| Definition | Chlamydophila pneumoniae AR39, complete genome. |
|---|---|
| Accession | NC_002179 |
| Length | 1,229,853 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 16752686
GI number: 16752686
Start: 441302
End: 442609
Strand: Direct
Name: Not Available
Synonym: CP0404
Alternate gene names: NA
Gene position: 441302-442609 (Clockwise)
Preceding gene: 16752685
Following gene: 16752693
Centisome position: 35.88
GC content: 38.99
Gene sequence:
>1308_bases TTGGCTATGAGCATGACGATCGTTCCACATGCTTTATTTAAAAATCATTGCGAGTGTCATTCTACCTTTCCTTTGAGTTC AAGGACTATTGTAAGAATAGCCATTGCCAGCCTCTTTTGTATAGGTGCATTAGCAGCTTTAGGCTGTTTGGCTCCTCCCG TTTCTTATATTGTTGGGAGTGTTTTAGCTTTTATTGCCTTTGTCATTCTTTCTTTAGTAATTTTAGCTTTGATTTTTGGA GAGAAGAAGCTTCCACCAACACCAAGAATCATTCCTGATAGATTTACTCACGTGATAGATGAAGCTTATGGCCTTTCAAT CTCTGCATTTGTAAGAGAACAGCAGGTAACATTAGCCGAGTTTAGACAATTTTCTACTGCCCTGTTGTGTAACATATCTC CTGAAGAGAAAATCAAACAATTGCCTTCTGAATTGCGAAGTAAAGTAGAGAGTTTTGGTATTAGCAGGCTCGCAGGTGAT TTAGAAAAGAATAATTGGCCAATATTTGAAGATCTTTTAAGCCAAACCTGCCCGTTATATTGGCTTCAGAAATTTATATC AGCAGGAGATCCACAAGTTTGTAGAGACCTACGTGTCCCTAGAGAATGTTATGGGTACTATTGGCTAGGGCCTTTGGGAT ACAGTACAGCTAAGGCTACAATTTTTTGTAAAGAGACGCATCATATTCTTCAACAATTAACGAAAGAGGACGTTCTTTTA TTAAAAAACAAGGCTCTTCAAGAGAAATGGGATACTGATGAAGTCAAAGCAATTGTAGAGCGTATCTACACTACCTATAC GGCACGAGGAACTCTAAAGACCGAAGCAGGGGGACTTACAAAAGAGACAATCAGTAAGGAATTGCTATTGTTGAGCTTGC ATGGCTATTCTTTTGATCAGCTACAGCTGATCACTCAACTTCCTAGAGATGCTTGGGATTGGCTGTGTTTTGTAGATAAC AGTACCGCATACAACCTTCAGCTTTGTGCTCTTGTAGGAGCTTTGTCATCCCAAAATCTTCTTGACGAATCTTCTATCGA TTTTGATGTAAACCTAGGCCTGTATGTGATTCAGGATCTAAAAGAAGCTGTTCAAGCATTTTCTGCTTCTGATGAGCCAA AGAAAGAACTAGGTAAATTCTTGTTAAGGCATTTGAGTTCAGTTTCTAAGCGATTAGAGAGTGTATTAAGACAGGGTCTT CACAGAATAGCTCTAGAGCATGGAAATGCCAGAGCTAGGGTTTATGACGTCAATTTTGTAACAGGAGCTAGAATTCATAG GAAGACGAGTATCTTCTTTAAAGACTAA
Upstream 100 bases:
>100_bases GCTATTTTTCATGGGATTTTTTATTACAGGAAATTCTTGAATTAGAGATTTTTATTTACACATAATCTATACTGCCTTCA ATAGATCTATATCTAAGGAG
Downstream 100 bases:
>100_bases ACCAGGTAACTAGCTTTTTAGTCTCGAAAGGGGCTACGAGAGGGAGTAGAATTTTTCTTATTCCAAAATAGAAATCTCTA ACCTATCAGCAGGGAGGACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MAMSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVLAFIAFVILSLVILALIFG EKKLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGD LEKNNWPIFEDLLSQTCPLYWLQKFISAGDPQVCRDLRVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLL LKNKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQLITQLPRDAWDWLCFVDN STAYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGL HRIALEHGNARARVYDVNFVTGARIHRKTSIFFKD
Sequences:
>Translated_435_residues MAMSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVLAFIAFVILSLVILALIFG EKKLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGD LEKNNWPIFEDLLSQTCPLYWLQKFISAGDPQVCRDLRVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLL LKNKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQLITQLPRDAWDWLCFVDN STAYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGL HRIALEHGNARARVYDVNFVTGARIHRKTSIFFKD >Mature_434_residues AMSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVLAFIAFVILSLVILALIFGE KKLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDL EKNNWPIFEDLLSQTCPLYWLQKFISAGDPQVCRDLRVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLLL KNKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQLITQLPRDAWDWLCFVDNS TAYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLH RIALEHGNARARVYDVNFVTGARIHRKTSIFFKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48920; Mature: 48789
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGS CCCEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VLAFIAFVILSLVILALIFGEKKLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDLEKNNWPIFEDLLSQTCPLY HHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHH WLQKFISAGDPQVCRDLRVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLL HHHHHHCCCCHHHHHHCCCCHHHCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH LKNKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQ HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHEEEEECCCCHHH LQLITQLPRDAWDWLCFVDNSTAYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDL HHHHHHCCHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHH KEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLHRIALEHGNARARVYDVNFV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEE TGARIHRKTSIFFKD CCCHHHHCCEEEECC >Mature Secondary Structure AMSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGS CCEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH VLAFIAFVILSLVILALIFGEKKLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAE HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH FRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDLEKNNWPIFEDLLSQTCPLY HHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHH WLQKFISAGDPQVCRDLRVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLL HHHHHHCCCCHHHHHHCCCCHHHCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHH LKNKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQ HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHEEEEECCCCHHH LQLITQLPRDAWDWLCFVDNSTAYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDL HHHHHHCCHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHH KEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLHRIALEHGNARARVYDVNFV HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEE TGARIHRKTSIFFKD CCCHHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA