| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is yacG [C]
Identifier: 167622405
GI number: 167622405
Start: 552783
End: 553022
Strand: Reverse
Name: yacG [C]
Synonym: Shal_0465
Alternate gene names: 167622405
Gene position: 553022-552783 (Counterclockwise)
Preceding gene: 167622406
Following gene: 167622404
Centisome position: 10.58
GC content: 39.17
Gene sequence:
>240_bases ATGTCTTTAACCGTAAAATGCCCAACATGCCAAGCACCTGTAACTTGGAGTGCTGACTCTGAATTTAAGCCTTTTTGCAG TGAGCGTTGTAAACTGATCGATCTTGGAGATTGGGCGTCAGAGAAAAATGTTATTCCAGTCAAATCTGAGTTCGATCCTG AGATGCTAGATCAATTAGGTTATGATGAAGCCGATTTTTTCCTTGATGAAAATCCTTTTAAGGATGACAAAAACCAATGA
Upstream 100 bases:
>100_bases CTGACCAAGCTATCGAATTCGAGTTGGCAACCTGCAGCTAACACTTTAAAATCTACTAATACACTTTTAAGCGTCAGCCC CCTAACTGACAAGGTTCATT
Downstream 100 bases:
>100_bases GCCAGCAAATTCATGTTGCCGTTGGTGTTATTCAAGACTCAGATAATCGAATCCTCATAGCGAAACGCCCAGAACACCTT CACCAAGGAGGAAAGTGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MSLTVKCPTCQAPVTWSADSEFKPFCSERCKLIDLGDWASEKNVIPVKSEFDPEMLDQLGYDEADFFLDENPFKDDKNQ
Sequences:
>Translated_79_residues MSLTVKCPTCQAPVTWSADSEFKPFCSERCKLIDLGDWASEKNVIPVKSEFDPEMLDQLGYDEADFFLDENPFKDDKNQ >Mature_78_residues SLTVKCPTCQAPVTWSADSEFKPFCSERCKLIDLGDWASEKNVIPVKSEFDPEMLDQLGYDEADFFLDENPFKDDKNQ
Specific function: Unknown
COG id: COG3024
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0243 family
Homologues:
Organism=Escherichia coli, GI1786290, Length=50, Percent_Identity=52, Blast_Score=63, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y465_SHEHH (B0TQP7)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001672699.1 - ProteinModelPortal: B0TQP7 - SMR: B0TQP7 - GeneID: 5906235 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_0465 - HOGENOM: HBG552546 - OMA: LTVKCPT - ProtClustDB: CLSK905736 - BioCyc: SHAL458817:SHAL_0465-MONOMER - HAMAP: MF_00649 - InterPro: IPR005584 - InterPro: IPR013088 - Gene3D: G3DSA:3.30.50.10
Pfam domain/function: PF03884 DUF329
EC number: NA
Molecular weight: Translated: 9055; Mature: 8924
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTVKCPTCQAPVTWSADSEFKPFCSERCKLIDLGDWASEKNVIPVKSEFDPEMLDQLG CCEEECCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCHHHHHHCC YDEADFFLDENPFKDDKNQ CCCCCEEECCCCCCCCCCC >Mature Secondary Structure SLTVKCPTCQAPVTWSADSEFKPFCSERCKLIDLGDWASEKNVIPVKSEFDPEMLDQLG CEEECCCCCCCCEEECCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCCHHHHHHCC YDEADFFLDENPFKDDKNQ CCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA