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The map label for this gene is dmsC [H]

Identifier: 167622345

GI number: 167622345

Start: 475223

End: 476062

Strand: Reverse

Name: dmsC [H]

Synonym: Shal_0405

Alternate gene names: 167622345

Gene position: 476062-475223 (Counterclockwise)

Preceding gene: 167622346

Following gene: 167622344

Centisome position: 9.11

GC content: 47.62

Gene sequence:

>840_bases
ATGCATGAAATCCCATTAGTGATCTTTACTGTGCTTGCCCAAGCGGTAGCTGGTAGCTTTATCCTGCTATGTGCCCTGCG
TCTAGCATACCCTCAGCAGCTTGGTGGCAACAGCCAACTATTGCAGCGATGTTTTCTATGCCTTTGGTCTATATTTGCCA
TTGCTGGTTTAGCCGCGACTACCCACCTAGGCCAACCGCTTAGAGCCGCCAATGTACTCTTTGGCCTCGCTCACCTCTCT
CCCATGAGTGTTGAAATAATCATGGTATCGATTTTTGGTGCTCTCGGAACAGGCTCAAGTTTACTACTATGGCGCAAGGC
GGATAGCCGCTTAGTGAATATCTTACTATTGACCGCCGCTCTAGCCGCTATCGGTCAACTATTTGCCATCGCCAACGTCT
ACAGCTTGCCGACAGTCTATCTGTGGAGCAACCACTGGACGCCAATCAACTTGGTCTTTAGCGGGCTGATCACGGGATCC
ATGTTAACGAGTCTTTTACTCAATACATGTCAAATACAGCCCGTAAAAACACCATTAAAGCTAAGTGCACTCAAGCCTAT
CTTGGCCATTATATTCCTACTAACACTCGTATTAAGCACCGCTTACGCCATGCAGTTAACCGAGCAACTGCATAAGCTAG
GAGCATCACTACCCGTGTGGCTACAGCTACTACAAATAGGCCGCATATCCCTACTCGCTATCGGCTTTATCAGCTGTCTA
GTCATCAAGTTAAACACCTACAAATCCACGCCGTTGTTACTGGCAACCCTTACTGTGTTAACCGCTGAAATACTTGGGCG
GATATTATTTTACGAACTCGGTTTACTCCAGCAGCTCTAG

Upstream 100 bases:

>100_bases
CTTCTCTAACAAAGCCTTCACTGGTGATAAAACCTAACCGTCACGCTAAACCTACAGGTGATAAGAGTGGTGCGCTTTGT
AATAAGGCGGAGCTTTAATC

Downstream 100 bases:

>100_bases
CTCTGCTTTTAGGTTATAGGAACTTTCATTATGTTTAATAAGCAAAAAAATACCTTAAGCACCGAGTCACAGGGTGTATC
TCGTCGTGGCTTTCTTAAAT

Product: putative anaerobic dimethyl sulfoxide reductase subunit C

Products: Reduced form of N-Oxide compounds [C]

Alternate protein names: DMSO reductase anchor subunit [H]

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MHEIPLVIFTVLAQAVAGSFILLCALRLAYPQQLGGNSQLLQRCFLCLWSIFAIAGLAATTHLGQPLRAANVLFGLAHLS
PMSVEIIMVSIFGALGTGSSLLLWRKADSRLVNILLLTAALAAIGQLFAIANVYSLPTVYLWSNHWTPINLVFSGLITGS
MLTSLLLNTCQIQPVKTPLKLSALKPILAIIFLLTLVLSTAYAMQLTEQLHKLGASLPVWLQLLQIGRISLLAIGFISCL
VIKLNTYKSTPLLLATLTVLTAEILGRILFYELGLLQQL

Sequences:

>Translated_279_residues
MHEIPLVIFTVLAQAVAGSFILLCALRLAYPQQLGGNSQLLQRCFLCLWSIFAIAGLAATTHLGQPLRAANVLFGLAHLS
PMSVEIIMVSIFGALGTGSSLLLWRKADSRLVNILLLTAALAAIGQLFAIANVYSLPTVYLWSNHWTPINLVFSGLITGS
MLTSLLLNTCQIQPVKTPLKLSALKPILAIIFLLTLVLSTAYAMQLTEQLHKLGASLPVWLQLLQIGRISLLAIGFISCL
VIKLNTYKSTPLLLATLTVLTAEILGRILFYELGLLQQL
>Mature_279_residues
MHEIPLVIFTVLAQAVAGSFILLCALRLAYPQQLGGNSQLLQRCFLCLWSIFAIAGLAATTHLGQPLRAANVLFGLAHLS
PMSVEIIMVSIFGALGTGSSLLLWRKADSRLVNILLLTAALAAIGQLFAIANVYSLPTVYLWSNHWTPINLVFSGLITGS
MLTSLLLNTCQIQPVKTPLKLSALKPILAIIFLLTLVLSTAYAMQLTEQLHKLGASLPVWLQLLQIGRISLLAIGFISCL
VIKLNTYKSTPLLLATLTVLTAEILGRILFYELGLLQQL

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. DmsC anchors the dmsAB dimer to the membrane and stabilizes it [H]

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ynfH [H]

Homologues:

Organism=Escherichia coli, GI1787123, Length=276, Percent_Identity=31.1594202898551, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787873, Length=283, Percent_Identity=30.0353356890459, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007059 [H]

Pfam domain/function: PF04976 DmsC [H]

EC number: NA

Molecular weight: Translated: 30240; Mature: 30240

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEIPLVIFTVLAQAVAGSFILLCALRLAYPQQLGGNSQLLQRCFLCLWSIFAIAGLAAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
THLGQPLRAANVLFGLAHLSPMSVEIIMVSIFGALGTGSSLLLWRKADSRLVNILLLTAA
HHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHH
LAAIGQLFAIANVYSLPTVYLWSNHWTPINLVFSGLITGSMLTSLLLNTCQIQPVKTPLK
HHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LSALKPILAIIFLLTLVLSTAYAMQLTEQLHKLGASLPVWLQLLQIGRISLLAIGFISCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VIKLNTYKSTPLLLATLTVLTAEILGRILFYELGLLQQL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHEIPLVIFTVLAQAVAGSFILLCALRLAYPQQLGGNSQLLQRCFLCLWSIFAIAGLAAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
THLGQPLRAANVLFGLAHLSPMSVEIIMVSIFGALGTGSSLLLWRKADSRLVNILLLTAA
HHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHH
LAAIGQLFAIANVYSLPTVYLWSNHWTPINLVFSGLITGSMLTSLLLNTCQIQPVKTPLK
HHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
LSALKPILAIIFLLTLVLSTAYAMQLTEQLHKLGASLPVWLQLLQIGRISLLAIGFISCL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
VIKLNTYKSTPLLLATLTVLTAEILGRILFYELGLLQQL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N-Oxide; Sulfoxide Compounds Including Trimethylamine N-Oxide. [C]

Specific reaction: Reduces Various N-Oxide And Sulfoxide Compounds Including Trimethylamine N-Oxide. [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3062312; 8905232; 9278503; 8429002; 2170332 [H]