDIDDARIKWLVMDLIAQNSKLTGQLQLAKELSNINIDLRPVANNNAMESSSHLSLTKSNLL
PTEVEAISYSIDPDRFEKNGWIADKRGRVKDRNGNTIFKAGYVDAIEKILSL
>Mature_211_residues
SHEPHELCEALKQISTPKTASSIELIHQICTEQSERGSCDFTIATIGRLSEAVNGPKTQAIRNKTGEKYRALIQSWAEYK
KPLKVITSKVKEQNAWVDDIDDARIKWLVMDLIAQNSKLTGQLQLAKELSNINIDLRPVANNNAMESSSHLSLTKSNLLP
TEVEAISYSIDPDRFEKNGWIADKRGRVKDRNGNTIFKAGYVDAIEKILSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23764; Mature: 23633

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHEPHELCEALKQISTPKTASSIELIHQICTEQSERGSCDFTIATIGRLSEAVNGPKTQ
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHH
AIRNKTGEKYRALIQSWAEYKKPLKVITSKVKEQNAWVDDIDDARIKWLVMDLIAQNSKL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
TGQLQLAKELSNINIDLRPVANNNAMESSSHLSLTKSNLLPTEVEAISYSIDPDRFEKNG
HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEHHCCCCCHHHHHEEECCCHHHHCCCC
WIADKRGRVKDRNGNTIFKAGYVDAIEKILSL
CEECCCCCCCCCCCCEEEECHHHHHHHHHHCC
>Mature Secondary Structure 
SHEPHELCEALKQISTPKTASSIELIHQICTEQSERGSCDFTIATIGRLSEAVNGPKTQ
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHH
AIRNKTGEKYRALIQSWAEYKKPLKVITSKVKEQNAWVDDIDDARIKWLVMDLIAQNSKL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC
TGQLQLAKELSNINIDLRPVANNNAMESSSHLSLTKSNLLPTEVEAISYSIDPDRFEKNG
HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEHHCCCCCHHHHHEEECCCHHHHCCCC
WIADKRGRVKDRNGNTIFKAGYVDAIEKILSL
CEECCCCCCCCCCCCEEEECHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA