| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167622448
Identifier: 167622448
GI number: 167622448
Start: 612991
End: 613242
Strand: Reverse
Name: 167622448
Synonym: Shal_0508
Alternate gene names: NA
Gene position: 613242-612991 (Counterclockwise)
Preceding gene: 167622453
Following gene: 167622444
Centisome position: 11.73
GC content: 43.65
Gene sequence:
>252_bases ATGAACATGCTAGTTGCATTACATTCTAAAGAGAAGCGAGGGGCTACACTCGATCATGACACTCATTGGGATGCCATGAG TGCGGAGCAGAAGATTGCTCTGTATGATCTACATAAGTTTGGCTTCCGATTACTGTTTGTCCGCCACTTAACTAGCGGTC CACTGGCATTTATTATGCAAAATAAAACCCTTGCAGTGATCAGCAAAAATGGTGATGTCGACTACTCACCCGATGTAAAG TTACGAGCCTAA
Upstream 100 bases:
>100_bases AATAAATATTGTCTCATTATTTGTCGGATAAAAACTAGTCATATTAGCTGGCGGTTGTATACTTAAACCTTATCGGTCCC ACTACGATACTTATAGAGAG
Downstream 100 bases:
>100_bases CCAGTTAACCTATTTGTGATTGGTCATAACGCAAAAAAGCGCACTTGAGTGCGCTTTTTCATATCGATTATTCAATGCTA GTTGTTTAAGGTTAACAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MNMLVALHSKEKRGATLDHDTHWDAMSAEQKIALYDLHKFGFRLLFVRHLTSGPLAFIMQNKTLAVISKNGDVDYSPDVK LRA
Sequences:
>Translated_83_residues MNMLVALHSKEKRGATLDHDTHWDAMSAEQKIALYDLHKFGFRLLFVRHLTSGPLAFIMQNKTLAVISKNGDVDYSPDVK LRA >Mature_83_residues MNMLVALHSKEKRGATLDHDTHWDAMSAEQKIALYDLHKFGFRLLFVRHLTSGPLAFIMQNKTLAVISKNGDVDYSPDVK LRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9425; Mature: 9425
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMLVALHSKEKRGATLDHDTHWDAMSAEQKIALYDLHKFGFRLLFVRHLTSGPLAFIMQ CCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHEECCCCCCEEEEEC NKTLAVISKNGDVDYSPDVKLRA CCEEEEEECCCCCCCCCCEEEEC >Mature Secondary Structure MNMLVALHSKEKRGATLDHDTHWDAMSAEQKIALYDLHKFGFRLLFVRHLTSGPLAFIMQ CCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHEECCCCCCEEEEEC NKTLAVISKNGDVDYSPDVKLRA CCEEEEEECCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA