| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
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Identifier: 16752311
GI number: 16752311
Start: 19982
End: 21625
Strand: Direct
Name: Not Available
Synonym: CP0016
Alternate gene names: 16752311
Gene position: 19982-21625 (Clockwise)
Preceding gene: 16752308
Following gene: 16753066
Centisome position: 1.62
GC content: 41.0
Gene sequence:
>1644_bases ATGAGCAGAAAAGACAATGAGGTTTCCTTAGCTCGTTCAATTTTTAATATATTATCCGGAACTTTCTGTAGTCGTATTAC AGGGATATTTCGAGAAATTGCAATGGCAACCTATTTTGGAGCTGATCCAATTGTAGCTGCTTTCTGGTTAGGTTTCCGTA CTGTTTTTTTCTTAAGAAAAATTTTAGGAGGGCTCATTCTAGAACAAGCCTTCATCCCTCATTTTGAATTTCTCCGTGCT CAAAGTCTCGATCGTGCGGCGTTTTTTTTCCGACGCTTTTCTAGATTGATTAAAGGCAGCACTATTATATTCACTCTGCT TATTGAAGCAGTATTGTGGGTAGTTCTTCAATACGTTGAAGAGGGGACTTACGATATGATTCTCCTTACTATGATACTCT TGCCCTGTGGCATTTTCTTAATGATGTACAATGTAAACGGCGCTTTGCTTCACTGTGAAAATAAGTTTTTCGGGGTGGGA TTAGCTCCCGTAGTTGTAAATATCATTTGGATTTTCTTTGTTATAGCGGCTCGTCATTCAGATCCTAGAGAGCGTATTAT CGGTTTATCCGTGGCTCTAGTTATCGGGTTTTTCTTCGAATGGTTAATCACGGTTCCTGGAGTATGGAAATTTCTATTAG AAGCGAAGAGCCCACCTCAAGAACACGATAGTGTTCGAGCTTTATTAGCTCCCTTATCTTTGGGTATTTTAACTTCAAGC ATCTTCCAGCTGAACCTTCTTTCTGATATCTGCTTGGCTCGCTATGTACATGAAATAGGCCCTCTATATCTTATGTACTC CTTAAAGATTTATCAGCTCCCCATACATCTCTTTGGCTTTGGTGTGTTTACCGTTCTCCTCCCAGCAATTTCTCGTTGTG TACAGCGAGAAGATCATGAGAGGGGATTGAAACTTATGAAGTTCGTTCTCACCCTAACCATGTCCGTAATGATCATTATG ACAGCAGGGCTATTGCTCTTAGCTTTACCTGGAGTCCGTGTCCTTTATGAACACGGACTTTTCCCTCAGAGTGCTGTCTA CGCTATTGTTCGTGTATTGCGAGGTTATGGTGCCAGTATTATCCCTATGGCCTTGGCTCCTTTAGTCTCTGTTCTTTTTT ATGCACAGCGGCAGTATGCTGTTCCGCTCTTTATAGGAATCGGTACGGCTTTGGCCAATATTGTTTTAAGCTTGGTTCTA GGTCGTTGGGTTTTAAAAGACGTCTCGGGCATTTCCTATGCTACATCCATAACTGCTTGGGTGCAGTTATATTTCCTCTG GTATTATTCTTCGAAAAGACTCCCTATGTACTCTAAGTTACTTTGGGAGAGCATCCGGCGTTCCATAAAAGTTATGGGAA CCACTATGCTTGCTTGTATGATTACTCTAGGCTTAAATATCCTTACGCAAACTACATATGTAATTTTCTTAAACCCCCTC ACACCACTTGCTTGGCCCTTATCCTCCATAACGGCTCAAGCAATTGCTTTTTTATCTGAGAGCTGCATTTTCTTGGCTTT TTTGTTTGGTTTTGCAAAACTGCTTCGAGTAGAAGATCTTATTAATTTGGCTTCTTTTGAATACTGGCGTGGGCAACGGG GTCTTTTGCAAAGACAACACGTGATGCAAGACACTCAAAATTAA
Upstream 100 bases:
>100_bases TAGCTTGAAATAGCTTCCTCCAATTGTGATTTCTGAAGAAGTATAGGGGGAAATGTCGAAGAGATAGTCTTGTTTTAAAG GAGGAGGGGAAAACGGTTTA
Downstream 100 bases:
>100_bases TCATGTTTGTTTCTTGTAGCTCAGTCGCTTTCTTTTAGCTTTAAGTTTTGATAGCCTGCTTGGTCTTCTGTTTCTACACT TAATATTGATACTAAGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MSRKDNEVSLARSIFNILSGTFCSRITGIFREIAMATYFGADPIVAAFWLGFRTVFFLRKILGGLILEQAFIPHFEFLRA QSLDRAAFFFRRFSRLIKGSTIIFTLLIEAVLWVVLQYVEEGTYDMILLTMILLPCGIFLMMYNVNGALLHCENKFFGVG LAPVVVNIIWIFFVIAARHSDPRERIIGLSVALVIGFFFEWLITVPGVWKFLLEAKSPPQEHDSVRALLAPLSLGILTSS IFQLNLLSDICLARYVHEIGPLYLMYSLKIYQLPIHLFGFGVFTVLLPAISRCVQREDHERGLKLMKFVLTLTMSVMIIM TAGLLLLALPGVRVLYEHGLFPQSAVYAIVRVLRGYGASIIPMALAPLVSVLFYAQRQYAVPLFIGIGTALANIVLSLVL GRWVLKDVSGISYATSITAWVQLYFLWYYSSKRLPMYSKLLWESIRRSIKVMGTTMLACMITLGLNILTQTTYVIFLNPL TPLAWPLSSITAQAIAFLSESCIFLAFLFGFAKLLRVEDLINLASFEYWRGQRGLLQRQHVMQDTQN
Sequences:
>Translated_547_residues MSRKDNEVSLARSIFNILSGTFCSRITGIFREIAMATYFGADPIVAAFWLGFRTVFFLRKILGGLILEQAFIPHFEFLRA QSLDRAAFFFRRFSRLIKGSTIIFTLLIEAVLWVVLQYVEEGTYDMILLTMILLPCGIFLMMYNVNGALLHCENKFFGVG LAPVVVNIIWIFFVIAARHSDPRERIIGLSVALVIGFFFEWLITVPGVWKFLLEAKSPPQEHDSVRALLAPLSLGILTSS IFQLNLLSDICLARYVHEIGPLYLMYSLKIYQLPIHLFGFGVFTVLLPAISRCVQREDHERGLKLMKFVLTLTMSVMIIM TAGLLLLALPGVRVLYEHGLFPQSAVYAIVRVLRGYGASIIPMALAPLVSVLFYAQRQYAVPLFIGIGTALANIVLSLVL GRWVLKDVSGISYATSITAWVQLYFLWYYSSKRLPMYSKLLWESIRRSIKVMGTTMLACMITLGLNILTQTTYVIFLNPL TPLAWPLSSITAQAIAFLSESCIFLAFLFGFAKLLRVEDLINLASFEYWRGQRGLLQRQHVMQDTQN >Mature_546_residues SRKDNEVSLARSIFNILSGTFCSRITGIFREIAMATYFGADPIVAAFWLGFRTVFFLRKILGGLILEQAFIPHFEFLRAQ SLDRAAFFFRRFSRLIKGSTIIFTLLIEAVLWVVLQYVEEGTYDMILLTMILLPCGIFLMMYNVNGALLHCENKFFGVGL APVVVNIIWIFFVIAARHSDPRERIIGLSVALVIGFFFEWLITVPGVWKFLLEAKSPPQEHDSVRALLAPLSLGILTSSI FQLNLLSDICLARYVHEIGPLYLMYSLKIYQLPIHLFGFGVFTVLLPAISRCVQREDHERGLKLMKFVLTLTMSVMIIMT AGLLLLALPGVRVLYEHGLFPQSAVYAIVRVLRGYGASIIPMALAPLVSVLFYAQRQYAVPLFIGIGTALANIVLSLVLG RWVLKDVSGISYATSITAWVQLYFLWYYSSKRLPMYSKLLWESIRRSIKVMGTTMLACMITLGLNILTQTTYVIFLNPLT PLAWPLSSITAQAIAFLSESCIFLAFLFGFAKLLRVEDLINLASFEYWRGQRGLLQRQHVMQDTQN
Specific function: Unknown
COG id: COG0728
COG function: function code R; Uncharacterized membrane protein, putative virulence factor
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mviN family
Homologues:
Organism=Escherichia coli, GI1787309, Length=395, Percent_Identity=24.5569620253165, Blast_Score=92, Evalue=9e-20,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): MVIN_CHLPN (Q9Z7H5)
Other databases:
- EMBL: AE001363 - EMBL: AE002161 - EMBL: BA000008 - EMBL: AE009440 - PIR: F72042 - PIR: G86581 - RefSeq: NP_224926.1 - RefSeq: NP_300786.1 - RefSeq: NP_444568.1 - RefSeq: NP_877030.1 - GeneID: 1467437 - GeneID: 895572 - GeneID: 919497 - GeneID: 963638 - GenomeReviews: AE001363_GR - GenomeReviews: AE002161_GR - GenomeReviews: AE009440_GR - GenomeReviews: BA000008_GR - KEGG: cpa:CP0016 - KEGG: cpn:CPn0730 - KEGG: cpt:CpB0758 - TIGR: CP_0016 - HOGENOM: HBG414149 - OMA: REIAMAT - ProtClustDB: CLSK2391193 - BioCyc: CPNE115711:CP_0016-MONOMER - BioCyc: CPNE115713:CPN0730-MONOMER - BioCyc: CPNE138677:CPJ0730-MONOMER - BioCyc: CPNE182082:CPB0758-MONOMER - InterPro: IPR004268 - PRINTS: PR01806
Pfam domain/function: PF03023 MVIN
EC number: NA
Molecular weight: Translated: 61894; Mature: 61763
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x91f9ed4)-; HASH(0x9468648)-; HASH(0xae2f898)-; HASH(0xae87e80)-; HASH(0x94695b4)-; HASH(0x9467a6c)-; HASH(0xb89871c)-; HASH(0xb903fec)-; HASH(0x9467c58)-; HASH(0xae65914)-; HASH(0x9466140)-; HASH(0xaee46b0)-; HASH(0xae6d3a0)-; HASH(0x946a07c)-;
Cys/Met content:
1.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKDNEVSLARSIFNILSGTFCSRITGIFREIAMATYFGADPIVAAFWLGFRTVFFLRK CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ILGGLILEQAFIPHFEFLRAQSLDRAAFFFRRFSRLIKGSTIIFTLLIEAVLWVVLQYVE HHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH EGTYDMILLTMILLPCGIFLMMYNVNGALLHCENKFFGVGLAPVVVNIIWIFFVIAARHS CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCC DPRERIIGLSVALVIGFFFEWLITVPGVWKFLLEAKSPPQEHDSVRALLAPLSLGILTSS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH IFQLNLLSDICLARYVHEIGPLYLMYSLKIYQLPIHLFGFGVFTVLLPAISRCVQREDHE HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH RGLKLMKFVLTLTMSVMIIMTAGLLLLALPGVRVLYEHGLFPQSAVYAIVRVLRGYGASI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCHH IPMALAPLVSVLFYAQRQYAVPLFIGIGTALANIVLSLVLGRWVLKDVSGISYATSITAW HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VQLYFLWYYSSKRLPMYSKLLWESIRRSIKVMGTTMLACMITLGLNILTQTTYVIFLNPL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC TPLAWPLSSITAQAIAFLSESCIFLAFLFGFAKLLRVEDLINLASFEYWRGQRGLLQRQH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VMQDTQN HHHCCCH >Mature Secondary Structure SRKDNEVSLARSIFNILSGTFCSRITGIFREIAMATYFGADPIVAAFWLGFRTVFFLRK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ILGGLILEQAFIPHFEFLRAQSLDRAAFFFRRFSRLIKGSTIIFTLLIEAVLWVVLQYVE HHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH EGTYDMILLTMILLPCGIFLMMYNVNGALLHCENKFFGVGLAPVVVNIIWIFFVIAARHS CCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCC DPRERIIGLSVALVIGFFFEWLITVPGVWKFLLEAKSPPQEHDSVRALLAPLSLGILTSS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH IFQLNLLSDICLARYVHEIGPLYLMYSLKIYQLPIHLFGFGVFTVLLPAISRCVQREDHE HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH RGLKLMKFVLTLTMSVMIIMTAGLLLLALPGVRVLYEHGLFPQSAVYAIVRVLRGYGASI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCHH IPMALAPLVSVLFYAQRQYAVPLFIGIGTALANIVLSLVLGRWVLKDVSGISYATSITAW HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH VQLYFLWYYSSKRLPMYSKLLWESIRRSIKVMGTTMLACMITLGLNILTQTTYVIFLNPL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC TPLAWPLSSITAQAIAFLSESCIFLAFLFGFAKLLRVEDLINLASFEYWRGQRGLLQRQH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VMQDTQN HHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362