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The map label for this gene is fdoI [C]

Identifier: 167622048

GI number: 167622048

Start: 119926

End: 120933

Strand: Direct

Name: fdoI [C]

Synonym: Shal_0107

Alternate gene names: 167622048

Gene position: 119926-120933 (Clockwise)

Preceding gene: 167622047

Following gene: 167622049

Centisome position: 2.29

GC content: 44.05

Gene sequence:

>1008_bases
ATGTTTATGAAATCACTGCGCAGCCTATTTGCACTGCTAGTAATTCCATTGGTGCTTTCAATGGGGTTGGGGCTTAGCGC
TTCAGTAATGGCTGCGGATGGTCAAACTAATCAGCAACAAGTTGCTACCAATGACGTCGATCTTTGGCGTGCCGTTAAGT
CGGGCGAGTCGGGTTATACCACGGCAAACAATGTTGAGGCTGGTGTGCTAATCAATGTCGTGGGTAACGAAGGCAAGGAT
ATCCGCAATGAGTATTTAATTCCCGTGATGGGGATTACTGTTGTCGCTGTTTTTGCTGCATTTCTATTTTTCTATTTAGT
GAATGGCCCTTCGAAATTGAGCAAGGGCTTTTCAGGAAAAATGGTCTTGCGTTGGTCAAAAGCTGATCTATGGATCCACT
GGGTGTTGGCGACCTCTTGTTTGGCGCTGATCTTCACCGGTCTTAATATCATGCTAGGCAAGTACATATTGCAACCCTAC
ATAGGTGAAGGTCTATGGGCTGGGCTGATTTATGGTAGCAAGACAATACATGATTGGGTTGGACCGGTATTTATCGTGTC
TTGGATCCTGTGTGTTGTTAAGTGGATGCCGCTGCAAACCTTCAAGATGTATGACTTAAAATGGTTCTTAGTGGTTGGTG
GTTACATCAACTTCGGCCCATTCAAAGGCAAGCATCCTGATAGTGGATTTGCTAACGCCGGTGAGAAAATGTGGTTCTGG
ACATTAACTATTTTCGGTTTATTTATTGCCGCATCTGGGTTAATGCTTGTATTGCCAGGTTTAGATCTACCACGTGAAGC
TTCGATGGCTGCACTGTTAATCCATGCTATAAGCGCGATTATTATTATCGCATTTACTATCGTCCATGTTTGGATGGCAA
CGGTATTAAGTGAAGGTGGTATGGAGTGTATGGTATCGGGTTATTGCGATGAGAACTGGGCAGTCCAGCATCACAATCTT
TGGTACGATGAATTGAAAGATAGCAATAGTATCGCTTACAAAGACTAA

Upstream 100 bases:

>100_bases
GCGGCGCACCAGAAGCGCTTTGGGGTTATAAACCAACAACTGGCTAGTCTGGCTGAATAGGACTGCAGGCCTTGGCTTGC
GGTCCAATGAAGGAGTGAAT

Downstream 100 bases:

>100_bases
CGCTAGTTTCATTATCAGCATAAAAAATGCCTCGACTCAGTCGGGGCATTTTTATTTTTGTAGGTTTTCAATTGCTGCTT
TTCCCTCAATTACTCATTCT

Product: formate dehydrogenase subunit gamma

Products: CO2; NADH

Alternate protein names: Formate Dehydrogenase Cytochrome; Formate Dehydrogenase Subunit C; Formate Dehydrogenase C Subunit; Formate Dehydrogenase Subunit Gamma; Formate Dehydrogenase; Formate Dehydrogenase Cytochrome B Subunit; Formate Dehydrogenase-N; Cytochrome B Subunit Of Formate Dehydrogenase; Formate Dehydrogenase B-Type Cytochrome Subunit; Formate Dehydrogenase Subunit C FdnI; Formate Dehydrogenase Cytochromesubunit B; Cytochrome; Formate Dehydrogenase Cytochrome C Subunit Gamma Subunit; Formate Dehydrogenase N Gamma Subunit

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MFMKSLRSLFALLVIPLVLSMGLGLSASVMAADGQTNQQQVATNDVDLWRAVKSGESGYTTANNVEAGVLINVVGNEGKD
IRNEYLIPVMGITVVAVFAAFLFFYLVNGPSKLSKGFSGKMVLRWSKADLWIHWVLATSCLALIFTGLNIMLGKYILQPY
IGEGLWAGLIYGSKTIHDWVGPVFIVSWILCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEKMWFW
TLTIFGLFIAASGLMLVLPGLDLPREASMAALLIHAISAIIIIAFTIVHVWMATVLSEGGMECMVSGYCDENWAVQHHNL
WYDELKDSNSIAYKD

Sequences:

>Translated_335_residues
MFMKSLRSLFALLVIPLVLSMGLGLSASVMAADGQTNQQQVATNDVDLWRAVKSGESGYTTANNVEAGVLINVVGNEGKD
IRNEYLIPVMGITVVAVFAAFLFFYLVNGPSKLSKGFSGKMVLRWSKADLWIHWVLATSCLALIFTGLNIMLGKYILQPY
IGEGLWAGLIYGSKTIHDWVGPVFIVSWILCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEKMWFW
TLTIFGLFIAASGLMLVLPGLDLPREASMAALLIHAISAIIIIAFTIVHVWMATVLSEGGMECMVSGYCDENWAVQHHNL
WYDELKDSNSIAYKD
>Mature_335_residues
MFMKSLRSLFALLVIPLVLSMGLGLSASVMAADGQTNQQQVATNDVDLWRAVKSGESGYTTANNVEAGVLINVVGNEGKD
IRNEYLIPVMGITVVAVFAAFLFFYLVNGPSKLSKGFSGKMVLRWSKADLWIHWVLATSCLALIFTGLNIMLGKYILQPY
IGEGLWAGLIYGSKTIHDWVGPVFIVSWILCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEKMWFW
TLTIFGLFIAASGLMLVLPGLDLPREASMAALLIHAISAIIIIAFTIVHVWMATVLSEGGMECMVSGYCDENWAVQHHNL
WYDELKDSNSIAYKD

Specific function: Allows To Use Formate As Major Electron Donor During Aerobic Respiration. Subunit Gamma Is Probably The Cytochrome B556(Fdo) Component Of The Formate Dehydrogenase. [C]

COG id: COG2864

COG function: function code C; Cytochrome b subunit of formate dehydrogenase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.1.2

Molecular weight: Translated: 37070; Mature: 37070

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMKSLRSLFALLVIPLVLSMGLGLSASVMAADGQTNQQQVATNDVDLWRAVKSGESGYT
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHCCHHHHHHHHHCCCCCCC
TANNVEAGVLINVVGNEGKDIRNEYLIPVMGITVVAVFAAFLFFYLVNGPSKLSKGFSGK
CCCCCCCCEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
MVLRWSKADLWIHWVLATSCLALIFTGLNIMLGKYILQPYIGEGLWAGLIYGSKTIHDWV
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHH
GPVFIVSWILCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEKMWFW
HHHHHHHHHHHHHHHCCCCHHHHHCEEEEEEECCCEECCCCCCCCCCCCCCCCCCHHHHH
TLTIFGLFIAASGLMLVLPGLDLPREASMAALLIHAISAIIIIAFTIVHVWMATVLSEGG
HHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MECMVSGYCDENWAVQHHNLWYDELKDSNSIAYKD
CEEEEECCCCCCCCEEECCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MFMKSLRSLFALLVIPLVLSMGLGLSASVMAADGQTNQQQVATNDVDLWRAVKSGESGYT
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHCCHHHHHHHHHCCCCCCC
TANNVEAGVLINVVGNEGKDIRNEYLIPVMGITVVAVFAAFLFFYLVNGPSKLSKGFSGK
CCCCCCCCEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
MVLRWSKADLWIHWVLATSCLALIFTGLNIMLGKYILQPYIGEGLWAGLIYGSKTIHDWV
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHH
GPVFIVSWILCVVKWMPLQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEKMWFW
HHHHHHHHHHHHHHHCCCCHHHHHCEEEEEEECCCEECCCCCCCCCCCCCCCCCCHHHHH
TLTIFGLFIAASGLMLVLPGLDLPREASMAALLIHAISAIIIIAFTIVHVWMATVLSEGG
HHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MECMVSGYCDENWAVQHHNLWYDELKDSNSIAYKD
CEEEEECCCCCCCCEEECCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; NAD+

Specific reaction: formate + NAD+ = CO2 + NADH

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA