Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is yacG [C]

Identifier: 167622405

GI number: 167622405

Start: 552783

End: 553022

Strand: Reverse

Name: yacG [C]

Synonym: Shal_0465

Alternate gene names: 167622405

Gene position: 553022-552783 (Counterclockwise)

Preceding gene: 167622406

Following gene: 167622404

Centisome position: 10.58

GC content: 39.17

Gene sequence:

>240_bases
ATGTCTTTAACCGTAAAATGCCCAACATGCCAAGCACCTGTAACTTGGAGTGCTGACTCTGAATTTAAGCCTTTTTGCAG
TGAGCGTTGTAAACTGATCGATCTTGGAGATTGGGCGTCAGAGAAAAATGTTATTCCAGTCAAATCTGAGTTCGATCCTG
AGATGCTAGATCAATTAGGTTATGATGAAGCCGATTTTTTCCTTGATGAAAATCCTTTTAAGGATGACAAAAACCAATGA

Upstream 100 bases:

>100_bases
CTGACCAAGCTATCGAATTCGAGTTGGCAACCTGCAGCTAACACTTTAAAATCTACTAATACACTTTTAAGCGTCAGCCC
CCTAACTGACAAGGTTCATT

Downstream 100 bases:

>100_bases
GCCAGCAAATTCATGTTGCCGTTGGTGTTATTCAAGACTCAGATAATCGAATCCTCATAGCGAAACGCCCAGAACACCTT
CACCAAGGAGGAAAGTGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MSLTVKCPTCQAPVTWSADSEFKPFCSERCKLIDLGDWASEKNVIPVKSEFDPEMLDQLGYDEADFFLDENPFKDDKNQ

Sequences:

>Translated_79_residues
MSLTVKCPTCQAPVTWSADSEFKPFCSERCKLIDLGDWASEKNVIPVKSEFDPEMLDQLGYDEADFFLDENPFKDDKNQ
>Mature_78_residues
SLTVKCPTCQAPVTWSADSEFKPFCSERCKLIDLGDWASEKNVIPVKSEFDPEMLDQLGYDEADFFLDENPFKDDKNQ

Specific function: Unknown

COG id: COG3024

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0243 family

Homologues:

Organism=Escherichia coli, GI1786290, Length=50, Percent_Identity=52, Blast_Score=63, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y465_SHEHH (B0TQP7)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001672699.1
- ProteinModelPortal:   B0TQP7
- SMR:   B0TQP7
- GeneID:   5906235
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_0465
- HOGENOM:   HBG552546
- OMA:   LTVKCPT
- ProtClustDB:   CLSK905736
- BioCyc:   SHAL458817:SHAL_0465-MONOMER
- HAMAP:   MF_00649
- InterPro:   IPR005584
- InterPro:   IPR013088
- Gene3D:   G3DSA:3.30.50.10

Pfam domain/function: PF03884 DUF329

EC number: NA

Molecular weight: Translated: 9055; Mature: 8924

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTVKCPTCQAPVTWSADSEFKPFCSERCKLIDLGDWASEKNVIPVKSEFDPEMLDQLG
CCEEECCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCHHHHHHCC
YDEADFFLDENPFKDDKNQ
CCCCCEEECCCCCCCCCCC
>Mature Secondary Structure 
SLTVKCPTCQAPVTWSADSEFKPFCSERCKLIDLGDWASEKNVIPVKSEFDPEMLDQLG
CEEECCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCHHHHHHCC
YDEADFFLDENPFKDDKNQ
CCCCCEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA