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The map label for this gene is fdoI [C]

Identifier: 167622056

GI number: 167622056

Start: 131154

End: 132137

Strand: Direct

Name: fdoI [C]

Synonym: Shal_0115

Alternate gene names: 167622056

Gene position: 131154-132137 (Clockwise)

Preceding gene: 167622055

Following gene: 167622057

Centisome position: 2.51

GC content: 46.65

Gene sequence:

>984_bases
ATGAACAAATGGTTCAAACACATAGGCGTGGCAATTGCACTGTTCTTCAGTGTGTCTATATTTGCTAACGCAAGTGACAA
AGTAGGCGACACCATTGAAGTGAACAACGGCCAAGTCTGGGCCCAGCTTAAAGCTGGCGAAGAGGGTCGTACGACTTCAA
CAAGTGAATTCCACGGTCAAGCAATTAACATGTATGACCTACGTGTACTTGACTTGCGTAGTGATATTCTTGCTCCAGCA
ATGATGGCAGCCCTTTTCGGCATGATCATCATCTTTGTACTGTTTATCAAAGTGAACGGCATCTCTAAGCTTCATGGCGG
TTACTCTGGTAAGCTGGTATACCGTTGGTCTAAGTTTGACGTATCTATTCACTGGTTAGGTGCGATCCCTTGCCTGCTAT
TGATCCTGACAGGCTTAACGCTACTTGCTGGACGCTTCTTCTTCCAGCCGTACATCGGTGAAGGCTTCTGGGGCGCTCTA
GTTAACGCTGCTAAGCAGATCCACGACATCATGGCGATCCCGTTCATGATCGGTTGGGCGCTTATGACAGTGCTGTGGGC
TAAGAACCAAATGCCTAAGATGTATGACCTTAAGTGGATGATGGTTGTTGGTGGTTACATCAACTTCGGTCCATTTAAAG
GCAAGCATCCTGATGCAGGTTTTGCTAACGCGGGTGAGAAGTTATGGTTCTGGGCATTCGCTGTGTTCGGTCTAGTGGTT
TCAGCATCGGGTATGCTGTTGCTATTCCCGAACCTGTTCGAGCCTAGCCGTACGCTAAGCTTAGTGGCACTAATTCTTCA
CTCTGTCGCTGCAATCATCATTACTGCTTTCTCAATCGTGCATATCTTTATGGCAACGGTTATGTCTGAAGGTGGTATGG
AGTGTATGGTTTCAGGTTACTGTGATGAAACATGGGCCAGCCAGCACCACAATCTTTGGTTCGATGAGATCAAAGAAAAC
GGTACTCTTAAGTACAAAGAGTAA

Upstream 100 bases:

>100_bases
TTCTAACAAAAATGTTTGGGGCTAAACCTTAAATATTAAGTTAGTCCATAATCGCTGCAAGCTGTCTATTTTAGGTGGCT
TGCAGCAATCAGGAGTTGAT

Downstream 100 bases:

>100_bases
TCCTCTTTACACTTAATGCCTAAACACCTCAGCTATTAGTAGTTGGGGTGTTTTTATATGTGGATGGGGTTGTATGTTTT
ATGCGCAATCGCTAAAGTAT

Product: formate dehydrogenase subunit gamma

Products: CO2; NADH

Alternate protein names: Formate Dehydrogenase Cytochrome; Formate Dehydrogenase Subunit Gamma; Formate Dehydrogenase Subunit C; Formate Dehydrogenase Cytochrome B Subunit; Formate Dehydrogenase C Subunit; Formate Dehydrogenase; Formate Dehydrogenase-N; Cytochrome B Subunit Of Formate Dehydrogenase; Formate Dehydrogenase Cytochromesubunit B; Formate Dehydrogenase Subunit C FdnI; Cytochrome; Formate Dehydrogenase Cytochrome C Subunit Gamma Subunit; Formate Dehydrogenase N Gamma Subunit

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MNKWFKHIGVAIALFFSVSIFANASDKVGDTIEVNNGQVWAQLKAGEEGRTTSTSEFHGQAINMYDLRVLDLRSDILAPA
MMAALFGMIIIFVLFIKVNGISKLHGGYSGKLVYRWSKFDVSIHWLGAIPCLLLILTGLTLLAGRFFFQPYIGEGFWGAL
VNAAKQIHDIMAIPFMIGWALMTVLWAKNQMPKMYDLKWMMVVGGYINFGPFKGKHPDAGFANAGEKLWFWAFAVFGLVV
SASGMLLLFPNLFEPSRTLSLVALILHSVAAIIITAFSIVHIFMATVMSEGGMECMVSGYCDETWASQHHNLWFDEIKEN
GTLKYKE

Sequences:

>Translated_327_residues
MNKWFKHIGVAIALFFSVSIFANASDKVGDTIEVNNGQVWAQLKAGEEGRTTSTSEFHGQAINMYDLRVLDLRSDILAPA
MMAALFGMIIIFVLFIKVNGISKLHGGYSGKLVYRWSKFDVSIHWLGAIPCLLLILTGLTLLAGRFFFQPYIGEGFWGAL
VNAAKQIHDIMAIPFMIGWALMTVLWAKNQMPKMYDLKWMMVVGGYINFGPFKGKHPDAGFANAGEKLWFWAFAVFGLVV
SASGMLLLFPNLFEPSRTLSLVALILHSVAAIIITAFSIVHIFMATVMSEGGMECMVSGYCDETWASQHHNLWFDEIKEN
GTLKYKE
>Mature_327_residues
MNKWFKHIGVAIALFFSVSIFANASDKVGDTIEVNNGQVWAQLKAGEEGRTTSTSEFHGQAINMYDLRVLDLRSDILAPA
MMAALFGMIIIFVLFIKVNGISKLHGGYSGKLVYRWSKFDVSIHWLGAIPCLLLILTGLTLLAGRFFFQPYIGEGFWGAL
VNAAKQIHDIMAIPFMIGWALMTVLWAKNQMPKMYDLKWMMVVGGYINFGPFKGKHPDAGFANAGEKLWFWAFAVFGLVV
SASGMLLLFPNLFEPSRTLSLVALILHSVAAIIITAFSIVHIFMATVMSEGGMECMVSGYCDETWASQHHNLWFDEIKEN
GTLKYKE

Specific function: Allows To Use Formate As Major Electron Donor During Aerobic Respiration. Subunit Gamma Is Probably The Cytochrome B556(Fdo) Component Of The Formate Dehydrogenase. [C]

COG id: COG2864

COG function: function code C; Cytochrome b subunit of formate dehydrogenase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790325, Length=109, Percent_Identity=33.0275229357798, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787750, Length=223, Percent_Identity=23.7668161434978, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.1.2

Molecular weight: Translated: 36458; Mature: 36458

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKWFKHIGVAIALFFSVSIFANASDKVGDTIEVNNGQVWAQLKAGEEGRTTSTSEFHGQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCHHHCCC
AINMYDLRVLDLRSDILAPAMMAALFGMIIIFVLFIKVNGISKLHGGYSGKLVYRWSKFD
EEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEEEEEE
VSIHWLGAIPCLLLILTGLTLLAGRFFFQPYIGEGFWGALVNAAKQIHDIMAIPFMIGWA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LMTVLWAKNQMPKMYDLKWMMVVGGYINFGPFKGKHPDAGFANAGEKLWFWAFAVFGLVV
HHHHHHHCCCCCCHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
SASGMLLLFPNLFEPSRTLSLVALILHSVAAIIITAFSIVHIFMATVMSEGGMECMVSGY
HCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
CDETWASQHHNLWFDEIKENGTLKYKE
CCHHHHCCCCCCCHHHHCCCCCEEECC
>Mature Secondary Structure
MNKWFKHIGVAIALFFSVSIFANASDKVGDTIEVNNGQVWAQLKAGEEGRTTSTSEFHGQ
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCHHHCCC
AINMYDLRVLDLRSDILAPAMMAALFGMIIIFVLFIKVNGISKLHGGYSGKLVYRWSKFD
EEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEEEEEE
VSIHWLGAIPCLLLILTGLTLLAGRFFFQPYIGEGFWGALVNAAKQIHDIMAIPFMIGWA
EEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LMTVLWAKNQMPKMYDLKWMMVVGGYINFGPFKGKHPDAGFANAGEKLWFWAFAVFGLVV
HHHHHHHCCCCCCHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
SASGMLLLFPNLFEPSRTLSLVALILHSVAAIIITAFSIVHIFMATVMSEGGMECMVSGY
HCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECC
CDETWASQHHNLWFDEIKENGTLKYKE
CCHHHHCCCCCCCHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; NAD+

Specific reaction: formate + NAD+ = CO2 + NADH

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA