| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16753066
GI number: 16753066
Start: 21728
End: 22996
Strand: Direct
Name: Not Available
Synonym: CP0017
Alternate gene names: NA
Gene position: 21728-22996 (Clockwise)
Preceding gene: 16752311
Following gene: 16752312
Centisome position: 1.77
GC content: 39.24
Gene sequence:
>1269_bases ATGAAAAAACAGGTATATCAATGGTTAGCGAGTGTGGTTCTTTTAGCGCTGACAATTTCAGGATACGCTGAACTTCCTCT CTCGGAACAAAAAGTAAAAAGTCACACTTATACAACTTTAGACGAAGTCAAAGACTACTTAAGTAAACGGGGTTTTGTAG AAACGCGAAAGCAAGATGGCGTTTTAAGAATAGCAGGAGATGTTAGAGCCCGGTGGTTGTATTTCAGAGAAGATATCAAA AACCCCTCAGATAAAGATAAATACAATCCCTTACCAGTAAATCGTTATCGTAGTGAATTTTATCTCTATATTGATTATCG CGCTGAGAGGAACTGGCTGTCTTCAAAGATGAATTGGACAGCAATTGCAGGAGGGGAAAACACTGCAGCTGGTGTTGATA TCAACAGAGCATTTCTAGGATATCGTTTTTATAAGAATCCCGAAACACGTACAGATTTCTTTATGGAAATCGGACGTTCT GGTTTAGGAGATCTCTTTGAGTCAGAAGTCCAATTCCAAAGTAATTTTGACGGACTACATATATATTGGACTCGAGAACT TTCTAAGGACTATCCTTATCAAGTGATTGTTCATGGAGGTCCTTTCGTCGTGAACATGACAAAAAAACATTATGCTTGGG TTGTAGAAGGGATTCTCAATCGTTTGCCTAAACAGTTTTTTGTGAAATGTAGTGTTGTCGACTGGAACACATTCGTTCCT TCAGAAACCTCCACTACAGAAAAAGCTGCTACAAACGCTATGAAATACAAATACTGTGTTTGGCAGTGGCTCGTCGGAAA GCATAGTCAGGTTCCTTGGATCAATGGACAGAAAAAGCCTCTATATCTTTATGGAGCTTTCTTAATGAACCCTTTAGCAA AGGCTACGAAGACTACGTTAAATGGAAAAGAAAACCTAGCTTGGTTTATTGGAGGAACTTTAGGGGGACTCAGAAAAGCT GGAGACTGGTCTGCCACAGTACGTTATGAGTATGTCGAAGCCTTGTCGGTTCCAGAAATAGATGTTTCAGGGATTGGCCG TGGTAATTTATTAAAGTTTTGGTTCGCCCAAGCAATTGCTGCTAACTATGATCCTAAAGAGGCTAATGGTTTTACAAATT ATAAAGGATTTTCCGCTCTATATATGTATGGCATCACAGATTCTCTATCATTCAGAGCTTATGGGGCTTACTCCAAACCA GCAAACGATAAACTCGGCAGTGATTTTACTTTCCGAAAGTTTGATCTAGGTATAATTTCAGCGTTTTAA
Upstream 100 bases:
>100_bases ATGTTTGTTTCTTGTAGCTCAGTCGCTTTCTTTTAGCTTTAAGTTTTGATAGCCTGCTTGGTCTTCTGTTTCTACACTTA ATATTGATACTAAGGATACT
Downstream 100 bases:
>100_bases GTCAAATTTTAATAAAATCTTTAAAAACAGGCTCGCATTAATTATTAGTGAGAGCTTTTTTTTTATTTTTTATAATAAAA CTAAAAGATTTTTATTATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MKKQVYQWLASVVLLALTISGYAELPLSEQKVKSHTYTTLDEVKDYLSKRGFVETRKQDGVLRIAGDVRARWLYFREDIK NPSDKDKYNPLPVNRYRSEFYLYIDYRAERNWLSSKMNWTAIAGGENTAAGVDINRAFLGYRFYKNPETRTDFFMEIGRS GLGDLFESEVQFQSNFDGLHIYWTRELSKDYPYQVIVHGGPFVVNMTKKHYAWVVEGILNRLPKQFFVKCSVVDWNTFVP SETSTTEKAATNAMKYKYCVWQWLVGKHSQVPWINGQKKPLYLYGAFLMNPLAKATKTTLNGKENLAWFIGGTLGGLRKA GDWSATVRYEYVEALSVPEIDVSGIGRGNLLKFWFAQAIAANYDPKEANGFTNYKGFSALYMYGITDSLSFRAYGAYSKP ANDKLGSDFTFRKFDLGIISAF
Sequences:
>Translated_422_residues MKKQVYQWLASVVLLALTISGYAELPLSEQKVKSHTYTTLDEVKDYLSKRGFVETRKQDGVLRIAGDVRARWLYFREDIK NPSDKDKYNPLPVNRYRSEFYLYIDYRAERNWLSSKMNWTAIAGGENTAAGVDINRAFLGYRFYKNPETRTDFFMEIGRS GLGDLFESEVQFQSNFDGLHIYWTRELSKDYPYQVIVHGGPFVVNMTKKHYAWVVEGILNRLPKQFFVKCSVVDWNTFVP SETSTTEKAATNAMKYKYCVWQWLVGKHSQVPWINGQKKPLYLYGAFLMNPLAKATKTTLNGKENLAWFIGGTLGGLRKA GDWSATVRYEYVEALSVPEIDVSGIGRGNLLKFWFAQAIAANYDPKEANGFTNYKGFSALYMYGITDSLSFRAYGAYSKP ANDKLGSDFTFRKFDLGIISAF >Mature_422_residues MKKQVYQWLASVVLLALTISGYAELPLSEQKVKSHTYTTLDEVKDYLSKRGFVETRKQDGVLRIAGDVRARWLYFREDIK NPSDKDKYNPLPVNRYRSEFYLYIDYRAERNWLSSKMNWTAIAGGENTAAGVDINRAFLGYRFYKNPETRTDFFMEIGRS GLGDLFESEVQFQSNFDGLHIYWTRELSKDYPYQVIVHGGPFVVNMTKKHYAWVVEGILNRLPKQFFVKCSVVDWNTFVP SETSTTEKAATNAMKYKYCVWQWLVGKHSQVPWINGQKKPLYLYGAFLMNPLAKATKTTLNGKENLAWFIGGTLGGLRKA GDWSATVRYEYVEALSVPEIDVSGIGRGNLLKFWFAQAIAANYDPKEANGFTNYKGFSALYMYGITDSLSFRAYGAYSKP ANDKLGSDFTFRKFDLGIISAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48374; Mature: 48374
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQVYQWLASVVLLALTISGYAELPLSEQKVKSHTYTTLDEVKDYLSKRGFVETRKQDG CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCC VLRIAGDVRARWLYFREDIKNPSDKDKYNPLPVNRYRSEFYLYIDYRAERNWLSSKMNWT EEEEECCHHHHHHEEHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHCCCCEE AIAGGENTAAGVDINRAFLGYRFYKNPETRTDFFMEIGRSGLGDLFESEVQFQSNFDGLH EEECCCCCCCCCEEHHHHEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEE IYWTRELSKDYPYQVIVHGGPFVVNMTKKHYAWVVEGILNRLPKQFFVKCSVVDWNTFVP EEEEECCCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHCCHHHEEEEEEEECCCCCC SETSTTEKAATNAMKYKYCVWQWLVGKHSQVPWINGQKKPLYLYGAFLMNPLAKATKTTL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHC NGKENLAWFIGGTLGGLRKAGDWSATVRYEYVEALSVPEIDVSGIGRGNLLKFWFAQAIA CCCCCEEEEECCCHHCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHH ANYDPKEANGFTNYKGFSALYMYGITDSLSFRAYGAYSKPANDKLGSDFTFRKFDLGIIS CCCCCHHCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEECCEEEE AF CC >Mature Secondary Structure MKKQVYQWLASVVLLALTISGYAELPLSEQKVKSHTYTTLDEVKDYLSKRGFVETRKQDG CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCC VLRIAGDVRARWLYFREDIKNPSDKDKYNPLPVNRYRSEFYLYIDYRAERNWLSSKMNWT EEEEECCHHHHHHEEHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCHHHCCCCEE AIAGGENTAAGVDINRAFLGYRFYKNPETRTDFFMEIGRSGLGDLFESEVQFQSNFDGLH EEECCCCCCCCCEEHHHHEEEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEE IYWTRELSKDYPYQVIVHGGPFVVNMTKKHYAWVVEGILNRLPKQFFVKCSVVDWNTFVP EEEEECCCCCCCEEEEEECCCEEEEECHHHHHHHHHHHHHHCCHHHEEEEEEEECCCCCC SETSTTEKAATNAMKYKYCVWQWLVGKHSQVPWINGQKKPLYLYGAFLMNPLAKATKTTL CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHC NGKENLAWFIGGTLGGLRKAGDWSATVRYEYVEALSVPEIDVSGIGRGNLLKFWFAQAIA CCCCCEEEEECCCHHCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCCCCHHHHHHHHHHH ANYDPKEANGFTNYKGFSALYMYGITDSLSFRAYGAYSKPANDKLGSDFTFRKFDLGIIS CCCCCHHCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCEEEEECCEEEE AF CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA