Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622042

Identifier: 167622042

GI number: 167622042

Start: 112841

End: 113503

Strand: Direct

Name: 167622042

Synonym: Shal_0101

Alternate gene names: NA

Gene position: 112841-113503 (Clockwise)

Preceding gene: 167622041

Following gene: 167622043

Centisome position: 2.16

GC content: 48.72

Gene sequence:

>663_bases
ATGAGCGGATTTTTATCTCGCTGGAATCTGCGAAAGCAGCAAGTAGAGGCTGAAGGCGAAGCAGAAGTTGCCGCGGCTGA
AGCTGCTGCACAACAACTCGCCGAAGAGCAGGCGCTTACAGCACAAAAGCAAGCTGAAGCGGAGCAGTCTACAGCGCAGG
ATTCAACTCAAACGATTGAAAATGCACAAGTAGAAGCGGATGCCGATAGAATCTTAACTGCTGAAGATCTACCTGATCCT
GAGAAGATTGAAGTCGGTGGTAGTTTTGCCAGCTTTATGGGCGCTAACGTTGACCCAGCAGCTAAGTCCGCCGCGTTAAA
GGCGCTCTGGAAACAGCCTCACTACAGTGAGATTGATGGCTTGCTTGAATATGCGCTCGATTACAGCAATCAGCCTAAAT
TGTCGGCCGAAGTCTCAGCGGAGTTAGCTAAAAAAGTATTCCGATACATGGTCAAAGATGAAGACGATGAAGAGGGAACG
CAAGAGGGAACGCAAGAGGGAGTTGAGGCTGCATCAGATGAGATGATTGCCGCTGAGAACTCCGATCAAAATGAACGCCT
TAATGATGCAGATTCTGTGTCGGACATTTTGGACGGTCACCAAGACAACGTGACCCAAAATGAACCAGAAAGCAGCGACG
CTTCGACGAGTAAAGTTGTTTAA

Upstream 100 bases:

>100_bases
TTACTCGTCATGGTGAAGTCGAAATCTGCGCTCATCGTCGTAAGCATGTTAACCGTCGCAAGAATGAAGGCCCTAGTACC
GATCATACGGCGGATAGAGC

Downstream 100 bases:

>100_bases
CGTTACTATAGAGTGTTTTAAATTCCACAAATTTGGTATGTGAATTGCTGTAATAGAGTGTAATTAATAGCTGGCGCTAA
TAAAAAGAGCGAAATAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSGFLSRWNLRKQQVEAEGEAEVAAAEAAAQQLAEEQALTAQKQAEAEQSTAQDSTQTIENAQVEADADRILTAEDLPDP
EKIEVGGSFASFMGANVDPAAKSAALKALWKQPHYSEIDGLLEYALDYSNQPKLSAEVSAELAKKVFRYMVKDEDDEEGT
QEGTQEGVEAASDEMIAAENSDQNERLNDADSVSDILDGHQDNVTQNEPESSDASTSKVV

Sequences:

>Translated_220_residues
MSGFLSRWNLRKQQVEAEGEAEVAAAEAAAQQLAEEQALTAQKQAEAEQSTAQDSTQTIENAQVEADADRILTAEDLPDP
EKIEVGGSFASFMGANVDPAAKSAALKALWKQPHYSEIDGLLEYALDYSNQPKLSAEVSAELAKKVFRYMVKDEDDEEGT
QEGTQEGVEAASDEMIAAENSDQNERLNDADSVSDILDGHQDNVTQNEPESSDASTSKVV
>Mature_219_residues
SGFLSRWNLRKQQVEAEGEAEVAAAEAAAQQLAEEQALTAQKQAEAEQSTAQDSTQTIENAQVEADADRILTAEDLPDPE
KIEVGGSFASFMGANVDPAAKSAALKALWKQPHYSEIDGLLEYALDYSNQPKLSAEVSAELAKKVFRYMVKDEDDEEGTQ
EGTQEGVEAASDEMIAAENSDQNERLNDADSVSDILDGHQDNVTQNEPESSDASTSKVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23757; Mature: 23625

Theoretical pI: Translated: 3.81; Mature: 3.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGFLSRWNLRKQQVEAEGEAEVAAAEAAAQQLAEEQALTAQKQAEAEQSTAQDSTQTIE
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAQVEADADRILTAEDLPDPEKIEVGGSFASFMGANVDPAAKSAALKALWKQPHYSEIDG
HHHHHCCHHHEEECCCCCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH
LLEYALDYSNQPKLSAEVSAELAKKVFRYMVKDEDDEEGTQEGTQEGVEAASDEMIAAEN
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEECCC
SDQNERLNDADSVSDILDGHQDNVTQNEPESSDASTSKVV
CCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGFLSRWNLRKQQVEAEGEAEVAAAEAAAQQLAEEQALTAQKQAEAEQSTAQDSTQTIE
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAQVEADADRILTAEDLPDPEKIEVGGSFASFMGANVDPAAKSAALKALWKQPHYSEIDG
HHHHHCCHHHEEECCCCCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHH
LLEYALDYSNQPKLSAEVSAELAKKVFRYMVKDEDDEEGTQEGTQEGVEAASDEMIAAEN
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEEECCC
SDQNERLNDADSVSDILDGHQDNVTQNEPESSDASTSKVV
CCCHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA