Definition Chlamydophila pneumoniae AR39, complete genome.
Accession NC_002179
Length 1,229,853

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Identifier: 16752311

GI number: 16752311

Start: 19982

End: 21625

Strand: Direct

Name: Not Available

Synonym: CP0016

Alternate gene names: 16752311

Gene position: 19982-21625 (Clockwise)

Preceding gene: 16752308

Following gene: 16753066

Centisome position: 1.62

GC content: 41.0

Gene sequence:

>1644_bases
ATGAGCAGAAAAGACAATGAGGTTTCCTTAGCTCGTTCAATTTTTAATATATTATCCGGAACTTTCTGTAGTCGTATTAC
AGGGATATTTCGAGAAATTGCAATGGCAACCTATTTTGGAGCTGATCCAATTGTAGCTGCTTTCTGGTTAGGTTTCCGTA
CTGTTTTTTTCTTAAGAAAAATTTTAGGAGGGCTCATTCTAGAACAAGCCTTCATCCCTCATTTTGAATTTCTCCGTGCT
CAAAGTCTCGATCGTGCGGCGTTTTTTTTCCGACGCTTTTCTAGATTGATTAAAGGCAGCACTATTATATTCACTCTGCT
TATTGAAGCAGTATTGTGGGTAGTTCTTCAATACGTTGAAGAGGGGACTTACGATATGATTCTCCTTACTATGATACTCT
TGCCCTGTGGCATTTTCTTAATGATGTACAATGTAAACGGCGCTTTGCTTCACTGTGAAAATAAGTTTTTCGGGGTGGGA
TTAGCTCCCGTAGTTGTAAATATCATTTGGATTTTCTTTGTTATAGCGGCTCGTCATTCAGATCCTAGAGAGCGTATTAT
CGGTTTATCCGTGGCTCTAGTTATCGGGTTTTTCTTCGAATGGTTAATCACGGTTCCTGGAGTATGGAAATTTCTATTAG
AAGCGAAGAGCCCACCTCAAGAACACGATAGTGTTCGAGCTTTATTAGCTCCCTTATCTTTGGGTATTTTAACTTCAAGC
ATCTTCCAGCTGAACCTTCTTTCTGATATCTGCTTGGCTCGCTATGTACATGAAATAGGCCCTCTATATCTTATGTACTC
CTTAAAGATTTATCAGCTCCCCATACATCTCTTTGGCTTTGGTGTGTTTACCGTTCTCCTCCCAGCAATTTCTCGTTGTG
TACAGCGAGAAGATCATGAGAGGGGATTGAAACTTATGAAGTTCGTTCTCACCCTAACCATGTCCGTAATGATCATTATG
ACAGCAGGGCTATTGCTCTTAGCTTTACCTGGAGTCCGTGTCCTTTATGAACACGGACTTTTCCCTCAGAGTGCTGTCTA
CGCTATTGTTCGTGTATTGCGAGGTTATGGTGCCAGTATTATCCCTATGGCCTTGGCTCCTTTAGTCTCTGTTCTTTTTT
ATGCACAGCGGCAGTATGCTGTTCCGCTCTTTATAGGAATCGGTACGGCTTTGGCCAATATTGTTTTAAGCTTGGTTCTA
GGTCGTTGGGTTTTAAAAGACGTCTCGGGCATTTCCTATGCTACATCCATAACTGCTTGGGTGCAGTTATATTTCCTCTG
GTATTATTCTTCGAAAAGACTCCCTATGTACTCTAAGTTACTTTGGGAGAGCATCCGGCGTTCCATAAAAGTTATGGGAA
CCACTATGCTTGCTTGTATGATTACTCTAGGCTTAAATATCCTTACGCAAACTACATATGTAATTTTCTTAAACCCCCTC
ACACCACTTGCTTGGCCCTTATCCTCCATAACGGCTCAAGCAATTGCTTTTTTATCTGAGAGCTGCATTTTCTTGGCTTT
TTTGTTTGGTTTTGCAAAACTGCTTCGAGTAGAAGATCTTATTAATTTGGCTTCTTTTGAATACTGGCGTGGGCAACGGG
GTCTTTTGCAAAGACAACACGTGATGCAAGACACTCAAAATTAA

Upstream 100 bases:

>100_bases
TAGCTTGAAATAGCTTCCTCCAATTGTGATTTCTGAAGAAGTATAGGGGGAAATGTCGAAGAGATAGTCTTGTTTTAAAG
GAGGAGGGGAAAACGGTTTA

Downstream 100 bases:

>100_bases
TCATGTTTGTTTCTTGTAGCTCAGTCGCTTTCTTTTAGCTTTAAGTTTTGATAGCCTGCTTGGTCTTCTGTTTCTACACT
TAATATTGATACTAAGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 546

Protein sequence:

>547_residues
MSRKDNEVSLARSIFNILSGTFCSRITGIFREIAMATYFGADPIVAAFWLGFRTVFFLRKILGGLILEQAFIPHFEFLRA
QSLDRAAFFFRRFSRLIKGSTIIFTLLIEAVLWVVLQYVEEGTYDMILLTMILLPCGIFLMMYNVNGALLHCENKFFGVG
LAPVVVNIIWIFFVIAARHSDPRERIIGLSVALVIGFFFEWLITVPGVWKFLLEAKSPPQEHDSVRALLAPLSLGILTSS
IFQLNLLSDICLARYVHEIGPLYLMYSLKIYQLPIHLFGFGVFTVLLPAISRCVQREDHERGLKLMKFVLTLTMSVMIIM
TAGLLLLALPGVRVLYEHGLFPQSAVYAIVRVLRGYGASIIPMALAPLVSVLFYAQRQYAVPLFIGIGTALANIVLSLVL
GRWVLKDVSGISYATSITAWVQLYFLWYYSSKRLPMYSKLLWESIRRSIKVMGTTMLACMITLGLNILTQTTYVIFLNPL
TPLAWPLSSITAQAIAFLSESCIFLAFLFGFAKLLRVEDLINLASFEYWRGQRGLLQRQHVMQDTQN

Sequences:

>Translated_547_residues
MSRKDNEVSLARSIFNILSGTFCSRITGIFREIAMATYFGADPIVAAFWLGFRTVFFLRKILGGLILEQAFIPHFEFLRA
QSLDRAAFFFRRFSRLIKGSTIIFTLLIEAVLWVVLQYVEEGTYDMILLTMILLPCGIFLMMYNVNGALLHCENKFFGVG
LAPVVVNIIWIFFVIAARHSDPRERIIGLSVALVIGFFFEWLITVPGVWKFLLEAKSPPQEHDSVRALLAPLSLGILTSS
IFQLNLLSDICLARYVHEIGPLYLMYSLKIYQLPIHLFGFGVFTVLLPAISRCVQREDHERGLKLMKFVLTLTMSVMIIM
TAGLLLLALPGVRVLYEHGLFPQSAVYAIVRVLRGYGASIIPMALAPLVSVLFYAQRQYAVPLFIGIGTALANIVLSLVL
GRWVLKDVSGISYATSITAWVQLYFLWYYSSKRLPMYSKLLWESIRRSIKVMGTTMLACMITLGLNILTQTTYVIFLNPL
TPLAWPLSSITAQAIAFLSESCIFLAFLFGFAKLLRVEDLINLASFEYWRGQRGLLQRQHVMQDTQN
>Mature_546_residues
SRKDNEVSLARSIFNILSGTFCSRITGIFREIAMATYFGADPIVAAFWLGFRTVFFLRKILGGLILEQAFIPHFEFLRAQ
SLDRAAFFFRRFSRLIKGSTIIFTLLIEAVLWVVLQYVEEGTYDMILLTMILLPCGIFLMMYNVNGALLHCENKFFGVGL
APVVVNIIWIFFVIAARHSDPRERIIGLSVALVIGFFFEWLITVPGVWKFLLEAKSPPQEHDSVRALLAPLSLGILTSSI
FQLNLLSDICLARYVHEIGPLYLMYSLKIYQLPIHLFGFGVFTVLLPAISRCVQREDHERGLKLMKFVLTLTMSVMIIMT
AGLLLLALPGVRVLYEHGLFPQSAVYAIVRVLRGYGASIIPMALAPLVSVLFYAQRQYAVPLFIGIGTALANIVLSLVLG
RWVLKDVSGISYATSITAWVQLYFLWYYSSKRLPMYSKLLWESIRRSIKVMGTTMLACMITLGLNILTQTTYVIFLNPLT
PLAWPLSSITAQAIAFLSESCIFLAFLFGFAKLLRVEDLINLASFEYWRGQRGLLQRQHVMQDTQN

Specific function: Unknown

COG id: COG0728

COG function: function code R; Uncharacterized membrane protein, putative virulence factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mviN family

Homologues:

Organism=Escherichia coli, GI1787309, Length=395, Percent_Identity=24.5569620253165, Blast_Score=92, Evalue=9e-20,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): MVIN_CHLPN (Q9Z7H5)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   F72042
- PIR:   G86581
- RefSeq:   NP_224926.1
- RefSeq:   NP_300786.1
- RefSeq:   NP_444568.1
- RefSeq:   NP_877030.1
- GeneID:   1467437
- GeneID:   895572
- GeneID:   919497
- GeneID:   963638
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0016
- KEGG:   cpn:CPn0730
- KEGG:   cpt:CpB0758
- TIGR:   CP_0016
- HOGENOM:   HBG414149
- OMA:   REIAMAT
- ProtClustDB:   CLSK2391193
- BioCyc:   CPNE115711:CP_0016-MONOMER
- BioCyc:   CPNE115713:CPN0730-MONOMER
- BioCyc:   CPNE138677:CPJ0730-MONOMER
- BioCyc:   CPNE182082:CPB0758-MONOMER
- InterPro:   IPR004268
- PRINTS:   PR01806

Pfam domain/function: PF03023 MVIN

EC number: NA

Molecular weight: Translated: 61894; Mature: 61763

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x91f9ed4)-; HASH(0x9468648)-; HASH(0xae2f898)-; HASH(0xae87e80)-; HASH(0x94695b4)-; HASH(0x9467a6c)-; HASH(0xb89871c)-; HASH(0xb903fec)-; HASH(0x9467c58)-; HASH(0xae65914)-; HASH(0x9466140)-; HASH(0xaee46b0)-; HASH(0xae6d3a0)-; HASH(0x946a07c)-;

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRKDNEVSLARSIFNILSGTFCSRITGIFREIAMATYFGADPIVAAFWLGFRTVFFLRK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
ILGGLILEQAFIPHFEFLRAQSLDRAAFFFRRFSRLIKGSTIIFTLLIEAVLWVVLQYVE
HHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EGTYDMILLTMILLPCGIFLMMYNVNGALLHCENKFFGVGLAPVVVNIIWIFFVIAARHS
CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCC
DPRERIIGLSVALVIGFFFEWLITVPGVWKFLLEAKSPPQEHDSVRALLAPLSLGILTSS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
IFQLNLLSDICLARYVHEIGPLYLMYSLKIYQLPIHLFGFGVFTVLLPAISRCVQREDHE
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
RGLKLMKFVLTLTMSVMIIMTAGLLLLALPGVRVLYEHGLFPQSAVYAIVRVLRGYGASI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCHH
IPMALAPLVSVLFYAQRQYAVPLFIGIGTALANIVLSLVLGRWVLKDVSGISYATSITAW
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VQLYFLWYYSSKRLPMYSKLLWESIRRSIKVMGTTMLACMITLGLNILTQTTYVIFLNPL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC
TPLAWPLSSITAQAIAFLSESCIFLAFLFGFAKLLRVEDLINLASFEYWRGQRGLLQRQH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VMQDTQN
HHHCCCH
>Mature Secondary Structure 
SRKDNEVSLARSIFNILSGTFCSRITGIFREIAMATYFGADPIVAAFWLGFRTVFFLRK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH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HHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362