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The map label for this gene is yrdB [H]

Identifier: 167621977

GI number: 167621977

Start: 40614

End: 40892

Strand: Direct

Name: yrdB [H]

Synonym: Shal_0036

Alternate gene names: 167621977

Gene position: 40614-40892 (Clockwise)

Preceding gene: 167621976

Following gene: 167621979

Centisome position: 0.78

GC content: 40.14

Gene sequence:

>279_bases
ATGAACCAAAGTATTCTATTTCCGGATCTGCAAGATTGGGATCAACAAAGCCAAACCATTATTTTCCCGGCACAAGTGCA
AGGGGCTAATGTCGAGTGTCGAATTAGCTTAGCAAAACTCACATCATTGTCATCAGCAACGATAAAGCCAGATGAGCAAG
ATATTGAGAGTAAGGTACTAGCCTTATTTGATGAATATCGATTTGATATAGAGGAAGAGGTTGAAGCTCTCATCGAACAG
GAGGCGTTCGATGAGCAAGGTAAAGTTATTCTTTTATAG

Upstream 100 bases:

>100_bases
CATTTGGCGCAAGGTGACACCCAGTGTTGAGCCTGTTCTGGCTCAGCTTAGATCAGAACTCATAGGCTAAACGAAAGTCA
GAGCTTTAATCGAGATAAAG

Downstream 100 bases:

>100_bases
CGGCTTTATATAGGAGATATAGGAAGCTATGTCGTTAACCCTTGTTTACTCACCTTCTTGCAAATATTCATTCTTCAGCC
TGACATAATTGTCAGCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MNQSILFPDLQDWDQQSQTIIFPAQVQGANVECRISLAKLTSLSSATIKPDEQDIESKVLALFDEYRFDIEEEVEALIEQ
EAFDEQGKVILL

Sequences:

>Translated_92_residues
MNQSILFPDLQDWDQQSQTIIFPAQVQGANVECRISLAKLTSLSSATIKPDEQDIESKVLALFDEYRFDIEEEVEALIEQ
EAFDEQGKVILL
>Mature_92_residues
MNQSILFPDLQDWDQQSQTIIFPAQVQGANVECRISLAKLTSLSSATIKPDEQDIESKVLALFDEYRFDIEEEVEALIEQ
EAFDEQGKVILL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789674, Length=91, Percent_Identity=38.4615384615385, Blast_Score=68, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009962 [H]

Pfam domain/function: PF07369 DUF1488 [H]

EC number: NA

Molecular weight: Translated: 10475; Mature: 10475

Theoretical pI: Translated: 3.72; Mature: 3.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSILFPDLQDWDQQSQTIIFPAQVQGANVECRISLAKLTSLSSATIKPDEQDIESKVL
CCCCCCCCCCCCCCCCCCEEEEECEECCCCEEEEEEHHHHCCCCCCCCCCCHHHHHHHHH
ALFDEYRFDIEEEVEALIEQEAFDEQGKVILL
HHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEC
>Mature Secondary Structure
MNQSILFPDLQDWDQQSQTIIFPAQVQGANVECRISLAKLTSLSSATIKPDEQDIESKVL
CCCCCCCCCCCCCCCCCCEEEEECEECCCCEEEEEEHHHHCCCCCCCCCCCHHHHHHHHH
ALFDEYRFDIEEEVEALIEQEAFDEQGKVILL
HHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]